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L3_122_242G1_scaffold_54

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Displaying items 1-30 of 113 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_122_242G1_scaffold_54_1
unknown

Not on your lists

comp(2..61)
DNA (60bp) protein (20aa)

This feature has no annotations

L3_122_242G1_scaffold_54_2
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(203..580)
DNA (378bp) protein (126aa)
Iron dependent repressor DNA binding domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP5_9ACTN
Iron dependent repressor DNA binding domain protein {ECO:0000313|EMBL:EBA39212.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_122_242G1_scaffold_54_3
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(793..1563)
DNA (771bp) protein (257aa)
Cof-like hydrolase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP4_9ACTN
Cof-like hydrolase {ECO:0000313|EMBL:EBA39211.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
cof family hydrolase
L3_122_242G1_scaffold_54_4
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1570..3429)
DNA (1860bp) protein (620aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75128.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
ABC transporter
L3_122_242G1_scaffold_54_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(3633..4505)
DNA (873bp) protein (291aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Phosphate ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP2_9ACTN
pstBB; phosphate ABC transporter ATPase
L3_122_242G1_scaffold_54_6
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4502..5428)
DNA (927bp) protein (309aa)
Phosphate ABC transporter permease protein PstA n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHS7_9ACTN
Phosphate ABC transporter, permease PstA {ECO:0000313|EMBL:KGI75130.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphate ABC transporter permease
L3_122_242G1_scaffold_54_7
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(5421..6329)
DNA (909bp) protein (303aa)
Phosphate ABC transporter, permease protein PstC n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAP0_9ACTN
Phosphate ABC transporter, permease protein PstC {ECO:0000313|EMBL:EBA39207.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
pstC; phosphate ABC transporter
L3_122_242G1_scaffold_54_8
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6354..7295)
DNA (942bp) protein (314aa)
Phosphate binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75132.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
phosphate binding protein
L3_122_242G1_scaffold_54_9
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7809..9245)
DNA (1437bp) protein (479aa)
Dipeptidase PepV n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN6_9ACTN
Dipeptidase PepV {ECO:0000313|EMBL:EBA39203.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
dipeptidase
L3_122_242G1_scaffold_54_10
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9300..9962)
DNA (663bp) protein (221aa)
Haloacid dehalogenase-like hydrolase n=1 Tax=Collinsella sp. CAG:166 RepID=R6A4R1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75134.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
HAD-superfamily hydrolase
L3_122_242G1_scaffold_54_11
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

10119..10979
DNA (861bp) protein (287aa)
EDD domain protein, DegV family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN4_9ACTN
EDD domain protein, DegV family {ECO:0000313|EMBL:EBA39201.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
degV; DegV family protein
L3_122_242G1_scaffold_54_12
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11073..11381)
DNA (309bp) protein (103aa)
Addiction module toxin, RelE/StbE family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75136.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
relE; addiction module toxin, RelE/StbE
L3_122_242G1_scaffold_54_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11384..11683)
DNA (300bp) protein (100aa)
Addiction module antitoxin RelB/DinJ family n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZML3_9ACTN
Addiction module antitoxin RelB/DinJ family {ECO:0000313|EMBL:CDA35541.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
RelB antitoxin
L3_122_242G1_scaffold_54_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11797..12555)
DNA (759bp) protein (253aa)
TIGR00730 family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAN1_9ACTN
TIGR00730 family protein {ECO:0000313|EMBL:EBA39198.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_122_242G1_scaffold_54_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12769..13908)
DNA (1140bp) protein (380aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
tRNA-guanine transglycosylase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZGA0_9ACTN
L3_122_242G1_scaffold_54_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(14373..15221)
DNA (849bp) protein (283aa)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Collinsella RepID=A4EAM5_9ACTN
Oxidoreductase, short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:EBA39192.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_122_242G1_scaffold_54_17
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

15468..17231
DNA (1764bp) protein (588aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAM4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75059.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_122_242G1_scaffold_54_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17489..18703)
DNA (1215bp) protein (405aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBI6_9ACTN
S-adenosylmethionine/tRNA-ribosyltransferase-isomerase
L3_122_242G1_scaffold_54_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(18774..19349)
DNA (576bp) protein (192aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPD1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36241.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_122_242G1_scaffold_54_20
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19360..19926)
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A533_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75022.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_122_242G1_scaffold_54_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


20059..22209
DNA (2151bp) protein (717aa)
methionyl-tRNA synthetase (EC:6.1.1.10)
tRNA ligases class I (M) n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z976_9ACTN
tRNA ligases class I (M) {ECO:0000313|EMBL:CDA36243.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_122_242G1_scaffold_54_22
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22247..23350
DNA (1104bp) protein (368aa)
NOL1/NOP2/sun family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZI22_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75024.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Fmu (Sun) domain-containing protein
L3_122_242G1_scaffold_54_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23375..23545)
DNA (171bp) protein (57aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBI9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75025.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
L3_122_242G1_scaffold_54_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

23736..24827
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPD6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36246.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
dioxygenase-like 2-nitropropane dioxygenase
L3_122_242G1_scaffold_54_25
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(24908..25798)
DNA (891bp) protein (297aa)
EDD domain protein DegV family n=1 Tax=Collinsella sp. CAG:166 RepID=R6A538_9ACTN
EDD domain protein DegV family {ECO:0000313|EMBL:CDA36247.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
degV family protein
L3_122_242G1_scaffold_54_26
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26119..28035
DNA (1917bp) protein (639aa)
Fructose-bisphosphatase {ECO:0000256|SAAS:SAAS00065010}; EC=3.1.3.11 {ECO:0000256|SAAS:SAAS00065010};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
fructose-bisphosphatase (EC:3.1.3.11)
Firmicute fructose-1,6-bisphosphatase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAL0_9ACTN
L3_122_242G1_scaffold_54_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28114..28509
DNA (396bp) protein (132aa)
GtrA-like protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4EAK9_9ACTN
GtrA-like protein {ECO:0000313|EMBL:EBA39532.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_122_242G1_scaffold_54_28
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

28728..29135
DNA (408bp) protein (136aa)
Uncharacterized protein n=2 Tax=Collinsella RepID=R5ZBJ3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36250.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_122_242G1_scaffold_54_29
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29295..30188)
DNA (894bp) protein (298aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZPE1_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:CDA36251.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_122_242G1_scaffold_54_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30198..33611)
DNA (3414bp) protein (1138aa)
Repeat protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A543_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75033.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
FOG: WD40-like repeat protein
Displaying items 1-30 of 113 in total

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