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L3_123_000G1_scaffold_443

Search features with annotation key words

Displaying items 1-30 of 57 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_443_1
Bifidobacterium sp. 12_1_47BFAA, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1..219)
DNA (219bp) protein (73aa)
Integrase core domain protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I3V1_BIFLN
transposase
Integrase core domain-containing protein {ECO:0000313|EMBL:EFV36349.1}; TaxID=469594 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium sp. 12_1_47BFAA.;"
L3_123_000G1_scaffold_443_2
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

323..1417
DNA (1095bp) protein (365aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIV2_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL04815.1}; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
L3_123_000G1_scaffold_443_3
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1789..2085
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum LMG 13195 RepID=K2HQZ6_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EKE49858.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
hypothetical protein
L3_123_000G1_scaffold_443_4
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2078..2437
DNA (360bp) protein (120aa)
Uncharacterized protein n=7 Tax=Bifidobacterium RepID=E4VAK7_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CDB21973.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_123_000G1_scaffold_443_5
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2266..2766)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GCA7_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:KFI43266.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_123_000G1_scaffold_443_6
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3454..4542
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAK8_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50650.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
L3_123_000G1_scaffold_443_7
Bifidobacterium callitrichos, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4552..5007
DNA (456bp) protein (152aa)
Uncharacterized protein n=1 Tax=Propionibacterium avidum ATCC 25577 RepID=G4D0J8_9ACTO
Uncharacterized protein {ECO:0000313|EMBL:KFI50872.1}; TaxID=1437609 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium callitrichos DSM 23973.;"
hypothetical protein
L3_123_000G1_scaffold_443_8
unknown

Not on your lists

5531..6055
DNA (525bp) protein (175aa)

This feature has no annotations

L3_123_000G1_scaffold_443_9
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6161..8491)
DNA (2331bp) protein (777aa)
GTP diphosphokinase {ECO:0000313|EMBL:EFR50654.1}; EC=2.7.6.5 {ECO:0000313|EMBL:EFR50654.1};; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
relA; GTP pyrophosphokinase (EC:2.7.6.5)
GTP diphosphokinase n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAL2_BIFBI
L3_123_000G1_scaffold_443_10
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(8641..9129)
DNA (489bp) protein (163aa)
Deoxyuridine 5'-triphosphate nucleotidohydrolase {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071038}; Short=dUTPase {ECO:0000256|HAMAP-Rule:MF_00116};; EC=3.6.1.23 {ECO:0000256|HAMAP-Rule:MF_00116, ECO:0000256|SAAS:SAAS00071036};; dUTP pyrophosphatase {ECO:0000256|HAMAP-Rule:MF_00116}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
Deoxyuridine 5'-triphosphate nucleotidohydrolase n=2 Tax=Bifidobacterium bifidum RepID=E4VAL3_BIFBI
dut; deoxyuridine 5'-triphosphate nucleotidohydrolase
L3_123_000G1_scaffold_443_11
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(9117..9410)
DNA (294bp) protein (98aa)
Uncharacterized protein n=8 Tax=Bifidobacterium RepID=I3WIV9_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO53412.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_123_000G1_scaffold_443_12
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

9560..10615
DNA (1056bp) protein (352aa)
Uncharacterized protein n=4 Tax=Bifidobacterium bifidum RepID=E4VAL5_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:KFI43271.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
L3_123_000G1_scaffold_443_13
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10732..11964)
DNA (1233bp) protein (411aa)
Type I phosphodiesterase / nucleotide pyrophosphatase n=2 Tax=Bifidobacterium bifidum RepID=U2CHR8_BIFBI
Type I phosphodiesterase / nucleotide pyrophosphatase {ECO:0000313|EMBL:EFR50658.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
type I phosphodiesterase/nucleotide pyrophosphatase
L3_123_000G1_scaffold_443_14
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

12113..14785
DNA (2673bp) protein (891aa)
DNA topoisomerase (ATP-hydrolyzing) {ECO:0000256|SAAS:SAAS00075954}; EC=5.99.1.3 {ECO:0000256|SAAS:SAAS00075954};; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
gyrA; DNA gyrase subunit A (EC:5.99.1.3)
GyrA DNA gyrase subunit A n=6 Tax=Bifidobacterium bifidum RepID=E4NXN2_BIFBP
L3_123_000G1_scaffold_443_15
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(15017..19663)
DNA (4647bp) protein (1549aa)
ATP-dependent helicase II n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GK64_9BIFI
ATP-dependent helicase II {ECO:0000313|EMBL:CDB21984.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
lhr; putative ATP-dependent helicase
L3_123_000G1_scaffold_443_16
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19721..19927)
DNA (207bp) protein (69aa)
DNA-binding protein n=4 Tax=Bifidobacterium RepID=U2DUW8_BIFBI
transcriptional regulator
Putative transcriptional regulator {ECO:0000313|EMBL:ADO53417.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_123_000G1_scaffold_443_17
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19929..20366)
DNA (438bp) protein (146aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum ATCC 29521 = JCM 1255 RepID=U2DPS2_BIFBI
Putative transporter protein {ECO:0000313|EMBL:KFI43276.1}; TaxID=1681 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum.;"
hypothetical protein
L3_123_000G1_scaffold_443_18
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

