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L3_123_000G1_scaffold_2116

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Displaying 26 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_2116_1
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(207..1538)
DNA (1332bp) protein (444aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9S0_9ACTN
L3_123_000G1_scaffold_2116_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1542..3899)
DNA (2358bp) protein (786aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A2W5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75677.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_123_000G1_scaffold_2116_3
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(4039..5061)
DNA (1023bp) protein (341aa)
Putative membrane protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9S2_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI75676.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_123_000G1_scaffold_2116_4
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5192..5917)
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IAM5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33841.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
peptidase S26B, signal peptidase
L3_123_000G1_scaffold_2116_5
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5917..8181)
DNA (2265bp) protein (755aa)
Signal peptidase I n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5IA47_9FIRM
Signal peptidase I {ECO:0000313|EMBL:CCY33842.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
peptidase S26B, signal peptidase
L3_123_000G1_scaffold_2116_6
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(8281..9975)
DNA (1695bp) protein (565aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BS17_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD68262.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
hypothetical protein
L3_123_000G1_scaffold_2116_7
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9968..10717)
DNA (750bp) protein (250aa)
Signal peptidase I n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BR24_9ACTN
Signal peptidase I {ECO:0000313|EMBL:CDD68261.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
peptidase S26B, signal peptidase
L3_123_000G1_scaffold_2116_8
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(10778..11584)
DNA (807bp) protein (269aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BR65_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD68260.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
L3_123_000G1_scaffold_2116_9
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11587..12567)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BR33_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD68259.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
L3_123_000G1_scaffold_2116_10
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(12581..13417)
DNA (837bp) protein (279aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BT72_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD68258.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
L3_123_000G1_scaffold_2116_11
Ruminococcus sp. CAG:60, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13429..14313)
DNA (885bp) protein (295aa)
Uncharacterized protein n=1 Tax=Ruminococcus sp. CAG:60 RepID=R5HVI9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCY33848.1}; TaxID=1262964 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus sp. CAG:60.;"
L3_123_000G1_scaffold_2116_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15015..16028)
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4F840_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP45158.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_123_000G1_scaffold_2116_13
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

16522..17208
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9S3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39591.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
traC; DNA primase
L3_123_000G1_scaffold_2116_14
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17313..17594)
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9S4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39592.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_123_000G1_scaffold_2116_15
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(17713..18795)
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9S5_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39593.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
putative membrane protein
L3_123_000G1_scaffold_2116_16
Firmicutes bacterium CAG:270, Firmicutes, Bacteria

Not on your lists

comp(18918..19877)
DNA (960bp) protein (320aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:270 RepID=R7C6T4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD73028.1}; TaxID=1263014 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:270.;"
L3_123_000G1_scaffold_2116_17
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19966..20946)
DNA (981bp) protein (327aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BQG1_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD68045.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
L3_123_000G1_scaffold_2116_18
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21169..21681
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z9Q7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDA36443.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_123_000G1_scaffold_2116_19
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(21738..22847)
DNA (1110bp) protein (370aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BQD6_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD68046.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
hypothetical protein predicted by Glimmer/Critica
L3_123_000G1_scaffold_2116_20
Eggerthella sp. CAG:368, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22853..23518)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Eggerthella sp. CAG:368 RepID=R7BRC9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:CDD68047.1}; TaxID=1262877 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella; environmental samples.;" source="Eggerthella sp. CAG:368.;"
L3_123_000G1_scaffold_2116_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23648..25123)
DNA (1476bp) protein (492aa)
Divergent AAA domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZIK8_9ACTN
Divergent AAA domain protein {ECO:0000313|EMBL:CDA36444.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
transcriptional regulator
L3_123_000G1_scaffold_2116_22
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

25560..28604
DNA (3045bp) protein (1015aa)
Peptidase M16 inactive domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZNZ9_9ACTN
Peptidase M16 inactive domain protein {ECO:0000313|EMBL:CDA36091.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Peptidase M16C associated domain-containing protein
L3_123_000G1_scaffold_2116_23
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29234..29563
DNA (330bp) protein (110aa)
HicB family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZB87_9ACTN
HicB family protein {ECO:0000313|EMBL:CDA36090.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
HicB
L3_123_000G1_scaffold_2116_24
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29710..30306
DNA (597bp) protein (199aa)
5-formyltetrahydrofolate cyclo-ligase {ECO:0000256|RuleBase:RU361279}; EC=6.3.3.2 {ECO:0000256|RuleBase:RU361279};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
5,10-methenyltetrahydrofolate synthetase (EC:6.3.3.2)
5-formyltetrahydrofolate cyclo-ligase n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZHR5_9ACTN
L3_123_000G1_scaffold_2116_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(30445..31407)
DNA (963bp) protein (321aa)
Tat pathway signal sequence domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T1_9ACTN
Tat pathway signal sequence domain protein {ECO:0000313|EMBL:EBA39599.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_123_000G1_scaffold_2116_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(31858..32442)
DNA (585bp) protein (195aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Homoserine O-succinyltransferase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9T3_9ACTN
homoserine O-succinyltransferase
Displaying 26 items

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