ggKbase home page

L3_122_242G1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 141 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_242G1_scaffold_87_1
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

199..429
DNA (231bp) protein (77aa)
Uncharacterized protein n=6 Tax=Bacteroidales RepID=C7X5A7_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK64137.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
L3_122_242G1_scaffold_87_2
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

617..1669
DNA (1053bp) protein (351aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=A6LHH8_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU53075.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_242G1_scaffold_87_3
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

1765..2625
DNA (861bp) protein (287aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
Signal peptidase I n=5 Tax=Bacteroidales RepID=A6LHH7_PARD8
signal peptidase I
L3_122_242G1_scaffold_87_4
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

2632..4041
DNA (1410bp) protein (470aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM23_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10400.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_242G1_scaffold_87_5
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

4044..5852
DNA (1809bp) protein (603aa)
Membrane protein n=2 Tax=Bacteroidales RepID=D7IM22_9BACE
Membrane protein {ECO:0000313|EMBL:EFI10399.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_242G1_scaffold_87_6
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

5953..7020
DNA (1068bp) protein (356aa)
ABC transport system n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM21_9BACE
ABC transport system {ECO:0000313|EMBL:EFI10398.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
cation efflux system protein
L3_122_242G1_scaffold_87_7
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

7048..10113
DNA (3066bp) protein (1022aa)
ABC transport system n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM20_9BACE
ABC transport system {ECO:0000313|EMBL:EFI10397.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
cation efflux system protein
L3_122_242G1_scaffold_87_8
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10110..11603
DNA (1494bp) protein (498aa)
Outer membrane efflux protein n=2 Tax=Bacteroidales RepID=C7X599_9PORP
Outer membrane efflux protein {ECO:0000313|EMBL:EEU53069.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
outer membrane protein TolC
L3_122_242G1_scaffold_87_9
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11737..14823
DNA (3087bp) protein (1029aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C7X598_9PORP
Drug efflux protein {ECO:0000313|EMBL:CDB50763.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
drug efflux protein
L3_122_242G1_scaffold_87_10
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

14876..16222
DNA (1347bp) protein (449aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM17_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10394.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_242G1_scaffold_87_11
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

16267..16623
DNA (357bp) protein (119aa)
Putative uncharacterized protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM16_9BACE
Putative uncharacterized protein {ECO:0000313|EMBL:EFI10393.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_242G1_scaffold_87_12
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16773..18062)
DNA (1290bp) protein (430aa)
Uncharacterized protein (Fragment) n=1 Tax=Parabacteroides sp. D13 RepID=C7X595_9PORP
Uncharacterized protein {ECO:0000313|EMBL:KEJ85032.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
hypothetical protein
L3_122_242G1_scaffold_87_13
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18100..18492)
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 2_1_33B RepID=D0TDW8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:KEJ85031.1}; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Predicted AAA-ATPase.
L3_122_242G1_scaffold_87_14
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18852..19268
DNA (417bp) protein (139aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LHG5_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU53064.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_242G1_scaffold_87_15
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

19265..21556
DNA (2292bp) protein (764aa)
Peptidase families S8 and S53 subfamily n=3 Tax=Bacteroidales RepID=D7IM14_9BACE
calcium dependent protease
Putative calcium dependent protease {ECO:0000313|EMBL:ABR45128.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_242G1_scaffold_87_16
Porphyromonas sp. 31_2, Porphyromonas, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21905..25123
DNA (3219bp) protein (1073aa)
Carbamoyl-phosphate synthase (glutamine-hydrolyzing) {ECO:0000256|SAAS:SAAS00086116}; EC=6.3.5.5 {ECO:0000256|SAAS:SAAS00086116};; TaxID=658663 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Porphyromonas.;" source="Porphyromonas sp. 31_2.;"
Glutamine-dependent carbamyl phosphate synthetase n=5 Tax=Bacteroidales RepID=A6LHG3_PARD8
glutamine-dependent carbamyl phosphate synthetase
L3_122_242G1_scaffold_87_17
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25174..27261
DNA (2088bp) protein (696aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=A6LHG2_PARD8
Uncharacterized protein {ECO:0000313|EMBL:EKN31858.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
hypothetical protein
L3_122_242G1_scaffold_87_18
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27516..27755
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Bacteroidales RepID=C7X590_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EEU53060.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_242G1_scaffold_87_19
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

