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L3_122_123G1_scaffold_898

Search features with annotation key words

Displaying 22 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_123G1_scaffold_898_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(195..671)
DNA (477bp) protein (159aa)
Transcriptional repressor NrdR n=1 Tax=Bifidobacterium longum subsp. infantis (strain ATCC 15697 / DSM 20088 / JCM 1222 / NCTC 11817 / S12) RepID=B7GQ66_BIFLS
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=216816 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum.;"
nrdR; transcriptional regulator NrdR
L3_122_123G1_scaffold_898_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(688..1038)
DNA (351bp) protein (117aa)
LysM-like protein n=1 Tax=Bifidobacterium longum (strain DJO10A) RepID=B3DQB5_BIFLD
lytE; LysM-like protein
LysM-like protein {ECO:0000313|EMBL:ACD97614.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_123G1_scaffold_898_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1189..1914
DNA (726bp) protein (242aa)
LexA repressor {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008101}; EC=3.4.21.88 {ECO:0000256|HAMAP-Rule:MF_00015, ECO:0000256|SAAS:SAAS00008054};; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
LexA repressor n=13 Tax=Bifidobacterium longum RepID=LEXA_BIFLD
lexA1; lexa1
L3_122_123G1_scaffold_898_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2080..3018
DNA (939bp) protein (313aa)
Cation diffusion facilitator family transporter n=4 Tax=Bifidobacterium longum RepID=C2GY67_BIFLN
cation efflux protein
Cation diffusion facilitator family transporter {ECO:0000313|EMBL:EEI79847.1}; TaxID=548480 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum ATCC 55813.;"
L3_122_123G1_scaffold_898_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3160..4122)
DNA (963bp) protein (321aa)
L-lactate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00488}; Short=L-LDH {ECO:0000256|HAMAP-Rule:MF_00488};; EC=1.1.1.27 {ECO:0000256|HAMAP-Rule:MF_00488};; TaxID=537937 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis CCUG 52486.;"
L-lactate dehydrogenase 2 n=19 Tax=Bifidobacterium RepID=LDH2_BIFL2
L-lactate dehydrogenase
L3_122_123G1_scaffold_898_6
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4303..5808)
DNA (1506bp) protein (502aa)
GTPase HflX n=2 Tax=Bifidobacterium RepID=D6ZV56_BIFLJ
small GTP-binding protein
GTPase HflX {ECO:0000256|HAMAP-Rule:MF_00900}; GTP-binding protein HflX {ECO:0000256|HAMAP-Rule:MF_00900}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
L3_122_123G1_scaffold_898_7
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5967..6623
DNA (657bp) protein (219aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=Q8G4R9_BIFLO
MFS transporter
Methyltransferase small domain-containing protein {ECO:0000313|EMBL:EFV36455.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_122_123G1_scaffold_898_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6613..10749
DNA (4137bp) protein (1379aa)
ATP-dependent helicase HrpA {ECO:0000313|EMBL:CBK70269.1}; EC=3.6.1.- {ECO:0000313|EMBL:CBK70269.1};; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
ATP-dependent helicase HrpA n=6 Tax=Bifidobacterium RepID=D6DCP8_BIFLN
ATP-dependent helicase
L3_122_123G1_scaffold_898_9
Bifidobacterium moukalabense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

10746..11486
DNA (741bp) protein (247aa)
Uncharacterized protein n=2 Tax=Bifidobacterium longum RepID=S3DIM8_BIFLN
hypothetical protein
Hemagglutinin {ECO:0000313|EMBL:ETY72281.1}; TaxID=1435051 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium moukalabense DSM 27321.;"
L3_122_123G1_scaffold_898_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11617..12003)
DNA (387bp) protein (129aa)
Transport protein n=2 Tax=Bifidobacterium longum RepID=F8AP62_BIFLN
transporter
Transporter, major facilitator domain protein {ECO:0000313|EMBL:EIJ21712.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_898_11
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12251..13588)
DNA (1338bp) protein (446aa)
Glutamine synthetase n=17 Tax=Bifidobacterium RepID=B3DQA6_BIFLD
glutamine synthase
Glutamine synthetase {ECO:0000313|EMBL:ACD97605.1}; TaxID=205913 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain DJO10A).;"
L3_122_123G1_scaffold_898_12
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

