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L3_123_000G1_scaffold_33

Search features with annotation key words

Displaying items 1-30 of 224 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_33_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..136
DNA (135bp) protein (45aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QS69_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53488.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
GGGtGRT family protein
L3_123_000G1_scaffold_33_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

660..815
DNA (156bp) protein (52aa)
Conserved domain protein n=4 Tax=Clostridium butyricum RepID=B1QXR4_CLOBU
Conserved domain protein {ECO:0000313|EMBL:EEP54735.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
putative zinc-binding domain-containing protein
L3_123_000G1_scaffold_33_3
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1604..3577
DNA (1974bp) protein (658aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0R7_CLOBU
Methyl-accepting chemotaxis protein {ECO:0000313|EMBL:KJZ85321.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
methyl-accepting chemotaxis sensory transducer
L3_123_000G1_scaffold_33_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3676..4344)
DNA (669bp) protein (223aa)
UPI0003D65E1A related cluster n=1 Tax=unknown RepID=UPI0003D65E1A
Uncharacterized protein {ECO:0000313|EMBL:KJZ85355.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_123_000G1_scaffold_33_5
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4548..5603
DNA (1056bp) protein (352aa)
D-galactose-binding periplasmic protein n=2 Tax=Clostridium butyricum RepID=B1QXR7_CLOBU
Galactose/methyl galactoside ABC transport system, D-galactose-binding periplasmic protein MglB {ECO:0000313|EMBL:KJZ85340.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
mglB1; D-galactose-binding periplasmic protein MglB
L3_123_000G1_scaffold_33_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5764..6786
DNA (1023bp) protein (341aa)
Lysozyme {ECO:0000256|RuleBase:RU361176}; EC=3.2.1.17 {ECO:0000256|RuleBase:RU361176};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
lyc; autolytic lysozyme Lyc (EC:3.2.1.17)
Cell wall binding repeat domain protein n=2 Tax=Clostridium butyricum RepID=B1QXR9_CLOBU
L3_123_000G1_scaffold_33_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7063..10392
DNA (3330bp) protein (1110aa)
UPI0003D61095 related cluster n=1 Tax=unknown RepID=UPI0003D61095
Tetratricopeptide repeat protein {ECO:0000313|EMBL:ETI91020.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
hypothetical protein
L3_123_000G1_scaffold_33_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10602..10934
DNA (333bp) protein (111aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXS1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:EEP53104.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hypothetical protein
L3_123_000G1_scaffold_33_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11441..12661
DNA (1221bp) protein (407aa)
Lysine-N-methylase {ECO:0000313|EMBL:KJZ85325.1}; EC=2.1.1.- {ECO:0000313|EMBL:KJZ85325.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
fliB; flagellin lysine-N-methylase FliB (EC:2.1.1.-)
FliB family protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JKX4_CLOBU
L3_123_000G1_scaffold_33_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12752..13315
DNA (564bp) protein (188aa)
Accessory gene regulator B superfamily n=2 Tax=Clostridium butyricum RepID=B1QXS4_CLOBU
Putative accessory gene regulator protein B {ECO:0000313|EMBL:EEP54917.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
accessory gene regulator B
L3_123_000G1_scaffold_33_11
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13435..14103
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=M8JBU4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ85339.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_123_000G1_scaffold_33_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14169..16001)
DNA (1833bp) protein (611aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
1,4-alpha-glucan branching enzyme n=1 Tax=Clostridium butyricum 60E.3 RepID=N9Z0R0_CLOBU
Carbohydrate-Binding Module Family 48 protein / Glycoside Hydrolase Family 13 protein
L3_123_000G1_scaffold_33_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16621..16860
DNA (240bp) protein (80aa)
Uncharacterized protein n=3 Tax=Clostridium butyricum RepID=B1QXS7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33259.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_123_000G1_scaffold_33_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17060..17929
DNA (870bp) protein (290aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA38_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ33258.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
radical SAM domain protein
L3_123_000G1_scaffold_33_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18018..18608
DNA (591bp) protein (197aa)
Rubrerythrin n=3 Tax=Clostridium butyricum RepID=B1QXS9_CLOBU
Rubrerythrin {ECO:0000313|EMBL:KJZ83694.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
rbr; rubrerythrin
L3_123_000G1_scaffold_33_16
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18715..19293
