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L3_123_000G1_scaffold_61

Search features with annotation key words

Displaying items 1-30 of 173 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_61_1
Klebsiella pneumoniae, Klebsiella, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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2..280
DNA (279bp) protein (93aa)
Prepilin-type N-terminal cleavage/methylation domain-containing protein n=1 Tax=Escherichia coli KTE233 RepID=L3HSF2_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EWD80573.1}; TaxID=1400171 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Klebsiella.;" source="Klebsiella pneumoniae UCI 18.;"
type IV pilin protein
L3_123_000G1_scaffold_61_2
Pseudomonas amygdali, Pseudomonas, Pseudomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

407..1420
DNA (1014bp) protein (338aa)
Type II secretion system protein E n=1 Tax=Pseudomonas syringae pv. lachrymans str. M301315 RepID=F3E7C9_PSESL
Type II secretion system protein E {ECO:0000313|EMBL:EGH82062.1}; TaxID=629260 species="Bacteria; Proteobacteria; Gammaproteobacteria; Pseudomonadales; Pseudomonadaceae; Pseudomonas; Pseudomonas amygdali.;" source="Pseudomonas amygdali pv. lachrymans str. M301315.;"
type II secretion system protein E
L3_123_000G1_scaffold_61_3
Methylomicrobium alcaliphilum, Methylomicrobium, Methylococcales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(1456..2796)
DNA (1341bp) protein (447aa)
hypothetical protein n=1 Tax=Methylomicrobium buryatense RepID=UPI000344D9BE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCE23096.1}; TaxID=1091494 species="Bacteria; Proteobacteria; Gammaproteobacteria; Methylococcales; Methylococcaceae; Methylomicrobium.;" source="Methylomicrobium alcaliphilum (strain DSM 19304 / NCIMB 14124 / VKM; B-2133 / 20Z).;"
L3_123_000G1_scaffold_61_4
unknown

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2966..3556
DNA (591bp) protein (197aa)

This feature has no annotations

L3_123_000G1_scaffold_61_5
unknown

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3628..3858
DNA (231bp) protein (77aa)

This feature has no annotations

L3_123_000G1_scaffold_61_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

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3941..4465
DNA (525bp) protein (175aa)
Uncharacterized protein n=1 Tax=Salmonella enterica subsp. enterica serovar Derby str. 626 RepID=V2BUK6_SALDE
Uncharacterized protein {ECO:0000313|EMBL:CAJ87570.1}; TaxID=562 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli.;"
hypothetical protein
L3_123_000G1_scaffold_61_7
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4478..5722
DNA (1245bp) protein (415aa)
Uncharacterized protein n=5 Tax=Escherichia coli RepID=N2NL63_ECOLX
Uncharacterized protein {ECO:0000313|EMBL:EOU89670.1}; TaxID=1169353 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli KTE36.;"
hypothetical protein
L3_123_000G1_scaffold_61_8
Burkholderia vietnamiensis, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5809..6348
DNA (540bp) protein (180aa)
Uncharacterized protein n=1 Tax=Burkholderia vietnamiensis (strain G4 / LMG 22486) RepID=A4JHB3_BURVG
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ABO55666.1}; TaxID=269482 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia vietnamiensis (strain G4 / LMG 22486) (Burkholderia; cepacia (strain R1808)).;"
L3_123_000G1_scaffold_61_9
unknown

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6360..6803
DNA (444bp) protein (148aa)

This feature has no annotations

L3_123_000G1_scaffold_61_10
unknown

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comp(6825..7511)
DNA (687bp) protein (229aa)

This feature has no annotations

L3_123_000G1_scaffold_61_11
unknown

Not on your lists

comp(7587..7907)
DNA (321bp) protein (107aa)

This feature has no annotations

L3_123_000G1_scaffold_61_12
unknown

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comp(7982..8728)
DNA (747bp) protein (249aa)

This feature has no annotations

L3_123_000G1_scaffold_61_13
unknown

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8882..9427
DNA (546bp) protein (182aa)

This feature has no annotations

L3_123_000G1_scaffold_61_14
unknown

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9551..10561
DNA (1011bp) protein (337aa)

This feature has no annotations

L3_123_000G1_scaffold_61_15
Vibrio parahaemolyticus, Vibrio, Vibrionales, Gammaproteobacteria, Proteobacteria, Bacteria

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10640..12028
DNA (1389bp) protein (463aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|SAAS:SAAS00195506};; TaxID=1238224 species="Bacteria; Proteobacteria; Gammaproteobacteria; Vibrionales; Vibrionaceae; Vibrio.;" source="Vibrio parahaemolyticus VPCR-2010.;"
Exonuclease VII, large subunit n=1 Tax=Vibrio parahaemolyticus VPCR-2010 RepID=T5J0Y2_VIBPH
putative exodeoxyribonuclease VII large subunit (exonuclease VII large subunit)
L3_123_000G1_scaffold_61_16
unknown

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12025..12228
DNA (204bp) protein (68aa)

This feature has no annotations

L3_123_000G1_scaffold_61_17
R_Gammaproteobacteria_41_20, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

12290..13339
DNA (1050bp) protein (350aa)
Uncharacterized protein n=3 Tax=Legionella longbeachae RepID=D3HLA5_LEGLN
dotM; hypothetical protein
Tax=RIFCSPHIGHO2_12_FULL_Gammaproteobacteria_41_20_curated
L3_123_000G1_scaffold_61_18
unknown

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13393..14061
DNA (669bp) protein (223aa)

This feature has no annotations

L3_123_000G1_scaffold_61_19
unknown

Not on your lists

14172..14297
DNA (126bp) protein (42aa)

