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L3_123_000G1_scaffold_620

Search features with annotation key words

Displaying items 1-30 of 43 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_620_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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422..835
DNA (414bp) protein (138aa)
Uncharacterized protein n=8 Tax=Clostridium difficile RepID=G6B368_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ32590.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_620_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

845..940
DNA (96bp) protein (32aa)
Uncharacterised protein {ECO:0000313|EMBL:CKH92086.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_123_000G1_scaffold_620_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1144..4575
DNA (3432bp) protein (1144aa)
Pyruvate carboxylase {ECO:0000256|PIRNR:PIRNR001594}; EC=6.4.1.1 {ECO:0000256|PIRNR:PIRNR001594};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Pyruvate carboxylase n=141 Tax=Clostridium difficile RepID=C9XID3_CLODC
pyc; pyruvate carboxylase
L3_123_000G1_scaffold_620_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4608..4757
DNA (150bp) protein (50aa)
Uncharacterized protein n=18 Tax=Clostridium difficile RepID=G6B366_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ34515.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_123_000G1_scaffold_620_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4817..6745
DNA (1929bp) protein (643aa)
Elongation factor G (EF-G) n=181 Tax=Clostridium difficile RepID=Q18CA6_CLOD6
putative translation elongation factor
Small GTP-binding domain protein {ECO:0000313|EMBL:EQE71059.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_123_000G1_scaffold_620_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6825..6947
DNA (123bp) protein (41aa)
Uncharacterized protein n=5 Tax=Clostridium difficile RepID=G6B364_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ34513.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_123_000G1_scaffold_620_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7202..7666
DNA (465bp) protein (155aa)
Transcriptional regulator n=211 Tax=Clostridium difficile RepID=C9XID5_CLODC
transcriptional regulator CtsR
Firmicute transcriptional repressor of class III stress {ECO:0000313|EMBL:EHJ32585.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_620_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7673..8167
DNA (495bp) protein (165aa)
Activator of protein kinase McsB n=212 Tax=Clostridium difficile RepID=Q18CA7_CLOD6
mcsA; activator of protein kinase McsB
Uncharacterized protein {ECO:0000313|EMBL:EHJ34511.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_123_000G1_scaffold_620_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8183..9208
DNA (1026bp) protein (342aa)
Protein-arginine kinase {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166216}; EC=2.7.14.1 {ECO:0000256|HAMAP-Rule:MF_00602, ECO:0000256|SAAS:SAAS00166206};; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Putative ATP:guanido phosphotransferase QEE_0026 n=1 Tax=Clostridium difficile CD113 RepID=T4YM09_CLODI
ATP:guanido phosphotransferase
L3_123_000G1_scaffold_620_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9195..11642
DNA (2448bp) protein (816aa)
Negative regulator of genetic competence ClpC/MecB n=167 Tax=Clostridium difficile RepID=T3IQT9_CLODC
clpC; class III stress response-related ATPase
Class III stress response-related ATPase, AAA+ superfamily {ECO:0000313|EMBL:CCL24565.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_123_000G1_scaffold_620_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11822..13195
DNA (1374bp) protein (458aa)
radA; DNA repair protein (EC:2.1.1.63)
DNA repair protein {ECO:0000313|EMBL:CAJ66841.1}; EC=2.1.1.63 {ECO:0000313|EMBL:CAJ66841.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
DNA repair protein radA n=160 Tax=Clostridium difficile RepID=T3IME1_CLODC
L3_123_000G1_scaffold_620_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13198..14268
DNA (1071bp) protein (357aa)
DNA integrity scanning protein DisA n=29 Tax=Clostridium difficile RepID=D5Q1S9_CLODI
DNA integrity scanning protein DisA
DNA integrity scanning protein DisA {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00010389}; Cyclic di-AMP synthase {ECO:0000256|HAMAP-Rule:MF_01438}; Diadenylate cyclase {ECO:0000256|HAMAP-Rule:MF_01438, ECO:0000256|SAAS:SAAS00207481}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L3_123_000G1_scaffold_620_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14357..15451
DNA (1095bp) protein (365aa)
PIN domain protein n=196 Tax=Clostridium difficile RepID=T2TRP8_CLODI
hypothetical protein
PIN domain protein {ECO:0000313|EMBL:EQG78977.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_123_000G1_scaffold_620_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15580..17757
DNA (2178bp) protein (726aa)
Putative membrane protein n=1 Tax=Clostridium difficile CD002 RepID=U3W136_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ32578.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
putative membrane protein
L3_123_000G1_scaffold_620_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17943..18788)
DNA (846bp) protein (282aa)
Transcriptional regulator, AraC family n=7 Tax=Clostridium difficile RepID=G6B355_CLODI
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EHJ32577.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
Transcriptional regulator, AraC family
L3_123_000G1_scaffold_620_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19004..20170
DNA (1167bp) protein (389aa)
