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L3_123_031G1_scaffold_460

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Displaying 29 items
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*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_031G1_scaffold_460_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3..284
DNA (282bp) protein (94aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A5X4_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31858.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
putative transport protein
L3_123_031G1_scaffold_460_2
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(374..2131)
DNA (1758bp) protein (586aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGE8_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31859.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
ABC transporter ATP-binding protein
L3_123_031G1_scaffold_460_3
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2395..2880
DNA (486bp) protein (162aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YWQ3_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31860.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
flavodoxin
L3_123_031G1_scaffold_460_4
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3314..4144
DNA (831bp) protein (277aa)
1-(5-phosphoribosyl)-5-amino-4-imidazole-carboxylate (AIR) carboxylase n=2 Tax=Clostridium butyricum RepID=N9YW90_CLOBU
Ncair mutase {ECO:0000313|EMBL:ETI88093.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
NCAIR mutase (PurE)-related proteins
L3_123_031G1_scaffold_460_5
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4137..5444
DNA (1308bp) protein (436aa)
UPI0003D6070D related cluster n=1 Tax=unknown RepID=UPI0003D6070D
Uncharacterized protein {ECO:0000313|EMBL:KHD14670.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
hypothetical protein
L3_123_031G1_scaffold_460_6
Clostridium sp. IBUN22A, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5431..6255
DNA (825bp) protein (275aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K0T0_CLOBU
ATP-utilizing enzyme of the PP-loop superfamily {ECO:0000313|EMBL:KJZ87106.1}; TaxID=1523155 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN22A.;"
asparagine synthase
L3_123_031G1_scaffold_460_7
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6329..7330
DNA (1002bp) protein (334aa)
UPI0003D5F63E related cluster n=1 Tax=unknown RepID=UPI0003D5F63E
Cobalamin biosynthesis protein CbiM {ECO:0000313|EMBL:KHD14668.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
ABC-type Co2+ transport system, permease component
L3_123_031G1_scaffold_460_8
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7323..8123
DNA (801bp) protein (267aa)
UPI0003D5BC56 related cluster n=1 Tax=unknown RepID=UPI0003D5BC56
Cobalt ABC transporter permease {ECO:0000313|EMBL:KHD14667.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
cobalt ABC transporter, permease protein CbiQ
L3_123_031G1_scaffold_460_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8139..8864
DNA (726bp) protein (242aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YW95_CLOBU
Cobalt ABC transporter ATP-binding protein {ECO:0000313|EMBL:KHD14666.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
cbiO; cobalt ABC transporter ATP-binding protein
L3_123_031G1_scaffold_460_10
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8886..10004
DNA (1119bp) protein (373aa)
UPI0003D5B729 related cluster n=1 Tax=unknown RepID=UPI0003D5B729
Fe-S oxidoreductase {ECO:0000313|EMBL:KHD14665.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
oxidoreductase
L3_123_031G1_scaffold_460_11
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10433..11413
DNA (981bp) protein (327aa)
MviM protein n=2 Tax=Clostridium butyricum RepID=B1R0Z0_CLOBU
NAD(P)-dependent oxidoreductase {ECO:0000313|EMBL:KHD14664.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
MviM protein
L3_123_031G1_scaffold_460_12
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11403..12437
DNA (1035bp) protein (345aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AGF5_CLOBU
NAD(P)-dependent oxidoreductase {ECO:0000313|EMBL:KHD14663.1}; TaxID=1492 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum.;"
NAD(P)-dependent oxidoreductase
L3_123_031G1_scaffold_460_13
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12651..13271
DNA (621bp) protein (207aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
sodA; superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8J565_CLOBU
L3_123_031G1_scaffold_460_14
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13511..14326
DNA (816bp) protein (272aa)
yisY; AB hydrolase superfamily protein YisY (EC:3.-.-.-)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YW98_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ31871.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
L3_123_031G1_scaffold_460_15
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14728..15021
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AHC7_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32164.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_123_031G1_scaffold_460_16
Paenibacillus sp. FSL H7-0357, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

15121..17388
DNA (2268bp) protein (756aa)
SEC-C motif domain protein, putative n=1 Tax=Bacillus cereus H3081.97 RepID=B5V0C7_BACCE
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AIQ17513.1}; TaxID=1536774 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL H7-0357.;"
L3_123_031G1_scaffold_460_17
unknown

Not on your lists

17774..19018
DNA (1245bp) protein (415aa)

This feature has no annotations

L3_123_031G1_scaffold_460_18
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19586..21214)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5N0J8_CLOSA
Uncharacterized protein {ECO:0000313|EMBL:AGX45431.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
hypothetical protein
L3_123_031G1_scaffold_460_19
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21404..21754
DNA (351bp) protein (117aa)
Uncharacterized protein n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MXD6_CLOSA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGX45429.1}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_123_031G1_scaffold_460_20
Clostridium sp. IBUN125C, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22224..22610
DNA (387bp) protein (129aa)
DNA repair protein RadC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H205_9CLOT
DNA repair protein RadC {ECO:0000313|EMBL:KJZ86683.1}; TaxID=1523154 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. IBUN125C.;"
DNA repair protein RadC
L3_123_031G1_scaffold_460_21
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22720..23007
DNA (288bp) protein (96aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U3Q3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55886.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
L3_123_031G1_scaffold_460_22
Clostridium sp. Maddingley MBC34-26, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22962..23324
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6U3Q3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EKQ55886.1}; TaxID=1196322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. Maddingley MBC34-26.;"
hypothetical protein
L3_123_031G1_scaffold_460_23
Paenibacillus sp. FSL R5-192, Paenibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

23488..24150
DNA (663bp) protein (221aa)
hypothetical protein n=1 Tax=Clostridium botulinum RepID=UPI00037E1EF9
Uncharacterized protein {ECO:0000313|EMBL:ETT31659.1}; TaxID=1226754 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Paenibacillus.;" source="Paenibacillus sp. FSL R5-192.;"
L3_123_031G1_scaffold_460_24
Clostridium sp. CAG:288, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24324..24782
DNA (459bp) protein (153aa)
hypothetical protein n=1 Tax=Clostridium tunisiense RepID=UPI0003153CA6
Uncharacterized protein {ECO:0000313|EMBL:CDE15303.1}; TaxID=1262791 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:288.;"
L3_123_031G1_scaffold_460_25

Not on your lists

25083..25355
DNA (273bp) protein (91aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0A8T6_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ35929.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_123_031G1_scaffold_460_26

Not on your lists

25627..25812
DNA (186bp) protein (62aa)
UPI0003D5F3F3 related cluster n=1 Tax=unknown RepID=UPI0003D5F3F3
Uncharacterized protein {ECO:0000313|EMBL:ETJ35930.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_123_031G1_scaffold_460_27

Not on your lists

25916..26080
DNA (165bp) protein (55aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=R0AJ77_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ETJ35931.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_123_031G1_scaffold_460_28
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26082..26645
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum 60E.3 RepID=N9YZE1_CLOBU
Uncharacterized protein {ECO:0000313|EMBL:ENZ32835.1}; TaxID=997898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum 60E.3.;"
hypothetical protein
L3_123_031G1_scaffold_460_29
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26775..26966)
DNA (192bp) protein (64aa)
Putative transposase n=1 Tax=Clostridium butyricum DKU-01 RepID=M8K833_CLOBU
Putative transposase {ECO:0000313|EMBL:EEP56158.1}; TaxID=632245 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum E4 str. BoNT E BL5262.;"
transposase ISL3 family
Displaying 29 items

View Taxonomy