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L3_123_000G1_scaffold_1204

Search features with annotation key words

Displaying items 1-30 of 42 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_1204_1
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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30..935
DNA (906bp) protein (302aa)
Uncharacterized protein n=1 Tax=Collinsella sp. CAG:166 RepID=R6A1X7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71733.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
type III fibronectin
L3_123_000G1_scaffold_1204_2
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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932..2773
DNA (1842bp) protein (614aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9Y0_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71734.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
serine/threonine protein kinase
L3_123_000G1_scaffold_1204_3
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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2777..3715
DNA (939bp) protein (313aa)
FHA domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZF30_9ACTN
FHA domain protein {ECO:0000313|EMBL:CDA35184.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
hypothetical protein
L3_123_000G1_scaffold_1204_4
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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4336..7875
DNA (3540bp) protein (1180aa)
Pyruvate-flavodoxin oxidoreductase {ECO:0000256|PIRNR:PIRNR000159}; EC=1.2.7.- {ECO:0000256|PIRNR:PIRNR000159};; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
Pyruvate-flavodoxin oxidoreductase n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X8_9ACTN
pyruvate ferredoxin/flavodoxin oxidoreductase
L3_123_000G1_scaffold_1204_5
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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8561..9523
DNA (963bp) protein (321aa)
carbamate kinase (EC:2.7.2.2)
Carbamate kinase n=2 Tax=Collinsella RepID=A4E9X5_9ACTN
Carbamate kinase {ECO:0000256|PIRNR:PIRNR000723}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_123_000G1_scaffold_1204_6
Coriobacterium glomerans, Coriobacterium, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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9957..11852
DNA (1896bp) protein (632aa)
transcriptional antiterminator BglG (EC:2.7.1.69)
Transcriptional antiterminator, BglG {ECO:0000313|EMBL:AEB07673.1}; EC=2.7.1.69 {ECO:0000313|EMBL:AEB07673.1};; TaxID=700015 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Coriobacterium.;" source="Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 /; PW2).;"
Transcriptional antiterminator, BglG n=1 Tax=Coriobacterium glomerans (strain ATCC 49209 / DSM 20642 / JCM 10262 / PW2) RepID=F2NAZ5_CORGP
L3_123_000G1_scaffold_1204_7
Collinsella stercoris, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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11972..12298
DNA (327bp) protein (109aa)
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component {ECO:0000313|EMBL:EEA90995.1}; EC=2.7.1.- {ECO:0000313|EMBL:EEA90995.1};; TaxID=445975 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella stercoris DSM 13279.;"
N,N'-diacetylchitobiose-specific phosphotransferase enzyme IIA component n=1 Tax=Collinsella stercoris DSM 13279 RepID=B6G9P8_9ACTN
phosphotransferase system PTS lactose/cellobiose-specific IIA subunit
L3_123_000G1_scaffold_1204_8
Streptococcus sanguinis, Streptococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

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12345..12638
DNA (294bp) protein (98aa)
Beta-glucosides PTS, EIIB (EC:2.7.1.69)
PTS family porter, EIIB component {ECO:0000313|EMBL:EGF15528.1}; EC=2.7.1.69 {ECO:0000313|EMBL:EGF15528.1};; TaxID=888813 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Streptococcaceae; Streptococcus.;" source="Streptococcus sanguinis SK330.;"
Beta-glucosides PTS, EIIB, putative n=4 Tax=Streptococcus sanguinis RepID=A3CN00_STRSV
L3_123_000G1_scaffold_1204_9
Coprobacillus sp. 8_2_54BFAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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12648..13997
DNA (1350bp) protein (450aa)
PTS system, lactose/cellobiose family IIC subunit (EC:2.7.1.69)
PTS system, lactose/cellobiose family IIC component n=2 Tax=Coprobacillus RepID=G9QYY8_9FIRM
Permease IIC component {ECO:0000256|PIRNR:PIRNR006351}; TaxID=469597 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 8_2_54BFAA.;"
L3_123_000G1_scaffold_1204_10
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

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14032..15453
DNA (1422bp) protein (474aa)
6-phospho-beta-glucosidase AscB n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GC22_9FIRM
6-phospho-beta-glucosidase AscB {ECO:0000313|EMBL:EFW04433.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
glycoside hydrolase family 1
L3_123_000G1_scaffold_1204_11
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15845..16453)
DNA (609bp) protein (203aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9X4_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71742.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_123_000G1_scaffold_1204_12
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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17241..18692
DNA (1452bp) protein (484aa)
Amino acid permease n=1 Tax=Collinsella sp. CAG:166 RepID=R6A462_9ACTN
Amino acid permease {ECO:0000313|EMBL:CDA35922.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amino acid permease-associated protein
L3_123_000G1_scaffold_1204_13
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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18823..20100
DNA (1278bp) protein (426aa)
Amidohydrolase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5Z8A5_9ACTN
Amidohydrolase family protein {ECO:0000313|EMBL:CDA35923.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
amidohydrolase
L3_123_000G1_scaffold_1204_14
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

