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L3_122_242G1_scaffold_56

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Displaying items 1-30 of 139 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_242G1_scaffold_56_1
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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30..266
DNA (237bp) protein (79aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BXS3_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19296.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_122_242G1_scaffold_56_2
Ruminococcus gnavus CAG:126, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

389..613
DNA (225bp) protein (75aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=A7B8L7_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:CCZ66756.1}; TaxID=1263106 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus gnavus CAG:126.;"
UDP-glucose 4-epimerase
L3_122_242G1_scaffold_56_3
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

714..2060
DNA (1347bp) protein (449aa)
Uncharacterized protein n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BWY6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19295.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
MATE family multidrug resistance protein
L3_122_242G1_scaffold_56_4
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2140..2892
DNA (753bp) protein (251aa)
3-dehydroquinate dehydratase {ECO:0000256|HAMAP-Rule:MF_00214}; Short=3-dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214};; EC=4.2.1.10 {ECO:0000256|HAMAP-Rule:MF_00214};; Type I DHQase {ECO:0000256|HAMAP-Rule:MF_00214}; Type I dehydroquinase {ECO:0000256|HAMAP-Rule:MF_00214}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
3-dehydroquinate dehydratase, type I (EC:4.2.1.10)
3-dehydroquinate dehydratase n=2 Tax=Lachnospiraceae RepID=A7B8M0_RUMGN
L3_122_242G1_scaffold_56_5
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2907..3947
DNA (1041bp) protein (347aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=V8BVU2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46903.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
LacI family transcriptional regulator
L3_122_242G1_scaffold_56_6
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4157..6022
DNA (1866bp) protein (622aa)
PTS system beta-glucoside-specific transporter subunit IIBCA (EC:2.7.1.69)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JYA3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46902.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_122_242G1_scaffold_56_7
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6041..7345
DNA (1305bp) protein (435aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JYG0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46901.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein DUF4038
L3_122_242G1_scaffold_56_8
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7349..8782
DNA (1434bp) protein (478aa)
bglH2; aryl-phospho-beta-d-glucosidase (EC:3.2.1.21)
6-phospho-beta-glucosidase n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JYA2_9FIRM
6-phospho-beta-glucosidase {ECO:0000313|EMBL:EGN46900.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_122_242G1_scaffold_56_9
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9408..10118
DNA (711bp) protein (237aa)
GDSL-like protein n=2 Tax=Ruminococcus gnavus RepID=A7B564_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19284.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
G-D-S-L family lipolytic protein
L3_122_242G1_scaffold_56_10
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10134..10583
DNA (450bp) protein (150aa)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=A7B563_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77086.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
hypothetical protein
L3_122_242G1_scaffold_56_11
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10720..11574
DNA (855bp) protein (285aa)
Transcriptional regulator, AraC family n=2 Tax=Ruminococcus gnavus RepID=A7B562_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19282.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
AraC family transcriptional regulator
L3_122_242G1_scaffold_56_12
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11726..13063
DNA (1338bp) protein (446aa)
ABC transporter, solute-binding protein n=2 Tax=Ruminococcus gnavus RepID=A7B561_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19281.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
extracellular solute-binding protein
L3_122_242G1_scaffold_56_13
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13109..13999
DNA (891bp) protein (297aa)
ABC transporter, permease protein n=2 Tax=Ruminococcus gnavus RepID=A7B560_RUMGN
ABC transporter, permease protein {ECO:0000313|EMBL:EDN77083.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
sugar ABC transporter permease
L3_122_242G1_scaffold_56_14
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13999..14832
DNA (834bp) protein (278aa)
ABC transporter, permease protein n=1 Tax=Ruminococcus gnavus ATCC 29149 RepID=A7B559_RUMGN
ABC transporter, permease protein {ECO:0000313|EMBL:EDN77082.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
glycerol-3-phosphate transporter membrane protein
L3_122_242G1_scaffold_56_15
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14854..15978
DNA (1125bp) protein (375aa)
Oxidoreductase, NAD-binding domain protein n=2 Tax=Ruminococcus gnavus RepID=A7B558_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19278.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
putative oxidoreductase
L3_122_242G1_scaffold_56_16
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15975..18146
DNA (2172bp) protein (724aa)
sialidase B (EC:3.2.1.18)
BNR/Asp-box repeat protein n=2 Tax=Ruminococcus gnavus RepID=A7B557_RUMGN
Anhydrosialidase {ECO:0000313|EMBL:ETD19277.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_122_242G1_scaffold_56_17
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18191..18946
DNA (756bp) protein (252aa)
Putative N-acetylmannosamine-6-phosphate 2-epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; EC=5.1.3.9 {ECO:0000256|HAMAP-Rule:MF_01235};; ManNAc-6-P epimerase {ECO:0000256|HAMAP-Rule:MF_01235}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
Putative N-acetylmannosamine-6-phosphate epimerase (EC:5.1.3.9)
Uncharacterized protein n=2 Tax=Ruminococcus gnavus RepID=V8BXQ6_RUMGN
L3_122_242G1_scaffold_56_18
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18994..19911
DNA (918bp) protein (306aa)
Dihydrodipicolinate synthase/N-acetylneuraminate lyase (EC:4.1.3.3)
N-acetylneuraminate lyase n=1 Tax=Ruminococcus gnavus CC55_001C RepID=V8BWW5_RUMGN
N-acetylneuraminate lyase {ECO:0000313|EMBL:ETD19275.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_122_242G1_scaffold_56_19
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20061..20957
DNA (897bp) protein (299aa)
Transcriptional regulator/sugar kinase (EC:2.7.1.60)
ROK family protein n=2 Tax=Ruminococcus gnavus RepID=A7B554_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19274.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
L3_122_242G1_scaffold_56_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21084..21488)
DNA (405bp) protein (135aa)
HTH-type transcriptional regulator AdhR n=2 Tax=Ruminococcus gnavus RepID=A7B553_RUMGN
HTH-type transcriptional regulator AdhR {ECO:0000313|EMBL:EDN77076.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
MerR family transcriptional regulator
L3_122_242G1_scaffold_56_21
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21688..22071
DNA (384bp) protein (128aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B551_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN46899.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
hypothetical protein
L3_122_242G1_scaffold_56_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22077..22688
DNA (612bp) protein (204aa)
HD domain protein n=3 Tax=Lachnospiraceae RepID=A7B550_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD19271.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
hypothetical protein
L3_122_242G1_scaffold_56_23
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22726..23454
DNA (729bp) protein (243aa)
NAD-dependent protein deacetylases, SIR2 family (EC:3.5.1.-)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 2_1_58FAA RepID=F7JY99_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGN46897.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
L3_122_242G1_scaffold_56_24
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23522..24385)
DNA (864bp) protein (288aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=A7B548_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EDN77071.1}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
Predicted SAM-dependent methyltransferases
L3_122_242G1_scaffold_56_25
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25349..25666
DNA (318bp) protein (106aa)
30S ribosomal protein S10 n=7 Tax=Lachnospiraceae RepID=A7B546_RUMGN
30S ribosomal protein S10 {ECO:0000256|HAMAP-Rule:MF_00508}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
SSU ribosomal protein S10P
L3_122_242G1_scaffold_56_26
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


