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L3_123_092G1_scaffold_654

Search features with annotation key words

Displaying 30 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_092G1_scaffold_654_1
Bacteroides sp. 2_1_16, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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138..344
DNA (207bp) protein (69aa)
CRISPR-associated endoribonuclease Cas2 {ECO:0000256|HAMAP-Rule:MF_01471}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_01471};; TaxID=469587 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides sp. 2_1_16.;"
CRISPR-associated protein Cas2 n=1 Tax=Bacteroides faecis RepID=UPI000262F478
hypothetical protein
L3_123_092G1_scaffold_654_2
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(1889..3067)
DNA (1179bp) protein (393aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D328_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY93978.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_654_3
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(3078..4181)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D327_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY93977.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_654_4
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(4219..5829)
DNA (1611bp) protein (537aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D326_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY93976.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_654_5
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(5855..8941)
DNA (3087bp) protein (1029aa)
TonB-linked outer membrane protein, SusC/RagA family n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D325_BACPM
TonB-linked outer membrane protein, SusC/RagA family {ECO:0000313|EMBL:EDY93975.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_654_6
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

9863..13090
DNA (3228bp) protein (1076aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
UvrD/REP helicase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D323_BACPM
UvrD/REP helicase
L3_123_092G1_scaffold_654_7
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

13129..16002
DNA (2874bp) protein (958aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V7L2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86385.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_123_092G1_scaffold_654_8
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16223..17374)
DNA (1152bp) protein (384aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VEN6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86384.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_123_092G1_scaffold_654_9
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(17386..19398)
DNA (2013bp) protein (671aa)
1,4-alpha-glucan branching enzyme {ECO:0000256|SAAS:SAAS00046836}; EC=2.4.1.18 {ECO:0000256|SAAS:SAAS00046836};; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
1,4-alpha-glucan-branching protein (EC:2.4.1.18)
Uncharacterized protein n=2 Tax=Bacteroides RepID=R5V727_9BACE
L3_123_092G1_scaffold_654_10
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19417..19860)
DNA (444bp) protein (148aa)
YhcH/YjgK/YiaL family protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D318_BACPM
YhcH/YjgK/YiaL family protein {ECO:0000313|EMBL:EDY93968.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_654_11
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19889..20554)
DNA (666bp) protein (222aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VS73_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86381.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_123_092G1_scaffold_654_12
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20628..21407)
DNA (780bp) protein (260aa)
Inositol monophosphatase family protein n=2 Tax=Bacteroides RepID=B5D316_BACPM
Uncharacterized protein {ECO:0000313|EMBL:CCZ86380.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
inositol-1-monophosphatase
L3_123_092G1_scaffold_654_13
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21410..22567)
DNA (1158bp) protein (386aa)
MORN repeat protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D315_BACPM
MORN repeat protein {ECO:0000313|EMBL:EDY93965.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
MORN repeat-containing protein
L3_123_092G1_scaffold_654_14
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(22603..23895)
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V724_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ86378.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
peptidase M16 domain-containing protein
L3_123_092G1_scaffold_654_15
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23892..24653)
DNA (762bp) protein (254aa)
3-deoxy-manno-octulosonate cytidylyltransferase {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008}; EC=2.7.7.38 {ECO:0000256|HAMAP-Rule:MF_00057, ECO:0000256|SAAS:SAAS00089008};; CMP-2-keto-3-deoxyoctulosonic acid synthase {ECO:0000256|HAMAP-Rule:MF_00057}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
3-deoxy-manno-octulosonate cytidylyltransferase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W0T4_9BACE
3-deoxy-manno-octulosonate cytidylyltransferase
L3_123_092G1_scaffold_654_16
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(24722..25375)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Bacteroides sp. CAG:714 RepID=R6YRH0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDD34009.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
hypothetical protein
L3_123_092G1_scaffold_654_17
Bacteroides sp. CAG:714, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25372..26466)
DNA (1095bp) protein (365aa)
RecF/RecN/SMC protein n=2 Tax=environmental samples RepID=R5W650_9BACE
RecF/RecN/SMC protein {ECO:0000313|EMBL:CDD34010.1}; TaxID=1262749 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides sp. CAG:714.;"
ATPase-like protein
L3_123_092G1_scaffold_654_18
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(26849..27349)
DNA (501bp) protein (167aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D309_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY93959.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_654_19
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27359..27805)
DNA (447bp) protein (149aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D308_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY93958.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_654_20
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(27805..29178)
DNA (1374bp) protein (458aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VGV1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87104.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
NADP-dependent oxidoreductase domain
L3_123_092G1_scaffold_654_21
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29212..30729)
DNA (1518bp) protein (506aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V959_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87103.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
4Fe-4S ferredoxin
L3_123_092G1_scaffold_654_22
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

