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L3_122_123G1_scaffold_886

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Displaying 17 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_886_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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1..294
DNA (294bp) protein (98aa)
Phosphohistidine phosphatase n=13 Tax=Bifidobacterium RepID=B3DS66_BIFLD
putative phosphohistidine phosphatase SixA
Phosphohistidine phosphatase {ECO:0000313|EMBL:ACD97985.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_123G1_scaffold_886_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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405..2708
DNA (2304bp) protein (768aa)
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00049969}; EC=2.1.1.14 {ECO:0000256|HAMAP-Rule:MF_00172, ECO:0000256|SAAS:SAAS00050077};; Cobalamin-independent methionine synthase {ECO:0000256|HAMAP-Rule:MF_00172}; Methionine synthase, vitamin-B12 independent isozyme {ECO:0000256|HAMAP-Rule:MF_00172}; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
5-methyltetrahydropteroyltriglutamate--homocysteine methyltransferase n=8 Tax=Bifidobacterium longum RepID=METE_BIFLD
metE; mete
L3_122_123G1_scaffold_886_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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2767..3621
DNA (855bp) protein (285aa)
5,10-methylenetetrahydrofolate reductase, prokaryotic form (EC:1.5.1.20)
Methylenetetrahydrofolate reductase {ECO:0000256|RuleBase:RU003862}; EC=1.5.1.20 {ECO:0000256|RuleBase:RU003862};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Methylenetetrahydrofolate reductase n=12 Tax=Bifidobacterium RepID=B3DS64_BIFLD
L3_122_123G1_scaffold_886_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3704..4708
DNA (1005bp) protein (335aa)
Penicillin V acylase and related amidases (EC:3.5.1.24)
Penicillin V acylase and related amidases {ECO:0000313|EMBL:CBK70551.1}; EC=3.5.1.24 {ECO:0000313|EMBL:CBK70551.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Penicillin V acylase and related amidases n=14 Tax=Bifidobacterium RepID=D6DDI0_BIFLN
L3_122_123G1_scaffold_886_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4764..7994
DNA (3231bp) protein (1077aa)
Glutamate-ammonia-ligase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015000}; EC=2.7.7.42 {ECO:0000256|HAMAP-Rule:MF_00802, ECO:0000256|SAAS:SAAS00015004};; Glutamine-synthase adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; [Glutamate--ammonia-ligase] adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00802}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
Glutamate-ammonia-ligase adenylyltransferase n=1 Tax=Bifidobacterium longum subsp. longum ATCC 55813 RepID=C2GX44_BIFLN
glutamate-ammonia-ligase adenylyltransferase
L3_122_123G1_scaffold_886_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8136..9098
DNA (963bp) protein (321aa)
Aspartate carbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_00001}; EC=2.1.3.2 {ECO:0000256|HAMAP-Rule:MF_00001};; Aspartate transcarbamylase {ECO:0000256|HAMAP-Rule:MF_00001}; TaxID=1457183 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis EK3.;"
Aspartate carbamoyltransferase n=3 Tax=Bifidobacterium longum subsp. longum RepID=I3AUB2_BIFLN
pyrB; aspartate carbamoyltransferase
L3_122_123G1_scaffold_886_7
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9098..9517
DNA (420bp) protein (140aa)
Aspartate transcarbamylase regulatory subunit n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MXM0_9BIFI
Aspartate transcarbamylase regulatory subunit {ECO:0000313|EMBL:CCY96485.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
pyrI; pyri
L3_122_123G1_scaffold_886_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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9514..11010
DNA (1497bp) protein (499aa)
Dihydroorotase {ECO:0000256|HAMAP-Rule:MF_00220, ECO:0000256|SAAS:SAAS00252556}; Short=DHOase {ECO:0000256|HAMAP-Rule:MF_00220};; EC=3.5.2.3 {ECO:0000256|HAMAP-Rule:MF_00220};; TaxID=1350473 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 17-1B.;"
Dihydroorotase n=11 Tax=Bifidobacterium RepID=E4R3N7_BIFLM
pyrC; pyrc
L3_122_123G1_scaffold_886_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11028..11732
DNA (705bp) protein (235aa)
Orotidine 5'-phosphate decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032256}; EC=4.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01215, ECO:0000256|SAAS:SAAS00032220};; OMP decarboxylase {ECO:0000256|HAMAP-Rule:MF_01215}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Orotidine 5'-phosphate decarboxylase n=10 Tax=Bifidobacterium RepID=B3DS58_BIFLD
orotidine 5'-phosphate decarboxylase
L3_122_123G1_scaffold_886_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

11868..12692
DNA (825bp) protein (275aa)
2-polyprenylphenol hydroxylase n=16 Tax=Bifidobacterium RepID=B3DS57_BIFLD
ubiB; ubib
Probable dihydroorotate dehydrogenase electron transfer subunit {ECO:0000313|EMBL:AAN24605.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_122_123G1_scaffold_886_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12680..13663
DNA (984bp) protein (328aa)
Dihydroorotate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00224}; Short=DHOD {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHODase {ECO:0000256|HAMAP-Rule:MF_00224};; Short=DHOdehase {ECO:0000256|HAMAP-Rule:MF_00224};; EC=1.3.-.- {ECO:0000256|HAMAP-Rule:MF_00224};; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
dihydroorotate oxidase B, catalytic subunit (EC:1.3.98.1)
Dihydroorotate dehydrogenase n=1 Tax=Bifidobacterium longum subsp. longum F8 RepID=D6DDH4_BIFLN
L3_122_123G1_scaffold_886_12
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13672..14367
DNA (696bp) protein (232aa)
orotate phosphoribosyltransferase (EC:2.4.2.10)
Orotate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216328}; Short=OPRT {ECO:0000256|HAMAP-Rule:MF_01208};; Short=OPRTase {ECO:0000256|HAMAP-Rule:MF_01208};; EC=2.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01208, ECO:0000256|SAAS:SAAS00216337};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
Orotate phosphoribosyltransferase n=15 Tax=Bifidobacterium RepID=PYRE_BIFLO
L3_122_123G1_scaffold_886_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

14843..15964
DNA (1122bp) protein (374aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G662_BIFLO
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV33520.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_122_123G1_scaffold_886_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16119..17042)
DNA (924bp) protein (308aa)
Fhu operon transcription regulator n=17 Tax=Bifidobacterium RepID=B3DS52_BIFLD
transcriptional regulator
LysR family transcriptional regulator {ECO:0000313|EMBL:KEY32929.1}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
L3_122_123G1_scaffold_886_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17144..17773)
DNA (630bp) protein (210aa)
Hydrolase n=16 Tax=Bifidobacterium RepID=F8AQJ0_BIFLN
hydrolase
Putative HAD superfamily hydrolase {ECO:0000313|EMBL:ACD97970.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_123G1_scaffold_886_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17874..19637)
DNA (1764bp) protein (588aa)
Uncharacterized protein n=15 Tax=Bifidobacterium RepID=B3DS50_BIFLD
Carbohydrate kinase {ECO:0000313|EMBL:AIW43754.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
carbohydrate kinase
L3_122_123G1_scaffold_886_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19677..20867)
DNA (1191bp) protein (397aa)
Aspartate/tyrosine/aromatic aminotransferase n=16 Tax=Bifidobacterium RepID=B3DS49_BIFLD
aspartate aminotransferase
Aspartate aminotransferase {ECO:0000313|EMBL:AIW43755.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Displaying 17 items

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