Putative beta-glucosidase n=1 Tax=Clostridium difficile CD002 RepID=U3VZW9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ32576.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
beta-glucosidase
L3_123_000G1_scaffold_620_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20192..21838
DNA (1647bp) protein (549aa)
putative glycoside hydrolase (EC:3.2.1.-)
Xylan beta-1,4-xylosidase n=1 Tax=Clostridium difficile CD113 RepID=T4YNY5_CLODI
Glycosyl hydrolase, family 43 {ECO:0000313|EMBL:EHJ32575.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_620_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21935..23308
DNA (1374bp) protein (458aa)
Putative xylose transporter, sodium:galactoside symporter family n=1 Tax=Clostridium difficile CD002 RepID=U3W2B8_CLODI
Transporter, major facilitator family protein {ECO:0000313|EMBL:EHJ32574.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
xylose transporter
L3_123_000G1_scaffold_620_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23756..24709
DNA (954bp) protein (318aa)
Bacterial regulatory s, crp family protein n=190 Tax=Clostridium difficile RepID=C9XIE7_CLODC
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CCL32549.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_123_000G1_scaffold_620_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24747..25709
DNA (963bp) protein (321aa)
Acetoin:2,6-dichlorophenolindophenol oxidoreductase alpha subunit n=200 Tax=Clostridium difficile RepID=C9XIE8_CLODC
acoA; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit alpha
Thiamine pyrophosphate enzyme, C-terminal TPP binding domain protein {ECO:0000313|EMBL:EQE70952.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_123_000G1_scaffold_620_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25734..26720
DNA (987bp) protein (329aa)
TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit n=6 Tax=Clostridium difficile RepID=G6B349_CLODI
TPP-dependent acetoin dehydrogenase complex, E1 component, beta subunit {ECO:0000313|EMBL:EHJ34498.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
acoB; acetoin:2,6-dichlorophenolindophenol oxidoreductase subunit beta
L3_123_000G1_scaffold_620_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26733..27779
DNA (1047bp) protein (349aa)
acoC; Acetoin dehydrogenase E2 component(dihydrolipoamide acetyltransferase) (EC:2.3.1.12)
2-oxo acid dehydrogenase acyltransferase n=9 Tax=Clostridium difficile RepID=G6B348_CLODI
2-oxo acid dehydrogenase acyltransferase {ECO:0000313|EMBL:EHJ32570.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_620_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27946..29676
DNA (1731bp) protein (577aa)
Dihydrolipoyl dehydrogenase {ECO:0000256|RuleBase:RU003692}; EC=1.8.1.4 {ECO:0000256|RuleBase:RU003692};; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Acetoin dehydrogenase E3 component (Dihydrolipoamide dehydrogenase) n=1 Tax=Clostridium difficile CD002 RepID=U3W2C2_CLODI
acoL; E3 component of acetoin dehydrogenase enzyme system (dihydrolipoyl dehydrogenase)
L3_123_000G1_scaffold_620_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30092..33040
DNA (2949bp) protein (983aa)
Transcription antiterminator, PTS operon regulator n=1 Tax=Clostridium difficile CD002 RepID=U3W143_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ32568.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
transcription antiterminator
L3_123_000G1_scaffold_620_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33018..33482
DNA (465bp) protein (155aa)
PTS system, IIa component n=187 Tax=Clostridium difficile RepID=C9XIF3_CLODC
PTS system transporter subunit IIA
PTS system, galactitol-specific IIA component {ECO:0000313|EMBL:CCL32555.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_123_000G1_scaffold_620_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33563..33865
DNA (303bp) protein (101aa)
PTS system, IIb component n=6 Tax=Clostridium difficile RepID=C9XIF4_CLODC
PTS system transporter subunit IIB
PTS system, IIb component {ECO:0000313|EMBL:CBE01517.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_123_000G1_scaffold_620_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33942..35291
DNA (1350bp) protein (450aa)
PTS system, IIc component n=147 Tax=Clostridium difficile RepID=C9XIF5_CLODC
PTS system transporter subunit IIC
Galactitol-specific enzyme IIC component of PTS {ECO:0000313|EMBL:CDS88943.1}; PTS system transporter subunit IIC {ECO:0000313|EMBL:CKH92877.1}; PTS system, galactitol-specific IIC component {ECO:0000313|EMBL:CEJ96545.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_123_000G1_scaffold_620_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35326..35799
DNA (474bp) protein (158aa)
Uncharacterized protein n=10 Tax=Clostridium difficile RepID=G6B342_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ32564.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_620_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35971..36621
DNA (651bp) protein (217aa)
Class II Aldolase and Adducin N-terminal domain protein n=9 Tax=Clostridium difficile RepID=T3AI16_CLODI
Putative L-ribulose-5-phosphate 4-epimerase {ECO:0000313|EMBL:EHJ32563.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
putative sugar-phosphate aldolase
L3_123_000G1_scaffold_620_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36797..37729
DNA (933bp) protein (311aa)
Lipoyltransferase and lipoate-protein ligase n=8 Tax=Clostridium difficile RepID=G6B340_CLODI
Lipoyltransferase and lipoate-protein ligase {ECO:0000313|EMBL:EHJ34489.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
lipoate-protein ligase
Displaying items 1-30 of 43 in total

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