27761..28894
DNA (1134bp) protein (378aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=C7X589_9PORP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EEU53059.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
L3_122_242G1_scaffold_87_20
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28884..29477
DNA (594bp) protein (198aa)
Uncharacterized protein n=5 Tax=Bacteroidales RepID=A6LHG0_PARD8
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABR45124.1}; TaxID=435591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis (strain ATCC 8503 / DSM 20701 / NCTC; 11152).;"
L3_122_242G1_scaffold_87_21
unknown

Not on your lists

comp(29708..29815)
DNA (108bp) protein (36aa)

This feature has no annotations

L3_122_242G1_scaffold_87_22
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29875..31251
DNA (1377bp) protein (459aa)
Oxidoreductase, FAD-dependent n=5 Tax=Bacteroidales RepID=D7IM08_9BACE
Oxidoreductase, FAD-dependent {ECO:0000313|EMBL:EFI10385.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
hypothetical protein
L3_122_242G1_scaffold_87_23
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(31352..34123)
DNA (2772bp) protein (924aa)
Oxidoreductase, FAD/iron-sulfur cluster-binding domain protein n=1 Tax=Bacteroides sp. 3_1_19 RepID=D7IM07_9BACE
Oxidoreductase, FAD/iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:EFI10384.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
oxidoreductase
L3_122_242G1_scaffold_87_24
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(34187..35305)
DNA (1119bp) protein (373aa)
Uncharacterized protein n=4 Tax=Bacteroidales RepID=C7X585_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN22280.1}; TaxID=999417 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL09T03C24.;"
iron(III) ABC transporter periplasmic iron-binding protein
L3_122_242G1_scaffold_87_25
Parabacteroides sp. 20_3, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35305..36669)
DNA (1365bp) protein (455aa)
Uncharacterized protein n=7 Tax=Bacteroidales RepID=C7X584_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EFK64119.1}; TaxID=469591 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. 20_3.;"
hypothetical protein
L3_122_242G1_scaffold_87_26
Parabacteroides sp. D13, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36690..38693)
DNA (2004bp) protein (668aa)
TonB-dependent receptor n=2 Tax=Bacteroidales RepID=C7X583_9PORP
TonB-dependent receptor {ECO:0000313|EMBL:EEU53053.1}; TaxID=563193 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D13.;"
vitamin B12 receptor
L3_122_242G1_scaffold_87_27
Parabacteroides sp. CAG:2, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(39046..40728)
DNA (1683bp) protein (561aa)
TrkA C-terminal domain protein n=7 Tax=Bacteroidales RepID=C7X582_9PORP
Putative potassium uptake protein TrkA {ECO:0000313|EMBL:CDB50774.1}; TaxID=1262912 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides; environmental samples.;" source="Parabacteroides sp. CAG:2.;"
hypothetical protein
L3_122_242G1_scaffold_87_28
Parabacteroides sp. D25, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41090..41251)
DNA (162bp) protein (54aa)
Uncharacterized protein n=3 Tax=Parabacteroides RepID=K6AA14_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN31848.1}; TaxID=658661 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides sp. D25.;"
L3_122_242G1_scaffold_87_29
Bacteroides sp. 3_1_19, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(41387..42919)
DNA (1533bp) protein (511aa)
propionyl-CoA carboxylase (EC:6.4.1.3)
Carboxyl transferase domain protein n=3 Tax=Bacteroidales RepID=C7X581_9PORP
Propionyl-CoA carboxylase, beta subunit {ECO:0000313|EMBL:EFI10379.1}; TaxID=469592 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 3_1_19.;"
L3_122_242G1_scaffold_87_30
Parabacteroides distasonis, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(42912..43436)
DNA (525bp) protein (175aa)
Biotin-requiring enzyme n=6 Tax=Bacteroidales RepID=C7X580_9PORP
Uncharacterized protein {ECO:0000313|EMBL:EKN20428.1}; TaxID=999416 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides distasonis CL03T12C09.;"
acetyl-COA carboxylase
Displaying items 1-30 of 141 in total

View Taxonomy