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L3_123_000G1_scaffold_2172

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Displaying 13 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_2172_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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133..804
DNA (672bp) protein (224aa)
SnoaL-like polyketide cyclase family protein n=2 Tax=Clostridium difficile RepID=T3B6G9_CLODI
conserved hypothetical protein
SnoaL-like polyketide cyclase family protein {ECO:0000313|EMBL:EQG78069.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_123_000G1_scaffold_2172_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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842..2254
DNA (1413bp) protein (471aa)
SnoaL-like polyketide cyclase n=7 Tax=Clostridium difficile RepID=G6BAG5_CLODI
SnoaL-like polyketide cyclase {ECO:0000313|EMBL:EHJ28093.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
snoal-like polyketide cyclase
L3_123_000G1_scaffold_2172_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2399..3664
DNA (1266bp) protein (422aa)
Transporter, major facilitator family protein n=8 Tax=Clostridium difficile RepID=G6BAG6_CLODI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHJ28092.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Transporter, Major Facilitator Superfamily(MFS)
L3_123_000G1_scaffold_2172_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3682..5304
DNA (1623bp) protein (541aa)
Putative sodium:solute symporter n=3 Tax=Clostridium difficile RepID=U3W8V2_CLODI
Putative sodium:solute symporter {ECO:0000313|EMBL:CCL20793.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative sodium:solute symporter
L3_123_000G1_scaffold_2172_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5339..6361
DNA (1023bp) protein (341aa)
Periplasmic binding s and sugar binding domain of LacI family protein n=178 Tax=Clostridium difficile RepID=T3I765_CLODC
Transcriptional regulator, LacI family
Sugar-binding domain protein {ECO:0000313|EMBL:EHJ28041.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_123_000G1_scaffold_2172_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6806..8209)
DNA (1404bp) protein (468aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1225722 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E1.;"
ATP-dependent zinc metalloprotease FtsH n=16 Tax=Clostridium difficile RepID=D5Q0R1_CLODI
ATP-dependent peptidase
L3_123_000G1_scaffold_2172_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9239..9664
DNA (426bp) protein (142aa)
Translation initiation factor IF-3 n=213 Tax=Clostridium difficile RepID=Q189N1_CLOD6
infC; translation initiation factor IF-3
Translation initiation factor IF-3 {ECO:0000256|RuleBase:RU000646}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L3_123_000G1_scaffold_2172_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9692..9886
DNA (195bp) protein (65aa)
50S ribosomal protein L35 n=209 Tax=Clostridium difficile RepID=RL35_CLOD6
50S ribosomal protein L35
50S ribosomal protein L35 {ECO:0000256|HAMAP-Rule:MF_00514, ECO:0000256|RuleBase:RU000568}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L3_123_000G1_scaffold_2172_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9941..10297
DNA (357bp) protein (119aa)
50S ribosomal protein L20 n=115 Tax=Clostridium difficile RepID=RL20_CLOD6
rplT; 50S ribosomal protein L20
50S ribosomal protein L20 {ECO:0000256|HAMAP-Rule:MF_00382, ECO:0000256|RuleBase:RU000560}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_2172_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10607..11152
DNA (546bp) protein (182aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6BAH3_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ28085.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_2172_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11589..13514
DNA (1926bp) protein (642aa)
Uncharacterized protein n=2 Tax=Clostridium difficile RepID=D5Q0R9_CLODI
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EHJ28084.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
putative nucleotide phosphodiesterase
L3_123_000G1_scaffold_2172_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13909..15813
DNA (1905bp) protein (635aa)
Ser/Thr phosphatase family protein n=7 Tax=Clostridium difficile RepID=G6BB00_CLODI
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:EHJ28083.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
nucleotide phosphodiesterase
L3_123_000G1_scaffold_2172_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16273..17052
DNA (780bp) protein (260aa)
Putative short chain dehydrogenase/reductase,SDRfamily {ECO:0000313|EMBL:CEJ97235.1}; Short chain dehydrogenase {ECO:0000313|EMBL:CKH62640.1}; EC=1.-.-.- {ECO:0000313|EMBL:CKH62640.1};; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
Short chain dehydrogenase family protein n=36 Tax=Clostridium difficile RepID=T3I7Q1_CLODC
putative short chain dehydrogenase/reductase,SDRfamily
Displaying 13 items

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