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L3_123_000G1_scaffold_31

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Displaying items 1-30 of 199 in total
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_31_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..312
DNA (312bp) protein (104aa)
Peptidase M20/M25/M40 family protein n=1 Tax=Clostridium difficile CD165 RepID=T3DZK9_CLODI
peptidase
Putative peptidase, M20 family {ECO:0000313|EMBL:CAJ68969.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_123_000G1_scaffold_31_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

445..1815
DNA (1371bp) protein (457aa)
D-hydantoinase (EC:3.5.2.2)
Dihydropyrimidinase n=8 Tax=Clostridium difficile RepID=G6B951_CLODI
Dihydropyrimidinase {ECO:0000313|EMBL:EHJ27461.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_31_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1815..3239
DNA (1425bp) protein (475aa)
Amidohydrolase family protein n=8 Tax=Clostridium difficile RepID=G6B950_CLODI
Amidohydrolase family protein {ECO:0000313|EMBL:EHJ27462.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
amidohydrolase
L3_123_000G1_scaffold_31_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3290..3757
DNA (468bp) protein (156aa)
Xanthine dehydrogenase iron-sulfur binding subunit n=5 Tax=Clostridium difficile RepID=C9XJU6_CLODC
xdhC; xanthine dehydrogenase iron-sulfur binding subunit
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:EHJ29506.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_123_000G1_scaffold_31_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3796..4590
DNA (795bp) protein (265aa)
putative FAD-binding subunit of xanthinedehydrogenase (EC:1.17.1.4)
FAD binding domain in molybdopterin dehydrogenase family protein n=84 Tax=Clostridium difficile RepID=T3GK16_CLODC
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:EHJ27464.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_31_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4580..6871
DNA (2292bp) protein (764aa)
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:CCL22356.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CCL22356.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Xanthine dehydrogenase, molybdenum binding subunit n=1 Tax=Clostridium difficile CD002 RepID=U3W0X8_CLODI
xdhA2; xanthine dehydrogenase, molybdenum binding subunit
L3_123_000G1_scaffold_31_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6872..8185
DNA (1314bp) protein (438aa)
putative S-adenosylhomocysteine deaminase (EC:3.5.4.28)
Amidohydrolase family protein n=8 Tax=Clostridium difficile RepID=G6B946_CLODI
Amidohydrolase family protein {ECO:0000313|EMBL:EHJ27466.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_31_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8221..9306
DNA (1086bp) protein (362aa)
4Fe-4S binding domain protein n=8 Tax=Clostridium difficile RepID=G6B945_CLODI
4Fe-4S binding domain protein {ECO:0000313|EMBL:EHJ27467.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
pyrD; dihydroorotate dehydrogenase, catalytic subunit
L3_123_000G1_scaffold_31_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9539..10540
DNA (1002bp) protein (334aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=G6BKB7_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27468.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
conserved hypothetical protein
L3_123_000G1_scaffold_31_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11886..13244
DNA (1359bp) protein (453aa)
Permease family protein n=7 Tax=Clostridium difficile RepID=T3FN63_CLODI
Putative permease {ECO:0000313|EMBL:EHJ29783.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
pbuX; putative xanthine permease
L3_123_000G1_scaffold_31_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13352..14146
DNA (795bp) protein (265aa)
Putative FAD-binding subunit of xanthine dehydrogenase n=1 Tax=Clostridium difficile CD002 RepID=U3W0X4_CLODI
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:EHJ29782.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
xanthine dehydrogenase FAD-binding subunit
L3_123_000G1_scaffold_31_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14139..16445
DNA (2307bp) protein (769aa)
xdhA; Xanthine dehydrogenase, molybdenum bindingsubunit (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=8 Tax=Clostridium difficile RepID=G6B940_CLODI
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein {ECO:0000313|EMBL:EHJ27471.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_31_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16548..17861
DNA (1314bp) protein (438aa)
Transposase, IS605 OrfB family n=8 Tax=Clostridium difficile RepID=G6B939_CLODI
Transposase, IS605 OrfB family {ECO:0000313|EMBL:EHJ27472.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
transposase
L3_123_000G1_scaffold_31_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18044..18766
DNA (723bp) protein (241aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD002 RepID=U3W3C0_CLODI
Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EHJ27473.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_31_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18873..19442
DNA (570bp) protein (190aa)
Molybdenum hydroxylase accessory protein, YgfJ family n=8 Tax=Clostridium difficile RepID=G6B937_CLODI
Molybdenum hydroxylase accessory protein, YgfJ family {ECO:0000313|EMBL:EHJ27474.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
molybdopterin-guanine dinucleotide biosynthesis protein
L3_123_000G1_scaffold_31_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19439..20458
DNA (1020bp) protein (340aa)
Molybdopterin binding domain protein n=7 Tax=Clostridium difficile RepID=G6B936_CLODI
molybdopterin biosynthesis protein
Molybdopterin binding domain protein {ECO:0000313|EMBL:EHJ27475.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_31_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20794..22419
DNA (1626bp) protein (542aa)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CCL22344.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL22344.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC transporter family protein n=157 Tax=Clostridium difficile RepID=C9XJT3_CLODC
ABC transporter ATP-binding protein
L3_123_000G1_scaffold_31_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22618..23067
DNA (450bp) protein (150aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6B934_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ29775.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
conserved hypothetical protein
L3_123_000G1_scaffold_31_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23275..24417)
DNA (1143bp) protein (381aa)
Site-specific recombinase, phage integrase family n=9 Tax=Clostridium difficile RepID=G6B933_CLODI
Site-specific recombinase, phage integrase family {ECO:0000313|EMBL:EHJ27478.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
integrase
L3_123_000G1_scaffold_31_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24726..25103
DNA (378bp) protein (126aa)
Penicillinase repressor family protein n=213 Tax=Clostridium difficile RepID=C9XJT0_CLODC
regulatory protein
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EHJ29773.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_123_000G1_scaffold_31_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25540..25803)
DNA (264bp) protein (88aa)
Uncharacterized protein n=22 Tax=Clostridium difficile RepID=C9XJS9_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ29772.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_123_000G1_scaffold_31_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26119..26694
DNA (576bp) protein (192aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6B930_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ29771.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_31_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26792..27790
DNA (999bp) protein (333aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=G6B929_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27482.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_31_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28131..28769
DNA (639bp) protein (213aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=G6B928_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27483.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_31_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28796..29695
DNA (900bp) protein (300aa)
Lipid kinase, YegS/Rv2252/BmrU family protein n=7 Tax=Clostridium difficile RepID=T3FNY1_CLODI
Putative lipid kinase {ECO:0000313|EMBL:EHJ27484.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
lipid kinase
L3_123_000G1_scaffold_31_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29802..31466)
DNA (1665bp) protein (555aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
glnS; Glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=179 Tax=Clostridium difficile RepID=SYQ_CLOD6
L3_123_000G1_scaffold_31_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31758..32471
DNA (714bp) protein (238aa)
Uncharacterized protein n=1 Tax=Clostridium difficile CD002 RepID=U3W1B9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27486.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_31_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32628..33194
DNA (567bp) protein (189aa)
Uncharacterized protein n=211 Tax=Clostridium difficile RepID=C9XJS2_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ98652.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_123_000G1_scaffold_31_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33583..35283
DNA (1701bp) protein (567aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6B923_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27488.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_31_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35453..36070
DNA (618bp) protein (206aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6BKD8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ27489.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
Displaying items 1-30 of 199 in total

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