25768..26451
DNA (684bp) protein (228aa)
50S ribosomal protein L3 n=3 Tax=Clostridiales RepID=A7B545_RUMGN
50S ribosomal protein L3 {ECO:0000256|HAMAP-Rule:MF_01325, ECO:0000256|RuleBase:RU003906}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
LSU ribosomal protein L3P
L3_122_242G1_scaffold_56_27
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


26481..27101
DNA (621bp) protein (207aa)
50S ribosomal protein L4 n=3 Tax=Lachnospiraceae RepID=A7B544_RUMGN
50S ribosomal protein L4 {ECO:0000256|HAMAP-Rule:MF_01328}; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
LSU ribosomal protein L4P
L3_122_242G1_scaffold_56_28
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27101..27400
DNA (300bp) protein (100aa)
50S ribosomal protein L23 n=4 Tax=Clostridiales RepID=A7B543_RUMGN
50S ribosomal protein L23 {ECO:0000256|HAMAP-Rule:MF_01369}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
Ribosomal protein L23
L3_122_242G1_scaffold_56_29
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


27467..28309
DNA (843bp) protein (281aa)
50S ribosomal protein L2 n=4 Tax=Clostridiales RepID=A7B542_RUMGN
50S ribosomal protein L2 {ECO:0000256|HAMAP-Rule:MF_01320}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
LSU ribosomal protein L2P
L3_122_242G1_scaffold_56_30
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


28336..28617
DNA (282bp) protein (94aa)
30S ribosomal protein S19 n=4 Tax=Clostridiales RepID=A7B541_RUMGN
30S ribosomal protein S19 {ECO:0000256|HAMAP-Rule:MF_00531}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
SSU ribosomal protein S19P
Displaying items 1-30 of 139 in total

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