ggKbase home page

L3_123_000G1_scaffold_1767

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_000G1_scaffold_1767_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(124..429)
DNA (306bp) protein (102aa)
Uncharacterized protein n=6 Tax=Clostridium difficile RepID=G6B4V2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ33011.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_1767_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(626..1948)
DNA (1323bp) protein (441aa)
Uncharacterized protein n=12 Tax=Clostridium difficile RepID=G6B4V1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ33010.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_1767_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2305..3945)
DNA (1641bp) protein (547aa)
Amidohydrolase family protein n=7 Tax=Clostridium difficile RepID=G6B4V0_CLODI
Amidohydrolase family protein {ECO:0000313|EMBL:EHJ33009.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
amidohydrolase 3
L3_123_000G1_scaffold_1767_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4255..4911)
DNA (657bp) protein (219aa)
Uncharacterized protein n=113 Tax=Clostridium difficile RepID=G6B4U9_CLODI
Putative membrane protein {ECO:0000313|EMBL:EQE68967.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
hypothetical protein
L3_123_000G1_scaffold_1767_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4937..5638)
DNA (702bp) protein (234aa)
Uncharacterized protein n=7 Tax=Clostridium difficile RepID=G6B4U8_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ33007.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_1767_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6432..6935
DNA (504bp) protein (168aa)
Sigma-70 region 2 n=2 Tax=Clostridium difficile RepID=G6B4U7_CLODI
Sigma-70 region 2 {ECO:0000313|EMBL:EHJ31772.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
RNA polymerase sigma factor
L3_123_000G1_scaffold_1767_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6932..7711
DNA (780bp) protein (260aa)
Anti Sigma factors, ECF family n=1 Tax=Clostridium difficile CD002 RepID=U3VW67_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ31771.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
hypothetical protein
L3_123_000G1_scaffold_1767_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7919..8419)
DNA (501bp) protein (167aa)
Acetyltransferase, GNAT family n=12 Tax=Clostridium difficile RepID=G6B4U5_CLODI
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EHJ31770.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
acetyltransferase
L3_123_000G1_scaffold_1767_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8635..8913)
DNA (279bp) protein (93aa)
Uncharacterized protein n=3 Tax=Clostridium difficile RepID=U3VSQ6_CLODI
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ67507.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_123_000G1_scaffold_1767_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8995..9702)
DNA (708bp) protein (236aa)
Uncharacterized protein n=196 Tax=Clostridium difficile RepID=C9XKV9_CLODC
hypothetical protein
Putative methyltransferase {ECO:0000313|EMBL:CCL20781.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_123_000G1_scaffold_1767_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10434..11303)
DNA (870bp) protein (290aa)
Uncharacterized protein n=13 Tax=Clostridium difficile RepID=U3VR41_CLODI
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CKH63310.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
conserved hypothetical protein
L3_123_000G1_scaffold_1767_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11623..12147)
DNA (525bp) protein (175aa)
Glyoxalase family protein n=9 Tax=Clostridium difficile RepID=G6B4U1_CLODI
Glyoxalase family protein {ECO:0000313|EMBL:EHJ31766.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
glyoxalase
L3_123_000G1_scaffold_1767_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12838..13227)
DNA (390bp) protein (130aa)
Penicillinase repressor family protein n=209 Tax=Clostridium difficile RepID=C9XKV7_CLODC
regulatory protein
Penicillinase repressor family protein {ECO:0000313|EMBL:EQG77940.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_123_000G1_scaffold_1767_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14626..16032)
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
His Kinase A domain protein n=8 Tax=Clostridium difficile RepID=T3GID2_CLODI
two-component sensor histidine kinase
L3_123_000G1_scaffold_1767_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16077..16784)
DNA (708bp) protein (236aa)
Transcriptional regulatory family protein n=1 Tax=Clostridium difficile CD69 RepID=T3AAY4_CLODI
Response regulator receiver domain protein {ECO:0000313|EMBL:EHJ31834.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
two-component response regulator
L3_123_000G1_scaffold_1767_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16955..17869
DNA (915bp) protein (305aa)
cdd4; lantibiotic/multidrug family ABC transporter ATP-binding protein (EC:3.6.3.-)
ABC transporter family protein n=8 Tax=Clostridium difficile RepID=T3GDD7_CLODI
Putative bacitracin ABC transporter, ATP-binding protein BcrA {ECO:0000313|EMBL:EHJ31832.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_123_000G1_scaffold_1767_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17869..18630
DNA (762bp) protein (254aa)
Uncharacterized protein n=9 Tax=Clostridium difficile RepID=G6B4T5_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EHJ31831.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
cdd3; lantibiotic ABC transporter permease
L3_123_000G1_scaffold_1767_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18642..19379
DNA (738bp) protein (246aa)
ABC transporter lantibiotic/multidrug-family permease n=1 Tax=Clostridium difficile RepID=V5ZF22_CLODI
ABC transporter lantibiotic/multidrug-family permease {ECO:0000313|EMBL:CDF47184.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
cdd2; lantibiotic ABC transporter permease
L3_123_000G1_scaffold_1767_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19858..20316
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Clostridium difficile RepID=V5ZEK1_CLODI
Uncharacterized protein {ECO:0000313|EMBL:CDF47183.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
hypothetical protein
L3_123_000G1_scaffold_1767_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20489..20758
DNA (270bp) protein (90aa)
Uncharacterized protein n=195 Tax=Clostridium difficile RepID=T3I7P0_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE69325.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_123_000G1_scaffold_1767_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20976..21221)
DNA (246bp) protein (82aa)
Pathogenicity locus family protein n=159 Tax=Clostridium difficile RepID=C9XKV0_CLODC
d1; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EHJ32990.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
Displaying 21 items

View Taxonomy