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L3_123_000G1_scaffold_227

Search features with annotation key words

Displaying items 1-30 of 88 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_227_1
Thiorhodococcus drewsii, Thiorhodococcus, Chromatiales, Gammaproteobacteria, Proteobacteria, Bacteria

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14..283
DNA (270bp) protein (90aa)
HNH endonuclease n=1 Tax=Thiorhodococcus drewsii AZ1 RepID=G2E2F8_9GAMM
HNH endonuclease {ECO:0000313|EMBL:EGV30874.1}; TaxID=765913 species="Bacteria; Proteobacteria; Gammaproteobacteria; Chromatiales; Chromatiaceae; Thiorhodococcus.;" source="Thiorhodococcus drewsii AZ1.;"
HNH endonuclease
L3_123_000G1_scaffold_227_2
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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280..1371
DNA (1092bp) protein (364aa)
Diaminohydroxyphosphoribosylaminopyrimidine deaminase (EC:3.5.4.26)
Riboflavin biosynthesis protein RibD n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y8F6_9BURK
Riboflavin biosynthesis protein RibD {ECO:0000256|PIRNR:PIRNR006769}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L3_123_000G1_scaffold_227_3
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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1398..2003
DNA (606bp) protein (202aa)
Riboflavin synthase, alpha subunit n=3 Tax=Burkholderiales RepID=D9Y8F5_9BURK
Riboflavin synthase alpha subunit {ECO:0000313|EMBL:CCX86750.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
riboflavin synthase subunit alpha
L3_123_000G1_scaffold_227_4
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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2110..2595
DNA (486bp) protein (162aa)
6,7-dimethyl-8-ribityllumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795}; Short=DMRL synthase {ECO:0000256|HAMAP-Rule:MF_00178};; Short=LS {ECO:0000256|HAMAP-Rule:MF_00178};; Short=Lumazine synthase {ECO:0000256|HAMAP-Rule:MF_00178};; EC=2.5.1.78 {ECO:0000256|HAMAP-Rule:MF_00178, ECO:0000256|RuleBase:RU003795};; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
ribH; 6,7-dimethyl-8-ribityllumazine synthase (EC:2.5.1.9)
6,7-dimethyl-8-ribityllumazine synthase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AQD8_9PROT
L3_123_000G1_scaffold_227_5
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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2615..3076
DNA (462bp) protein (154aa)
N utilization substance protein B homolog n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y8F3_9BURK
N utilization substance protein B homolog {ECO:0000256|HAMAP-Rule:MF_00073, ECO:0000256|SAAS:SAAS00057003}; Short=Protein NusB {ECO:0000256|HAMAP-Rule:MF_00073};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
N utilization substance B
L3_123_000G1_scaffold_227_6
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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3076..4113
DNA (1038bp) protein (346aa)
thiL; thiamine-monophosphate kinase ThiL (EC:2.7.4.16)
Thiamine-phosphate kinase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZXA2_9PROT
Thiamine-phosphate kinase {ECO:0000313|EMBL:CDA43375.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
L3_123_000G1_scaffold_227_7
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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4291..4650
DNA (360bp) protein (120aa)
Phosphatidylglycerophosphatase A {ECO:0000256|PIRNR:PIRNR006162}; EC=3.1.3.27 {ECO:0000256|PIRNR:PIRNR006162};; Phosphatidylglycerolphosphate phosphatase A {ECO:0000256|PIRNR:PIRNR006162}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
putative phosphatidylglycerophosphatase A (EC:3.1.3.27)
Phosphatidylglycerophosphatase A n=2 Tax=Parasutterella RepID=F3QN61_9BURK
L3_123_000G1_scaffold_227_8
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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4650..5138
DNA (489bp) protein (163aa)
Competence/damage-inducible protein CinA domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZV94_9PROT
Competence/damage-inducible protein CinA domain protein {ECO:0000313|EMBL:CDA43373.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
CinA domain-containing protein
L3_123_000G1_scaffold_227_9
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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5141..6466
DNA (1326bp) protein (442aa)
CBS domain protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6AQD2_9PROT
CBS domain protein {ECO:0000313|EMBL:CDA43372.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_123_000G1_scaffold_227_10
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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6748..7716
DNA (969bp) protein (323aa)
Auxin efflux carrier (AEC) family putative malate permease n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZU48_9PROT
Auxin efflux carrier (AEC) family putative malate permease {ECO:0000313|EMBL:CDA42933.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_123_000G1_scaffold_227_11
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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7899..9146
DNA (1248bp) protein (416aa)
Peptidase, M48 family {ECO:0000313|EMBL:EFL83768.1}; EC=3.4.24.- {ECO:0000313|EMBL:EFL83768.1};; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
Peptidase, M48 family n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y472_9BURK
peptidase M48 family protein
L3_123_000G1_scaffold_227_12
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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9327..9734
DNA (408bp) protein (136aa)
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5E4V6_9BURK
Acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase {ECO:0000313|EMBL:CCX87570.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
peptidase C45 acyl-coenzyme A:6-aminopenicillanic acid acyl-transferase
L3_123_000G1_scaffold_227_13
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(9789..10196)
DNA (408bp) protein (136aa)
Conserved domain protein n=2 Tax=Parasutterella RepID=F3QN58_9BURK
Conserved domain protein {ECO:0000313|EMBL:CCX86740.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
L3_123_000G1_scaffold_227_14
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(10198..10614)
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZX97_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA43370.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_123_000G1_scaffold_227_15
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(10619..10921)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A3K0_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA43369.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
L3_123_000G1_scaffold_227_16
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