30992..32485
DNA (1494bp) protein (498aa)
Succinate CoA transferase {ECO:0000313|EMBL:EDY93955.1}; EC=2.8.3.- {ECO:0000313|EMBL:EDY93955.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
succinate CoA transferase (EC:3.1.2.1)
Succinate CoA transferase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D305_BACPM
L3_123_092G1_scaffold_654_23
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

32488..33402
DNA (915bp) protein (305aa)
Ribonuclease Z {ECO:0000256|HAMAP-Rule:MF_01818}; Short=RNase Z {ECO:0000256|HAMAP-Rule:MF_01818};; EC=3.1.26.11 {ECO:0000256|HAMAP-Rule:MF_01818};; tRNA 3 endonuclease {ECO:0000256|HAMAP-Rule:MF_01818}; tRNase Z {ECO:0000256|HAMAP-Rule:MF_01818}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Ribonuclease Z n=2 Tax=Bacteroides RepID=R5VU87_9BACE
Ribonuclease Z
L3_123_092G1_scaffold_654_24
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

33515..34033
DNA (519bp) protein (173aa)
Sigma-70 region 2 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D302_BACPM
Sigma-70 region 2 {ECO:0000313|EMBL:EDY93952.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
RNA polymerase sigma70 factor
L3_123_092G1_scaffold_654_25
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34079..34462
DNA (384bp) protein (128aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5D301_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY93951.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_654_26
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

34470..34928
DNA (459bp) protein (153aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5V955_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ87098.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_123_092G1_scaffold_654_27
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(35194..36093)
DNA (900bp) protein (300aa)
Uncharacterized protein n=1 Tax=Bacteroides salyersiae WAL 10018 = DSM 18765 = JCM 12988 RepID=R0JJ71_9BACE
Transcriptional regulator AraC family domain protein {ECO:0000313|EMBL:CDB71693.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
DNA-binding domain-containing protein
L3_123_092G1_scaffold_654_28
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

36230..37009
DNA (780bp) protein (260aa)
Uncharacterized protein n=3 Tax=Bacteroides RepID=C9KZY7_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CDB71694.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
Zn-dependent hydrolase
L3_123_092G1_scaffold_654_29
Bacteroides cellulosilyticus CAG:158, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37043..37507
DNA (465bp) protein (155aa)
Cupin domain protein n=4 Tax=Bacteroides RepID=C9KZY6_9BACE
Putative cupin domain protein {ECO:0000313|EMBL:CDB71695.1}; TaxID=1263038 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides cellulosilyticus CAG:158.;"
cupin
L3_123_092G1_scaffold_654_30
Bacteroides finegoldii, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37531..38199
DNA (669bp) protein (223aa)
Radical SAM domain protein n=3 Tax=Bacteroides RepID=C9KZY5_9BACE
Radical SAM domain protein {ECO:0000313|EMBL:EEX44327.1}; TaxID=483215 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides finegoldii DSM 17565.;"
radical SAM protein
Displaying 30 items

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