This feature has no annotations

L3_123_000G1_scaffold_61_20
Acidithiobacillus ferrooxidans, Acidithiobacillus, Acidithiobacillales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

16723..17133
DNA (411bp) protein (137aa)
Putative uncharacterized protein n=1 Tax=Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / NCIB 8455) RepID=B7J8M6_ACIF2
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACK77999.1}; TaxID=243159 species="Bacteria; Proteobacteria; Gammaproteobacteria; Acidithiobacillales; Acidithiobacillaceae; Acidithiobacillus.;" source="Acidithiobacillus ferrooxidans (strain ATCC 23270 / DSM 14882 / CIP; 104768 / NCIMB 8455) (Ferrobacillus ferrooxidans (strain ATCC 23270)).;"
L3_123_000G1_scaffold_61_21
Chlorocebus sabaeus, Chlorocebus, Primates, Mammalia, Chordata, Metazoa

Not on your lists

17405..18163
DNA (759bp) protein (253aa)
Ankyrin repeat protein, putative n=1 Tax=Trichomonas vaginalis RepID=A2DEN4_TRIVA
Uncharacterized protein {ECO:0000313|Ensembl:ENSCSAP00000007526}; TaxID=60711 species="Eukaryota; Metazoa; Chordata; Craniata; Vertebrata; Euteleostomi; Mammalia; Eutheria; Euarchontoglires; Primates; Haplorrhini; Catarrhini; Cercopithecidae; Cercopithecinae; Chlorocebus.;" source="Chlorocebus sabaeus (Green monkey) (Cercopithecus sabaeus).;"
ankyrin
L3_123_000G1_scaffold_61_22
Cupriavidus pinatubonensis, Cupriavidus, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18191..20167)
DNA (1977bp) protein (659aa)
RNA polymerase sigma factor RpoD n=1 Tax=Herbaspirillum sp. JC206 RepID=UPI000365E798
RNA polymerase sigma factor RpoD
RNA polymerase sigma factor RpoD {ECO:0000256|HAMAP-Rule:MF_00963}; Sigma-70 {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=264198 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Cupriavidus.;" source="Cupriavidus pinatubonensis (strain JMP 134 / LMG 1197) (Ralstonia; eutropha (strain JMP 134)).;"
L3_123_000G1_scaffold_61_23
unknown

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20393..20935
DNA (543bp) protein (181aa)

This feature has no annotations

L3_123_000G1_scaffold_61_24
unknown

Not on your lists

20978..21508
DNA (531bp) protein (177aa)

This feature has no annotations

L3_123_000G1_scaffold_61_25
RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated, Bacteroidetes, Bacteria

Not on your lists

comp(21536..21934)
DNA (399bp) protein (133aa)
Predicted protein n=1 Tax=Naegleria gruberi RepID=D2VXT9_NAEGR
hypothetical protein
Tax=RIFCSPLOWO2_12_FULL_Bacteroidetes_37_12_curated
L3_123_000G1_scaffold_61_26
unknown

Not on your lists

22085..22528
DNA (444bp) protein (148aa)

This feature has no annotations

L3_123_000G1_scaffold_61_27
Arenimonas metalli, Arenimonas, Xanthomonadales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(22541..23467)
DNA (927bp) protein (309aa)
RNA polymerase factor sigma-32 n=1 Tax=Psychromonas hadalis RepID=UPI0003B5A387
RNA polymerase sigma factor RpoH {ECO:0000256|HAMAP-Rule:MF_00961}; RNA polymerase sigma-32 factor {ECO:0000256|HAMAP-Rule:MF_00961}; TaxID=1384056 species="Bacteria; Proteobacteria; Gammaproteobacteria; Xanthomonadales; Xanthomonadaceae; Arenimonas.;" source="Arenimonas metalli CF5-1.;"
RNA polymerase sigma 70
L3_123_000G1_scaffold_61_28
Candidatus Zinderia insecticola, Candidatus Zinderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23536..24393)
DNA (858bp) protein (286aa)
Chaperone protein DnaJ n=1 Tax=Zinderia insecticola (strain CARI) RepID=E0TIY7_ZINIC
dnaJ; putative chaperone protein DnaJ
Chaperone protein DnaJ {ECO:0000256|HAMAP-Rule:MF_01152, ECO:0000256|SAAS:SAAS00053159}; TaxID=871271 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Oxalobacteraceae; Candidatus Zinderia.;" source="Zinderia insecticola (strain CARI).;"
L3_123_000G1_scaffold_61_29
Eikenella corrodens, Eikenella, Neisseriales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(24443..25504)
DNA (1062bp) protein (354aa)
Uncharacterized protein n=1 Tax=Eikenella corrodens CC92I RepID=V7IEQ2_EIKCO
Uncharacterized protein {ECO:0000313|EMBL:ETA83347.1}; TaxID=1073362 species="Bacteria; Proteobacteria; Betaproteobacteria; Neisseriales; Neisseriaceae; Eikenella.;" source="Eikenella corrodens CC92I.;"
Thiol:disulfide interchange protein DsbC
L3_123_000G1_scaffold_61_30
Clostridium sp. CAG:780, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25576..26070)
DNA (495bp) protein (165aa)
Dihydrofolate reductase {ECO:0000256|PIRNR:PIRNR000194}; EC=1.5.1.3 {ECO:0000256|PIRNR:PIRNR000194};; TaxID=1262839 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:780.;"
dfrA; dihydrofolate reductase DfrA (EC:1.5.1.3)
Dihydrofolate reductase n=1 Tax=Clostridium sp. CAG:780 RepID=R5QCU1_9CLOT
Displaying items 1-30 of 173 in total

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