20212..21603
DNA (1392bp) protein (464aa)
signal transduction histidine kinase LytS (EC:2.7.13.3)
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZH67_9ACTN
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein {ECO:0000313|EMBL:CDA35924.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
L3_123_000G1_scaffold_1204_15
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

21642..22376
DNA (735bp) protein (245aa)
Response regulator receiver domain protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZAQ9_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:CDA35925.1}; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
LytTR family two component transcriptional regulator
L3_123_000G1_scaffold_1204_16
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

22469..23413
DNA (945bp) protein (315aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W9_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39637.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_123_000G1_scaffold_1204_17
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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23515..24774
DNA (1260bp) protein (420aa)
Transporter, major facilitator family protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W8_9ACTN
Transporter, major facilitator family protein {ECO:0000313|EMBL:EBA39636.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_123_000G1_scaffold_1204_18
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

24945..26132
DNA (1188bp) protein (396aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W7_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71749.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
hypothetical protein
L3_123_000G1_scaffold_1204_19
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

26129..27472
DNA (1344bp) protein (448aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=2 Tax=Collinsella RepID=A4E9W6_9ACTN
signal transduction histidine kinase LytS
L3_123_000G1_scaffold_1204_20
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

27545..28261
DNA (717bp) protein (239aa)
Response regulator receiver domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W5_9ACTN
Response regulator receiver domain protein {ECO:0000313|EMBL:EBA39633.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
LytTR family two component transcriptional regulator
L3_123_000G1_scaffold_1204_21
Collinsella sp. CAG:166, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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28356..28823
DNA (468bp) protein (156aa)
Phosphoesterase {ECO:0000256|RuleBase:RU362039}; EC=3.1.4.- {ECO:0000256|RuleBase:RU362039};; TaxID=1262850 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella; environmental samples.;" source="Collinsella sp. CAG:166.;"
Phosphodiesterase family protein n=1 Tax=Collinsella sp. CAG:166 RepID=R5ZBE7_9ACTN
phosphodiesterase, MJ0936 family
L3_123_000G1_scaffold_1204_22
unknown

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comp(28733..29326)
DNA (594bp) protein (198aa)

This feature has no annotations

L3_123_000G1_scaffold_1204_23
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29755..29940
DNA (186bp) protein (62aa)
Transcriptional regulator, Rrf2 family n=2 Tax=Collinsella RepID=A4E9W3_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:KGI71753.1}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
asnc family transcriptional regulator
L3_123_000G1_scaffold_1204_24
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

29962..30867
DNA (906bp) protein (302aa)
A/G-specific DNA-adenine glycosylase (EC:3.2.2.-)
Base excision DNA repair protein, HhH-GPD family n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W2_9ACTN
Base excision DNA repair protein, HhH-GPD family {ECO:0000313|EMBL:EBA39630.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
L3_123_000G1_scaffold_1204_25
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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30982..31521
DNA (540bp) protein (180aa)
Rubrerythrin n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9W1_9ACTN
Rubrerythrin {ECO:0000313|EMBL:EBA39629.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
rubrerythrin
L3_123_000G1_scaffold_1204_26
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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31964..32386
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V8_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EBA39626.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
di-heme cytochrome c peroxidase
L3_123_000G1_scaffold_1204_27
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

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32510..33865
DNA (1356bp) protein (452aa)
RmuC domain protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V7_9ACTN
RmuC domain protein {ECO:0000313|EMBL:EBA39625.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
hypothetical protein
L3_123_000G1_scaffold_1204_28
Collinsella aerofaciens, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

33991..35793
DNA (1803bp) protein (601aa)
ABC transporter, ATP-binding protein n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V5_9ACTN
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EBA39623.1}; TaxID=411903 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella aerofaciens ATCC 25986.;"
ABC transporter
L3_123_000G1_scaffold_1204_29
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

35857..36522
DNA (666bp) protein (222aa)
Endonuclease III {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435}; EC=4.2.99.18 {ECO:0000256|HAMAP-Rule:MF_00942, ECO:0000256|PIRNR:PIRNR001435};; DNA-(apurinic or apyrimidinic site) lyase {ECO:0000256|HAMAP-Rule:MF_00942}; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
DNA-(apurinic or apyrimidinic site) lyase (EC:4.2.99.18 3.2.2.-)
Endonuclease III n=2 Tax=Collinsella RepID=A4E9V4_9ACTN
L3_123_000G1_scaffold_1204_30
Collinsella sp. 4_8_47FAA, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

36643..40275
DNA (3633bp) protein (1211aa)
Transcription-repair-coupling factor {ECO:0000256|HAMAP-Rule:MF_00969}; Short=TRCF {ECO:0000256|HAMAP-Rule:MF_00969};; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_00969};; TaxID=742722 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella sp. 4_8_47FAA.;"
Transcription-repair-coupling factor n=1 Tax=Collinsella aerofaciens ATCC 25986 RepID=A4E9V3_9ACTN
transcription-repair coupling factor
Displaying items 1-30 of 42 in total

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