ggKbase home page

L3_122_123G1_scaffold_828

Search features with annotation key words

Displaying 10 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_828_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2..1240
DNA (1239bp) protein (413aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1679 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum.;"
S-adenosylmethionine synthase n=2 Tax=Bifidobacterium RepID=E8MV66_BIFL1
S-adenosylmethionine synthase
L3_122_123G1_scaffold_828_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1308..4595)
DNA (3288bp) protein (1096aa)
Type I site-specific deoxyribonuclease, HsdR family {ECO:0000313|EMBL:EEI80539.1}; EC=3.1.21.3 {ECO:0000313|EMBL:EEI80539.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Type I site-specific deoxyribonuclease, HsdR family n=2 Tax=Bifidobacterium longum subsp. longum RepID=C2GVT4_BIFLN
deoxyribonuclease
L3_122_123G1_scaffold_828_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4592..6139)
DNA (1548bp) protein (516aa)
Divergent AAA domain protein n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GVT3_BIFLN
Divergent AAA domain protein {ECO:0000313|EMBL:EEI80538.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
transcriptional regulator
L3_122_123G1_scaffold_828_4
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6154..7323)
DNA (1170bp) protein (390aa)
Restriction endonuclease S subunit n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HQY7_BIFBI
Restriction endonuclease S subunit {ECO:0000313|EMBL:EKE49848.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
Sau1hsdS1
L3_122_123G1_scaffold_828_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(7323..9890)
DNA (2568bp) protein (856aa)
Type I restriction-modification system, M subunit {ECO:0000313|EMBL:EEI80718.1}; EC=2.1.1.72 {ECO:0000313|EMBL:EEI80718.1};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Type I restriction-modification system, M subunit n=3 Tax=Bifidobacterium longum subsp. longum RepID=C2GVR9_BIFLN
DNA methylase
L3_122_123G1_scaffold_828_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9922..10857)
DNA (936bp) protein (312aa)
Restriction endonuclease n=5 Tax=Bifidobacterium longum RepID=B3DRM1_BIFLD
mrr; restriction endonuclease
Mrr restriction endonuclease {ECO:0000313|EMBL:AAN25564.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_123G1_scaffold_828_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10942..11415
DNA (474bp) protein (158aa)
Type I restriction modification DNA specificity domain protein n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GVR6_BIFLN
Type I restriction modification DNA specificity domain protein {ECO:0000313|EMBL:EEI80886.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
restriction modification system DNA specificity domain-containing protein
L3_122_123G1_scaffold_828_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11406..12335
DNA (930bp) protein (310aa)
Phage integrase n=5 Tax=Bifidobacterium RepID=E8MV72_BIFL1
phage integrase
Integrase {ECO:0000313|EMBL:KEY33541.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_123G1_scaffold_828_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12328..13029)
DNA (702bp) protein (234aa)
Type I restriction modification DNA specificity domain protein n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3BBN5_BIFLN
hsdS3; restriction endonuclease S subunit
Restriction endonuclease S subunit {ECO:0000313|EMBL:ACD99405.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_123G1_scaffold_828_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13229..13372)
DNA (144bp) protein (48aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02003, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02003}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
Isoleucine--tRNA ligase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8ATJ3_BIFLN
isoleucyl-tRNA synthase
Displaying 10 items

View Taxonomy