20740..22179
DNA (1440bp) protein (480aa)
aspA; aspartate ammonia-lyase (EC:4.3.1.1)
Aspartate ammonia-lyase {ECO:0000313|EMBL:AFL04829.1}; EC=4.3.1.1 {ECO:0000313|EMBL:AFL04829.1};; TaxID=484020 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum BGN4.;"
Aspartate ammonia-lyase n=1 Tax=Bifidobacterium bifidum BGN4 RepID=I3WIW6_BIFBI
L3_123_000G1_scaffold_443_19
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22260..24572)
DNA (2313bp) protein (771aa)
gyrB; DNA gyrase subunit B (EC:5.99.1.3)
GyrB DNA gyrase subunit B n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6G971_9BIFI
GyrB DNA gyrase subunit B {ECO:0000313|EMBL:CDB21988.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
L3_123_000G1_scaffold_443_20
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(24701..26224)
DNA (1524bp) protein (508aa)
RNA polymerase sigma factor SigA n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GK69_9BIFI
RNA polymerase sigma factor SigA {ECO:0000256|HAMAP-Rule:MF_00963}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
RNA polymerase principal sigma factor HrdB
L3_123_000G1_scaffold_443_21
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(26375..27124)
DNA (750bp) protein (250aa)
Putative uncharacterized protein n=1 Tax=Bifidobacterium bifidum (strain PRL2010) RepID=E4NXN8_BIFBP
Uncharacterized protein {ECO:0000313|EMBL:BAQ98455.1}; TaxID=500634 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum ATCC 29521 = JCM 1255 = DSM 20456.;"
hypothetical protein
L3_123_000G1_scaffold_443_22
Bifidobacterium bifidum CAG:234, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

27244..28341
DNA (1098bp) protein (366aa)
IdsA Polyprenyl synthase n=1 Tax=Bifidobacterium bifidum CAG:234 RepID=R6GL78_9BIFI
IdsA Polyprenyl synthase {ECO:0000313|EMBL:CDB21991.1}; TaxID=1263058 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium bifidum CAG:234.;"
polyprenyl synthetase
L3_123_000G1_scaffold_443_23
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

28406..30547
DNA (2142bp) protein (714aa)
pknA; serine/threonine protein kinase (EC:2.7.11.1)
Kinase domain protein n=3 Tax=Bifidobacterium bifidum RepID=E4VAR8_BIFBI
Kinase domain protein {ECO:0000313|EMBL:EFR50668.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
L3_123_000G1_scaffold_443_24
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30645..31361)
DNA (717bp) protein (239aa)
plsC; 1-acyl-sn-glycerol-3-phosphate acyl transferase (EC:2.3.1.51)
1-acyl-sn-glycerol-3-phosphate acyltransferase n=3 Tax=Bifidobacterium RepID=E3EMZ1_BIFBS
1-acyl-sn-glycerol-3-phosphate acyltransferase {ECO:0000313|EMBL:ADO53425.1}; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
L3_123_000G1_scaffold_443_25
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31410..32009
DNA (600bp) protein (200aa)
Uncharacterized protein n=3 Tax=Bifidobacterium RepID=K2MF36_BIFBI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EKF15877.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_123_000G1_scaffold_443_26
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(32048..33094)
DNA (1047bp) protein (349aa)
Anthranilate phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083107}; EC=2.4.2.18 {ECO:0000256|HAMAP-Rule:MF_00211, ECO:0000256|SAAS:SAAS00083113};; TaxID=883062 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum (strain S17).;"
Anthranilate phosphoribosyltransferase n=1 Tax=Bifidobacterium bifidum (strain S17) RepID=E3EMZ3_BIFBS
trpD; anthranilate phosphoribosyltransferase
L3_123_000G1_scaffold_443_27
unknown

Not on your lists

33152..33952
DNA (801bp) protein (267aa)

This feature has no annotations

L3_123_000G1_scaffold_443_28
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(33786..36740)
DNA (2955bp) protein (985aa)
Protein translocase subunit SecA n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAS2_BIFBI
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
secA; protein translocase subunit secA
L3_123_000G1_scaffold_443_29
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(36880..37545)
DNA (666bp) protein (222aa)
Ribosome-associated factor Y n=8 Tax=Bifidobacterium RepID=E3EMZ5_BIFBS
ribosome-associated factor Y
Ribosome-associated factor Y {ECO:0000313|EMBL:EKE51432.1}; TaxID=1207542 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum LMG 13195.;"
L3_123_000G1_scaffold_443_30
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

37706..37930
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Bifidobacterium bifidum NCIMB 41171 RepID=E4VAS4_BIFBI
Uncharacterized protein {ECO:0000313|EMBL:EFR50673.1}; TaxID=398513 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum NCIMB 41171.;"
hypothetical protein
Displaying items 1-30 of 57 in total

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