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L3_123_000G1_scaffold_312

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Displaying items 1-30 of 74 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_312_1
Bacteroides uniformis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

3..326
DNA (324bp) protein (108aa)
Response regulator receiver domain protein n=8 Tax=Bacteroidales RepID=D4VSU5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS08723.1}; TaxID=1235787 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides uniformis dnLKV2.;"
Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains
L3_123_000G1_scaffold_312_2
Barnesiella intestinihominis, Barnesiella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(469..1479)
DNA (1011bp) protein (337aa)
Site-specific recombinase, phage integrase family n=3 Tax=Bacteroidales RepID=D4VNQ6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EJZ64793.1}; TaxID=742726 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Barnesiella.;" source="Barnesiella intestinihominis YIT 11860.;"
putative bacteriophage integrase
L3_123_000G1_scaffold_312_3
Bacteroides fragilis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1564..2469)
DNA (906bp) protein (302aa)
DNA-binding protein n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI0002E1287F
DNA binding , excisionase family domain protein {ECO:0000313|EMBL:EXZ86819.1}; TaxID=1339273 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides fragilis str. B1 (UDC16-1).;"
DNA binding domain, excisionase family
L3_123_000G1_scaffold_312_4
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(2720..4114)
DNA (1395bp) protein (465aa)
tRNA modification GTPase MnmE {ECO:0000256|HAMAP-Rule:MF_00379}; EC=3.6.-.- {ECO:0000256|HAMAP-Rule:MF_00379};; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
tRNA modification GTPase MnmE n=3 Tax=Bacteroidetes RepID=F3Y5F8_9FLAO
tRNA modification GTPase trmE
L3_123_000G1_scaffold_312_5
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4195..4686)
DNA (492bp) protein (164aa)
GAF domain protein n=2 Tax=Bacteroidetes RepID=F3Y5F9_9FLAO
GAF domain protein {ECO:0000313|EMBL:EHG99779.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
GAF sensor protein
L3_123_000G1_scaffold_312_6
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4701..5579)
DNA (879bp) protein (293aa)
Phosphorylase family protein n=2 Tax=Bacteroidetes RepID=F3Y5G0_9FLAO
Phosphorylase family protein {ECO:0000313|EMBL:EHG99778.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
purine or other phosphorylase 1
L3_123_000G1_scaffold_312_7
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5609..6859)
DNA (1251bp) protein (417aa)
WD40-like protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NJ95_9BACT
WD40-like protein {ECO:0000313|EMBL:CCZ02159.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_123_000G1_scaffold_312_8
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7213..8517)
DNA (1305bp) protein (435aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Bacteroidetes RepID=F3Y5G3_9FLAO
putative two component system histidine kinase
L3_123_000G1_scaffold_312_9
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8514..10019)
DNA (1506bp) protein (502aa)
Response regulator/sigma54 interaction protein n=2 Tax=Bacteroidetes RepID=F3Y5G4_9FLAO
Response regulator/sigma54 interaction protein {ECO:0000313|EMBL:EHG99774.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
putative two component system response regulator
L3_123_000G1_scaffold_312_10
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

10073..11563
DNA (1491bp) protein (497aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3Y5G5_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99773.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
outer membrane protein TolC
L3_123_000G1_scaffold_312_11
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

11597..12850
DNA (1254bp) protein (418aa)
Efflux transporter, RND family, MFP subunit n=2 Tax=Bacteroidetes RepID=F3Y5G6_9FLAO
Efflux transporter, RND family, MFP subunit {ECO:0000313|EMBL:EHG99772.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_123_000G1_scaffold_312_12
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

12874..15345
DNA (2472bp) protein (824aa)
Efflux ABC transporter, permease protein n=2 Tax=Bacteroidetes RepID=G5SSY4_9BACT
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EHG99771.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
putative ABc transport system, membrane protein
L3_123_000G1_scaffold_312_13
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15379..15507
DNA (129bp) protein (43aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara YIT 11840 RepID=G5SSY3_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EHG99770.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L3_123_000G1_scaffold_312_14
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15523..17997
DNA (2475bp) protein (825aa)
Efflux ABC transporter, permease protein n=1 Tax=Capnocytophaga sp. oral taxon 329 str. F0087 RepID=F3Y5G8_9FLAO
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EHG99769.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ABC-type transport system, involved in lipoprotein release, permease component
L3_123_000G1_scaffold_312_15
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18031..18729
DNA (699bp) protein (233aa)
ABC transporter, ATP-binding protein n=3 Tax=Bacteroidetes RepID=F3Y5G9_9FLAO
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCZ01496.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
putative ABC transporter ATP-binding protein
L3_123_000G1_scaffold_312_16
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18744..21197
DNA (2454bp) protein (818aa)
Efflux ABC transporter, permease protein n=2 Tax=Bacteroidetes RepID=F3Y5H0_9FLAO
Efflux ABC transporter, permease protein {ECO:0000313|EMBL:EHG99767.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
putative ABC transport system, membrane protein
L3_123_000G1_scaffold_312_17
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21292..21786)
DNA (495bp) protein (165aa)
Exonuclease n=2 Tax=Bacteroidetes RepID=F3Y5H1_9FLAO
Exonuclease {ECO:0000313|EMBL:EHG99766.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
DNA polymerase III subunit epsilon
L3_123_000G1_scaffold_312_18
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