DNA (579bp) protein (193aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXT0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83692.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_123_000G1_scaffold_33_17
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19487..20089
DNA (603bp) protein (201aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
UPI0003D5DC84 related cluster n=1 Tax=unknown RepID=UPI0003D5DC84
ruvA; Holliday junction DNA helicase RuvA
L3_123_000G1_scaffold_33_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20237..21280
DNA (1044bp) protein (348aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Holliday junction ATP-dependent DNA helicase RuvB n=4 Tax=Clostridium butyricum RepID=B1QXT2_CLOBU
ruvB; Holliday junction DNA helicase RuvB
L3_123_000G1_scaffold_33_19
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21336..22463
DNA (1128bp) protein (376aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Clostridium butyricum RepID=M8JKY6_CLOBU
queA; S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L3_123_000G1_scaffold_33_20
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22657..23793
DNA (1137bp) protein (379aa)
Queuine tRNA-ribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777}; EC=2.4.2.29 {ECO:0000256|HAMAP-Rule:MF_00168, ECO:0000256|RuleBase:RU003777};; Guanine insertion enzyme {ECO:0000256|HAMAP-Rule:MF_00168}; tRNA-guanine transglycosylase {ECO:0000256|HAMAP-Rule:MF_00168}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
tgt; queuine tRNA-ribosyltransferase (EC:2.4.2.29)
Queuine tRNA-ribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QXT4_CLOBU
L3_123_000G1_scaffold_33_21
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24062..24346
DNA (285bp) protein (95aa)
Preprotein translocase, YajC subunit n=3 Tax=Clostridium butyricum RepID=B1QXT5_CLOBU
Preprotein translocase subunit YajC {ECO:0000313|EMBL:KJZ83700.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
preprotein translocase, YajC subunit
L3_123_000G1_scaffold_33_22
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24505..24879
DNA (375bp) protein (125aa)
UPI000399FD18 related cluster n=1 Tax=unknown RepID=UPI000399FD18
Membrane protein {ECO:0000313|EMBL:ETI91035.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
membrane protein
L3_123_000G1_scaffold_33_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25265..26524
DNA (1260bp) protein (420aa)
Protein translocase subunit SecD n=3 Tax=Clostridium butyricum RepID=C4IKT8_CLOBU
Protein translocase subunit SecD {ECO:0000256|HAMAP-Rule:MF_01463}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
secD; protein translocase subunit SecD
L3_123_000G1_scaffold_33_24
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26517..27386
DNA (870bp) protein (290aa)
Protein-export membrane protein SecF n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AA31_CLOBU
Protein-export membrane protein SecF {ECO:0000256|HAMAP-Rule:MF_01464}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
secF; protein translocase subunit SecF
L3_123_000G1_scaffold_33_25
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27517..28395
DNA (879bp) protein (293aa)
recJ1; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AMD3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ83653.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_123_000G1_scaffold_33_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28522..29040
DNA (519bp) protein (173aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
apt; adenine phosphoribosyltransferase Apt (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=4 Tax=Clostridium butyricum RepID=B1QTX4_CLOBU
L3_123_000G1_scaffold_33_27
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29225..31438
DNA (2214bp) protein (738aa)
GTP pyrophosphokinase {ECO:0000313|EMBL:KJZ83633.1}; EC=2.7.6.5 {ECO:0000313|EMBL:KJZ83633.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
relA; GTP pyrophosphokinase RelA (EC:2.7.6.5)
RelA/SpoT family protein n=3 Tax=Clostridium butyricum RepID=C4IKU2_CLOBU
L3_123_000G1_scaffold_33_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31504..31953
DNA (450bp) protein (150aa)
D-aminoacyl-tRNA deacylase {ECO:0000256|HAMAP-Rule:MF_00518}; EC=3.1.1.96 {ECO:0000256|HAMAP-Rule:MF_00518};; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dtd; D-tyrosyl-tRNA(Tyr) deacylase Dtd (EC:3.1.-.-)
D-tyrosyl-tRNA(Tyr) deacylase n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AKG6_CLOBU
L3_123_000G1_scaffold_33_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32056..32655
DNA (600bp) protein (200aa)
Metallo-beta-lactamase family protein n=4 Tax=Clostridium butyricum RepID=B1R2Q4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ93042.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
metallo-beta-lactamase family protein
L3_123_000G1_scaffold_33_30
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32817..34244
DNA (1428bp) protein (476aa)
Coproporphyrinogen dehydrogenase {ECO:0000313|EMBL:EEP54134.1}; EC=1.3.99.22 {ECO:0000313|EMBL:EEP54134.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
hemZ; oxygen-independent coproporphyrinogen-III oxidase 2 (EC:1.3.99.22)
Oxygen-independent coproporphyrinogen III oxidase 2 n=3 Tax=Clostridium butyricum RepID=B1R2Q5_CLOBU
Displaying items 1-30 of 224 in total

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