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L3_123_092G1_scaffold_581

Search features with annotation key words

Displaying 28 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_092G1_scaffold_581_1
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(103..1476)
DNA (1374bp) protein (458aa)
MATE efflux family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CXE8_BACPM
MATE efflux family protein {ECO:0000313|EMBL:EDY96083.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
putative efflux protein, MATE family
L3_123_092G1_scaffold_581_2
Bacteroides sp. CAG:661, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(1590..2567)
DNA (978bp) protein (326aa)
Filamentation induced by cAMP protein Fic n=1 Tax=Bacteroides sp. CAG:661 RepID=R5S6H4_9BACE
Filamentation induced by cAMP protein Fic {ECO:0000313|EMBL:CCZ48668.1}; TaxID=1262746 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:661.;"
filamentation induced by cAMP protein fic
L3_123_092G1_scaffold_581_3
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3140..3982
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VYP1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88686.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
flagellar motor protein MotB
L3_123_092G1_scaffold_581_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(4082..5683)
DNA (1602bp) protein (534aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZQ9_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY95940.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_581_5
Bacteroides dorei, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5691..6779)
DNA (1089bp) protein (363aa)
Uncharacterized protein n=1 Tax=Bacteroides dorei CL03T12C01 RepID=I9R819_9BACE
beta-lactamase
Uncharacterized protein {ECO:0000313|EMBL:EIY38646.1}; TaxID=997877 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides dorei CL03T12C01.;"
L3_123_092G1_scaffold_581_6
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6952..10077)
DNA (3126bp) protein (1042aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Beta galactosidase small chain n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZQ8_BACPM
beta-galactosidase/beta-glucuronidase
L3_123_092G1_scaffold_581_7
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(10157..11371)
DNA (1215bp) protein (405aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZQ7_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY95938.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
glycoside hydrolase
L3_123_092G1_scaffold_581_8
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(11501..12952)
DNA (1452bp) protein (484aa)
Bacterial group 2 Ig-like protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZQ6_BACPM
Bacterial group 2 Ig-like protein {ECO:0000313|EMBL:EDY95937.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Ig domain-containing protein group 2 domain-containing protein
L3_123_092G1_scaffold_581_9
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(12995..14716)
DNA (1722bp) protein (574aa)
SusD family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZQ5_BACPM
SusD family protein {ECO:0000313|EMBL:EDY95936.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_581_10
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14727..17789)
DNA (3063bp) protein (1021aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZQ4_BACPM
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDY95935.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_581_11
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17790..17939)
DNA (150bp) protein (50aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZQ4_BACPM
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDY95935.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
collagen-binding protein
L3_123_092G1_scaffold_581_12
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17983..18501)
DNA (519bp) protein (173aa)
RNA polymerase sigma-70 factor n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CZQ3_BACPM
RNA polymerase sigma-70 factor {ECO:0000313|EMBL:EDY95934.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
RNA polymerase sigma 70
L3_123_092G1_scaffold_581_13
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(18723..21632)
DNA (2910bp) protein (970aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W127_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86462.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
transcriptional regulator
L3_123_092G1_scaffold_581_14
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21903..24638)
DNA (2736bp) protein (912aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VSH1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86461.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_123_092G1_scaffold_581_15
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

24932..26677
DNA (1746bp) protein (582aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7V5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86460.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
SSS sodium solute transporter superfamily protein
L3_123_092G1_scaffold_581_16
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26708..26860
DNA (153bp) protein (51aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VEX0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86459.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_123_092G1_scaffold_581_17
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26857..28014
DNA (1158bp) protein (386aa)
Aldose 1-epimerase {ECO:0000256|PIRNR:PIRNR005096}; EC=5.1.3.3 {ECO:0000256|PIRNR:PIRNR005096};; Galactose mutarotase {ECO:0000256|PIRNR:PIRNR005096}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Aldose 1-epimerase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7A9_9BACE
aldose 1-epimerase
L3_123_092G1_scaffold_581_18
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28063..28740
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W123_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86457.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
NUDIX hydrolase
L3_123_092G1_scaffold_581_19
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

28745..29434
DNA (690bp) protein (230aa)
L-ribulose-5-phosphate 4-epimerase (EC:5.1.3.4)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VSG5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86456.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_123_092G1_scaffold_581_20
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

29477..31003
DNA (1527bp) protein (509aa)
L-arabinose isomerase {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909}; EC=5.3.1.4 {ECO:0000256|HAMAP-Rule:MF_00519, ECO:0000256|SAAS:SAAS00008909};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L-arabinose isomerase (EC:5.3.1.4)
L-arabinose isomerase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7U9_9BACE
L3_123_092G1_scaffold_581_21
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31112..32707
DNA (1596bp) protein (532aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VEW4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86454.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Sugar (pentulose and hexulose) kinases
L3_123_092G1_scaffold_581_22
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32797..34857
DNA (2061bp) protein (687aa)
formaldehyde transketolase (EC:2.2.1.3)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7A3_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86453.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_123_092G1_scaffold_581_23
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34857..35291
DNA (435bp) protein (145aa)
RpiB/LacA/LacB family sugar-phosphate isomerase (EC:5.3.1.6)
Ribose-5-phosphate isomerase B n=2 Tax=Bacteroides RepID=B5CZP2_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86452.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_123_092G1_scaffold_581_24
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

35519..36562
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VSF9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86451.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_123_092G1_scaffold_581_25
unknown

Not on your lists

comp(36568..36867)
DNA (300bp) protein (100aa)

This feature has no annotations

L3_123_092G1_scaffold_581_26
Bacteroides massiliensis, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(36987..37808)
DNA (822bp) protein (274aa)
Uncharacterized protein n=1 Tax=Bacteroides massiliensis dnLKV3 RepID=R9HYU9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EOS09178.1}; TaxID=1235788 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides massiliensis dnLKV3.;"
L3_123_092G1_scaffold_581_27
Bacteroides sp. 1_1_6, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(37789..38079)
DNA (291bp) protein (97aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. 1_1_6 RepID=C6IJX8_9BACE
Uncharacterized protein {ECO:0000313|EMBL:EES69610.1}; TaxID=469586 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 1_1_6.;"
L3_123_092G1_scaffold_581_28
Prevotella sp. CAG:891, Prevotella, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(38081..38593)
DNA (513bp) protein (171aa)
Uncharacterized protein n=1 Tax=Prevotella sp. CAG:891 RepID=R7LGM5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDE87161.1}; TaxID=1262937 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Prevotellaceae; Prevotella; environmental samples.;" source="Prevotella sp. CAG:891.;"
hypothetical protein
Displaying 28 items

View Taxonomy