21992..22981
DNA (990bp) protein (330aa)
Glycosyl hydrolase, family 43 n=2 Tax=Bacteroidetes RepID=F3Y5H3_9FLAO
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EHG99764.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
xylosidase/arabinosidase
L3_123_000G1_scaffold_312_19
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23049..24038
DNA (990bp) protein (330aa)
Glycosyl hydrolase, family 43 n=3 Tax=Bacteroidetes RepID=G5SSX6_9BACT
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EHG99763.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
xylosidase/arabinosidase
L3_123_000G1_scaffold_312_20
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24260..24988)
DNA (729bp) protein (243aa)
PP-loop family protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5ND89_9BACT
PP-loop family protein {ECO:0000313|EMBL:CCZ02150.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
PP-loop family protein
L3_123_000G1_scaffold_312_21
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25009..25374)
DNA (366bp) protein (122aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3Y5H8_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99760.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
hypothetical protein
L3_123_000G1_scaffold_312_22
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

25553..26683
DNA (1131bp) protein (377aa)
Uncharacterized protein n=2 Tax=Bacteroidetes RepID=F3Y5I0_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99759.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
ATPase
L3_123_000G1_scaffold_312_23
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26785..29142)
DNA (2358bp) protein (786aa)
Glutamate synthase n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NZ67_9BACT
Glutamate synthase {ECO:0000313|EMBL:CCZ02147.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
glutamate synthase (NADPH), homotetrameric
L3_123_000G1_scaffold_312_24
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29180..30469)
DNA (1290bp) protein (430aa)
Serine--tRNA ligase n=2 Tax=Bacteroidetes RepID=F3Y5I2_9FLAO
Serine--tRNA ligase {ECO:0000313|EMBL:EHG99757.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
seryl-tRNA synthetase
L3_123_000G1_scaffold_312_25
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30840..31298
DNA (459bp) protein (153aa)
Conserved domain protein n=2 Tax=Bacteroidetes RepID=F3Y5I4_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:EHG99755.1}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
L3_123_000G1_scaffold_312_26
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31359..33020
DNA (1662bp) protein (554aa)
TrkA protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5NJ82_9BACT
TrkA protein {ECO:0000313|EMBL:CCZ02144.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_123_000G1_scaffold_312_27
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33095..34369
DNA (1275bp) protein (425aa)
Uncharacterized protein n=3 Tax=Bacteroidetes RepID=F3Y5I6_9FLAO
Uncharacterized protein {ECO:0000313|EMBL:CCZ02143.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
hypothetical protein
L3_123_000G1_scaffold_312_28
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(34453..34728)
DNA (276bp) protein (92aa)
50S ribosomal protein L27 n=3 Tax=Bacteroidetes RepID=F3Y5I7_9FLAO
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
rpmA; 50S ribosomal protein L27
L3_123_000G1_scaffold_312_29
Paraprevotella clara, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists


comp(34749..35066)
DNA (318bp) protein (106aa)
50S ribosomal protein L21 n=3 Tax=Bacteroidetes RepID=F3Y5I8_9FLAO
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=762968 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella.;" source="Paraprevotella clara YIT 11840.;"
rplU; 50S ribosomal protein L21
L3_123_000G1_scaffold_312_30
Paraprevotella clara CAG:116, Paraprevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35092..35253
DNA (162bp) protein (54aa)
Uncharacterized protein n=1 Tax=Paraprevotella clara CAG:116 RepID=R5ND80_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ02140.1}; TaxID=1263095 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Paraprevotella; environmental samples.;" source="Paraprevotella clara CAG:116.;"
Displaying items 1-30 of 74 in total

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