13725..15170
DNA (1446bp) protein (482aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium longum subsp. longum (strain JDM301) RepID=D6ZV67_BIFLJ
Uncharacterized protein {ECO:0000313|EMBL:CCY96190.1}; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
hypothetical protein
L3_122_123G1_scaffold_898_13
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15274..15999)
DNA (726bp) protein (242aa)
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; EC=5.3.1.16 {ECO:0000256|HAMAP-Rule:MF_01014};; Phosphoribosylformimino-5-aminoimidazole carboxamide ribotide isomerase {ECO:0000256|HAMAP-Rule:MF_01014}; TaxID=565042 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain ATCC 15707 / DSM 20219 /; JCM 1217 / NCTC 11818 / E194b).;"
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino)methylideneamino] imidazole-4-carboxamide isomerase n=6 Tax=Bifidobacterium longum RepID=HIS4_BIFLO
1-(5-phosphoribosyl)-5-[(5-phosphoribosylamino) methylideneamino] imidazole-4-carboxamide isomerase
L3_122_123G1_scaffold_898_14
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16069..16716)
DNA (648bp) protein (216aa)
imidazole glycerol phosphate synthase subunit hisH (EC:2.4.2.-)
Imidazole glycerol phosphate synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; EC=2.4.2.- {ECO:0000256|HAMAP-Rule:MF_00278};; IGP synthase glutamine amidotransferase subunit {ECO:0000256|HAMAP-Rule:MF_00278}; IGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; ImGP synthase subunit HisH {ECO:0000256|HAMAP-Rule:MF_00278}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
Imidazole glycerol phosphate synthase subunit HisH n=12 Tax=Bifidobacterium RepID=D6DCP4_BIFLN
L3_122_123G1_scaffold_898_15
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16751..17545)
DNA (795bp) protein (265aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=V6XZC3_BIFLN
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ESV33861.1}; TaxID=1322347 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum E18.;"
L3_122_123G1_scaffold_898_16
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(17545..18144)
DNA (600bp) protein (200aa)
Imidazoleglycerol-phosphate dehydratase {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599}; Short=IGPD {ECO:0000256|HAMAP-Rule:MF_00076};; EC=4.2.1.19 {ECO:0000256|HAMAP-Rule:MF_00076, ECO:0000256|RuleBase:RU000599};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Imidazoleglycerol-phosphate dehydratase n=13 Tax=Bifidobacterium RepID=HIS7_BIFLO
imidazoleglycerol-phosphate dehydratase
L3_122_123G1_scaffold_898_17
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18230..19390)
DNA (1161bp) protein (387aa)
Histidinol-phosphate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01023}; EC=2.6.1.9 {ECO:0000256|HAMAP-Rule:MF_01023};; Imidazole acetol-phosphate transaminase {ECO:0000256|HAMAP-Rule:MF_01023}; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Histidinol-phosphate aminotransferase n=12 Tax=Bifidobacterium RepID=E4R1U3_BIFLM
hisC; hisc
L3_122_123G1_scaffold_898_18
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19387..20769)
DNA (1383bp) protein (461aa)
Histidinol dehydrogenase {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099}; Short=HDH {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; EC=1.1.1.23 {ECO:0000256|HAMAP-Rule:MF_01024, ECO:0000256|PIRNR:PIRNR000099};; TaxID=1457186 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum EK13.;"
Histidinol dehydrogenase n=12 Tax=Bifidobacterium RepID=HISX_BIFLO
histidinol dehydrogenase
L3_122_123G1_scaffold_898_19
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(20886..21179)
DNA (294bp) protein (98aa)
Acylphosphatase {ECO:0000256|RuleBase:RU000553}; EC=3.6.1.7 {ECO:0000256|RuleBase:RU000553};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Acylphosphatase n=4 Tax=Bifidobacterium RepID=E4R1U1_BIFLM
acyP; acyp
L3_122_123G1_scaffold_898_20
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21192..21593)
DNA (402bp) protein (134aa)
Carbohydrate kinase FGGY family protein n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5NGZ8_9BIFI
carbohydrate kinase
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EIJ32735.1}; TaxID=1161743 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 44B.;"
L3_122_123G1_scaffold_898_21
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(21590..22381)
DNA (792bp) protein (264aa)
Carbohydrate kinase n=4 Tax=Bifidobacterium longum RepID=F8AP53_BIFLN
gntK1; gntk1
Carbohydrate kinase, FGGY family protein {ECO:0000313|EMBL:EIJ23103.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_122_123G1_scaffold_898_22
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

22488..23315
DNA (828bp) protein (276aa)
Diketogulonate reductase n=1 Tax=Bifidobacterium longum subsp. longum KACC 91563 RepID=F8AP52_BIFLN
akrA1; diketogulonate reductase
Diketogulonate reductase {ECO:0000313|EMBL:AEI97205.1}; TaxID=1035817 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum KACC 91563.;"
Displaying 22 items

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