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L3_123_000G1_scaffold_155

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Displaying items 1-30 of 174 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_155_1
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

243..5519
DNA (5277bp) protein (1759aa)
Diguanylate cyclase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JHH4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ97596.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
diguanylate cyclase
L3_123_000G1_scaffold_155_2
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5621..6166
DNA (546bp) protein (182aa)
Cna protein B-type domain n=4 Tax=Clostridium butyricum RepID=B1QXF2_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87511.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Cna B domain protein
L3_123_000G1_scaffold_155_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6374..6811
DNA (438bp) protein (146aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase Dut (EC:3.6.1.23)
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Clostridium butyricum RepID=M8K2S0_CLOBU
L3_123_000G1_scaffold_155_4
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6937..8862)
DNA (1926bp) protein (642aa)
ABC transporter, ATP-binding protein n=3 Tax=Clostridium butyricum RepID=B1QXF0_CLOBU
ATPase components of ABC transporter {ECO:0000313|EMBL:KJZ87532.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
ydiF4; ABC transporter ATP-binding protein YdiF
L3_123_000G1_scaffold_155_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9266..9856
DNA (591bp) protein (197aa)
Transcriptional regulator, TetR family n=2 Tax=Clostridium butyricum DKU-01 RepID=M8J756_CLOBU
TetR family transcriptional regulator {ECO:0000313|EMBL:KHD15886.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
transcriptional regulator
L3_123_000G1_scaffold_155_6
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9937..10572)
DNA (636bp) protein (212aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YU55_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87596.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_123_000G1_scaffold_155_7
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10581..11048)
DNA (468bp) protein (156aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ADV6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87599.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_123_000G1_scaffold_155_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11190..12500
DNA (1311bp) protein (437aa)
csd1; cysteine desulfurase Csd (EC:2.8.1.7)
Aminotransferase n=4 Tax=Clostridium butyricum RepID=B1QXE6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30988.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_123_000G1_scaffold_155_9
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12573..13787)
DNA (1215bp) protein (405aa)
Pyrophosphate--fructose 6-phosphate 1-phosphotransferase {ECO:0000256|HAMAP-Rule:MF_01978}; EC=2.7.1.90 {ECO:0000256|HAMAP-Rule:MF_01978};; 6-phosphofructokinase, pyrophosphate dependent {ECO:0000256|HAMAP-Rule:MF_01978}; PPi-dependent phosphofructokinase {ECO:0000256|HAMAP-Rule:MF_01978}; Pyrophosphate-dependent 6-phosphofructose-1-kinase {ECO:0000256|HAMAP-Rule:MF_01978}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
pfp; pyrophosphate--fructose 6-phosphate 1-phosphotransferase Pfp (EC:2.7.1.90)
Phosphofructokinase domain protein n=3 Tax=Clostridium butyricum RepID=B1QXE5_CLOBU
L3_123_000G1_scaffold_155_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14169..14720
DNA (552bp) protein (184aa)
Membrane protein n=2 Tax=Clostridium butyricum RepID=M8J751_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30986.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
membrane protein
L3_123_000G1_scaffold_155_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14781..15203
DNA (423bp) protein (141aa)
Transcriptional regulator, Fur family n=4 Tax=Clostridium butyricum RepID=B1QXE3_CLOBU
Ferric uptake regulator, Fur family {ECO:0000313|EMBL:EEP55225.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
Fe2+/Zn2+ uptake regulation protein
L3_123_000G1_scaffold_155_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15253..16053)
DNA (801bp) protein (267aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0ADV0_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30984.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC-type Mn2+/Zn2+ transport system, permease component
L3_123_000G1_scaffold_155_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16075..16746)
DNA (672bp) protein (224aa)
Putative metal ion ABC transporter, ATP-binding protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K2R1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ30983.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
metal transport system ATP-binding protein
L3_123_000G1_scaffold_155_14
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16989..18170
DNA (1182bp) protein (394aa)
Putative D-alanine transferase n=2 Tax=Clostridium butyricum RepID=B1QXE0_CLOBU
Poly(Glycerophosphate chain) D-alanine transfer protein DltD {ECO:0000313|EMBL:KJZ87551.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dltD1; D-alanyl-lipoteichoic acid biosynthesis protein DltD
L3_123_000G1_scaffold_155_15
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18294..19811
DNA (1518bp) protein (506aa)
D-alanine--poly(phosphoribitol) ligase subunit 1 {ECO:0000256|HAMAP-Rule:MF_00593}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00593};; D-alanine-D-alanyl carrier protein ligase {ECO:0000256|HAMAP-Rule:MF_00593}; D-alanine-activating enzyme {ECO:0000256|HAMAP-Rule:MF_00593}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
dltA2; D-alanine--poly(phosphoribitol) ligase subunit 1 (EC:6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 1 n=2 Tax=Clostridium butyricum RepID=B1QXD9_CLOBU
L3_123_000G1_scaffold_155_16
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19808..20962
DNA (1155bp) protein (385aa)
UPI00039D4D67 related cluster n=1 Tax=unknown RepID=UPI00039D4D67
Uncharacterized protein {ECO:0000313|EMBL:KJZ97606.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
membrane bound O-acyl transferase, MBOAT family protein
L3_123_000G1_scaffold_155_17
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21074..21301
DNA (228bp) protein (76aa)
D-alanine--poly(phosphoribitol) ligase subunit 2 {ECO:0000256|HAMAP-Rule:MF_00565}; EC=6.1.1.13 {ECO:0000256|HAMAP-Rule:MF_00565};; D-alanyl carrier protein {ECO:0000256|HAMAP-Rule:MF_00565}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
D-alanine--poly(phosphoribitol) ligase, subunit 2 (EC:6.1.1.13)
D-alanine--poly(phosphoribitol) ligase subunit 2 n=4 Tax=Clostridium butyricum RepID=B1QXD7_CLOBU
L3_123_000G1_scaffold_155_18
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21472..21882)
DNA (411bp) protein (137aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=M8K2Q5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87594.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_123_000G1_scaffold_155_19
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22209..22610
DNA (402bp) protein (134aa)
Uncharacterized protein n=4 Tax=Clostridium butyricum RepID=B1QXD5_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87574.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_123_000G1_scaffold_155_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22765..24552
DNA (1788bp) protein (596aa)
yjbG; oligoendopeptidase F (EC:3.4.24.-)
Oligoendopeptidase F n=2 Tax=Clostridium butyricum RepID=B1QXD4_CLOBU
Oligoendopeptidase F {ECO:0000313|EMBL:KJZ87548.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
L3_123_000G1_scaffold_155_21
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24707..25771
DNA (1065bp) protein (355aa)
gluP; rhomboid protease GluP (EC:3.4.21.105)
UPI0003D61AEF related cluster n=1 Tax=unknown RepID=UPI0003D61AEF
Rhomboid family protein {ECO:0000313|EMBL:ETI89162.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
L3_123_000G1_scaffold_155_22
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25829..26464
DNA (636bp) protein (212aa)
Uncharacterized protein n=2 Tax=Clostridium butyricum RepID=R0AH88_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:KJZ87570.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
hypothetical protein
L3_123_000G1_scaffold_155_23
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26643..27989
DNA (1347bp) protein (449aa)
gluD; glutamate dehydrogenase (EC:1.4.1.2)
Glutamate dehydrogenase n=4 Tax=Clostridium butyricum RepID=B1QXD1_CLOBU
Glutamate dehydrogenase {ECO:0000256|PIRNR:PIRNR000185}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_123_000G1_scaffold_155_24
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28638..30026
DNA (1389bp) protein (463aa)
N-acetylglucosaminyltransferase {ECO:0000313|EMBL:KJZ87540.1}; EC=2.4.1.- {ECO:0000313|EMBL:KJZ87540.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Glycosyl transferase, family 2 n=2 Tax=Clostridium butyricum RepID=M8KAV9_CLOBU
glycosyl transferase family protein
L3_123_000G1_scaffold_155_25
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30603..32552
DNA (1950bp) protein (650aa)
DNA gyrase subunit B {ECO:0000313|EMBL:EEP55547.1}; EC=5.99.1.3 {ECO:0000313|EMBL:EEP55547.1};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
DNA gyrase subunit B n=3 Tax=Clostridium butyricum RepID=B1QXC9_CLOBU
DNA topoisomerase IV subunit B
L3_123_000G1_scaffold_155_26
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