Not on your lists

comp(10955..12598)
DNA (1644bp) protein (548aa)
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R5ZV90_9PROT
D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase {ECO:0000313|EMBL:CDA43368.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
D-alanyl-D-alanine carboxypeptidase PBP3
L3_123_000G1_scaffold_227_17
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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12894..13181
DNA (288bp) protein (96aa)
10 kDa chaperonin n=4 Tax=Proteobacteria RepID=D9Y8E4_9BURK
10 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00580, ECO:0000256|RuleBase:RU000535}; GroES protein {ECO:0000256|HAMAP-Rule:MF_00580}; Protein Cpn10 {ECO:0000256|HAMAP-Rule:MF_00580}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
groES; co-chaperonin GroES
L3_123_000G1_scaffold_227_18
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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13225..14859
DNA (1635bp) protein (545aa)
60 kDa chaperonin n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A3J4_9PROT
60 kDa chaperonin {ECO:0000256|HAMAP-Rule:MF_00600, ECO:0000256|RuleBase:RU000419}; GroEL protein {ECO:0000256|HAMAP-Rule:MF_00600}; Protein Cpn60 {ECO:0000256|HAMAP-Rule:MF_00600}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
groEL; molecular chaperone GroEL
L3_123_000G1_scaffold_227_19
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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15224..16999
DNA (1776bp) protein (592aa)
histidine kinase (EC:2.7.3.-)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y4A1_9BURK
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:EFL83797.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
L3_123_000G1_scaffold_227_20
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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16996..17622
DNA (627bp) protein (209aa)
Putative transcriptional regulatory protein FixJ n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y4A0_9BURK
Putative transcriptional regulatory protein FixJ {ECO:0000313|EMBL:EFL83796.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
LuxR family two component transcriptional regulator
L3_123_000G1_scaffold_227_21
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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17625..19043
DNA (1419bp) protein (473aa)
Fumarate reductase flavoprotein subunit n=1 Tax=Parasutterella excrementihominis CAG:233 RepID=R5EF71_9BURK
Fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:CCX86701.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
fumarate reductase flavoprotein subunit
L3_123_000G1_scaffold_227_22
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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19140..20615
DNA (1476bp) protein (492aa)
Putative fumarate reductase flavoprotein subunit n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y498_9BURK
Putative fumarate reductase flavoprotein subunit {ECO:0000313|EMBL:EFL83794.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
fumarate reductase flavoprotein subunit precursor
L3_123_000G1_scaffold_227_23
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(20747..21847)
DNA (1101bp) protein (367aa)
Adenosine deaminase n=2 Tax=Burkholderiales RepID=R5EFC0_9BURK
Putative adenosine deaminase {ECO:0000313|EMBL:EFL82281.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
adenosine deaminase
L3_123_000G1_scaffold_227_24
Parasutterella excrementihominis, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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22052..23422
DNA (1371bp) protein (457aa)
Putative anaerobic C4-dicarboxylate transporter DcuC n=3 Tax=Burkholderiales RepID=D9Y793_9BURK
Putative anaerobic C4-dicarboxylate transporter DcuC {ECO:0000313|EMBL:EGG53496.1}; TaxID=762966 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella.;" source="Parasutterella excrementihominis YIT 11859.;"
dcuC; putative anaerobic C4-dicarboxylate transporter DcuC
L3_123_000G1_scaffold_227_25
Parasutterella excrementihominis CAG:233, Parasutterella, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23833..24795)
DNA (963bp) protein (321aa)
LysR substrate binding domain protein n=2 Tax=Parasutterella RepID=R5EGK4_9BURK
LysR substrate binding domain protein {ECO:0000313|EMBL:CCX87912.1}; TaxID=1263099 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Sutterellaceae; Parasutterella; environmental samples.;" source="Parasutterella excrementihominis CAG:233.;"
transcriptional regulator, LysR family
L3_123_000G1_scaffold_227_26
Burkholderiales bacterium 1_1_47, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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24897..26261
DNA (1365bp) protein (455aa)
Flavocytochrome c n=1 Tax=Burkholderiales bacterium 1_1_47 RepID=D9Y5B9_9BURK
Flavocytochrome c {ECO:0000313|EMBL:EFL83134.1}; TaxID=469610 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales.;" source="Burkholderiales bacterium 1_1_47.;"
succinate dehydrogenase/fumarate reductase flavoprotein subunit
L3_123_000G1_scaffold_227_27
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(26473..27225)
DNA (753bp) protein (251aa)
ABC transporter ATP-binding protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A6Y8_9PROT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CDA44579.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
ABC transporter-like protein
L3_123_000G1_scaffold_227_28
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(27213..27695)
DNA (483bp) protein (161aa)
Cobalt transport protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6ATZ4_9PROT
Cobalt transport protein {ECO:0000313|EMBL:CDA44577.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
cobalt ABC transporter permease
L3_123_000G1_scaffold_227_29
unknown

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27799..28059
DNA (261bp) protein (87aa)

This feature has no annotations

L3_123_000G1_scaffold_227_30
Proteobacteria bacterium CAG:139, Proteobacteria, Bacteria

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comp(27954..28586)
DNA (633bp) protein (211aa)
Uncharacterized protein n=1 Tax=Proteobacteria bacterium CAG:139 RepID=R6A0N1_9PROT
Uncharacterized protein {ECO:0000313|EMBL:CDA44575.1}; TaxID=1262986 species="Bacteria; Proteobacteria; environmental samples.;" source="Proteobacteria bacterium CAG:139.;"
hypothetical protein
Displaying items 1-30 of 88 in total

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