32618..35533
DNA (2916bp) protein (972aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A4U6_CLOBU
DNA topoisomerase IV subunit A
L3_123_000G1_scaffold_155_27
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35730..36284
DNA (555bp) protein (185aa)
UPI0003AAC03D related cluster n=1 Tax=unknown RepID=UPI0003AAC03D
Uncharacterized protein {ECO:0000313|EMBL:KJZ97633.1}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
DJ-1 family protein
L3_123_000G1_scaffold_155_28
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36348..38114
DNA (1767bp) protein (589aa)
Single-stranded-DNA-specific exonuclease RecJ {ECO:0000313|EMBL:KJZ87557.1}; EC=3.1.-.- {ECO:0000313|EMBL:KJZ87557.1};; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
recJ2; single-stranded-DNA-specific exonuclease RecJ (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YV86_CLOBU
L3_123_000G1_scaffold_155_29
Clostridium sp. IBUN13A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

38556..39608
DNA (1053bp) protein (351aa)
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082867}; EC=2.4.1.227 {ECO:0000256|HAMAP-Rule:MF_00033, ECO:0000256|SAAS:SAAS00082938};; Undecaprenyl-PP-MurNAc-pentapeptide-UDPGlcNAc GlcNAc transferase {ECO:0000256|HAMAP-Rule:MF_00033}; TaxID=1523156 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN13A.;"
UDP-N-acetylglucosamine--N-acetylmuramyl-(pentapeptide) pyrophosphoryl-undecaprenol N-acetylglucosamine transferase n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YVP1_CLOBU
murG; undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase
L3_123_000G1_scaffold_155_30
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

39761..40186
DNA (426bp) protein (142aa)
UPI0003D64940 related cluster n=1 Tax=unknown RepID=UPI0003D64940
Flavodoxin {ECO:0000313|EMBL:KJZ87581.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
putative flavoprotein
Displaying items 1-30 of 174 in total

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