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L3_123_092G1_scaffold_838

Search features with annotation key words

Displaying 25 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_123_092G1_scaffold_838_1
unknown

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comp(2..217)
DNA (216bp) protein (72aa)

This feature has no annotations

L3_123_092G1_scaffold_838_2
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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317..3559
DNA (3243bp) protein (1081aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VCF1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88303.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
peptidase S41
L3_123_092G1_scaffold_838_3
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(3883..5175)
DNA (1293bp) protein (431aa)
Tyrosine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716}; EC=6.1.1.1 {ECO:0000256|HAMAP-Rule:MF_02006, ECO:0000256|SAAS:SAAS00105716};; Tyrosyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02006}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
tyrosyl-tRNA synthetase (EC:6.1.1.1)
Tyrosine--tRNA ligase n=2 Tax=Bacteroides RepID=B5CUA7_BACPM
L3_123_092G1_scaffold_838_4
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(5255..5911)
DNA (657bp) protein (219aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VXL9_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88301.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
TatD-related deoxyribonuclease
L3_123_092G1_scaffold_838_5
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6144..6539)
DNA (396bp) protein (132aa)
Ribonuclease P protein component {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143752}; Short=RNase P protein {ECO:0000256|HAMAP-Rule:MF_00227};; Short=RNaseP protein {ECO:0000256|HAMAP-Rule:MF_00227};; EC=3.1.26.5 {ECO:0000256|HAMAP-Rule:MF_00227, ECO:0000256|SAAS:SAAS00143815};; Protein C5 {ECO:0000256|HAMAP-Rule:MF_00227}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Ribonuclease P protein component n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VD59_9BACE
Ribonuclease P protein component
L3_123_092G1_scaffold_838_6
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6614..7360)
DNA (747bp) protein (249aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VKE4_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88299.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
uroporphyrinogen-III synthase
L3_123_092G1_scaffold_838_7
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7366..8175)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VCE6_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88298.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
membrane protein
L3_123_092G1_scaffold_838_8
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8172..8759)
DNA (588bp) protein (196aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W6N2_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88297.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
lysine decarboxylase
L3_123_092G1_scaffold_838_9
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(8974..10269)
DNA (1296bp) protein (432aa)
S-adenosylmethionine synthase {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541}; Short=AdoMet synthase {ECO:0000256|HAMAP-Rule:MF_00086};; EC=2.5.1.6 {ECO:0000256|HAMAP-Rule:MF_00086, ECO:0000256|RuleBase:RU000541};; MAT {ECO:0000256|HAMAP-Rule:MF_00086}; Methionine adenosyltransferase {ECO:0000256|HAMAP-Rule:MF_00086}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
S-adenosylmethionine synthase (EC:2.5.1.6)
S-adenosylmethionine synthase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VXL4_9BACE
L3_123_092G1_scaffold_838_10
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10500..10958)
DNA (459bp) protein (153aa)
2-amino-4-hydroxy-6-hydroxymethyldihydropteridine pyrophosphokinase (EC:2.7.6.3)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VD54_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88295.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_123_092G1_scaffold_838_11
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10970..12025)
DNA (1056bp) protein (352aa)
S-adenosylmethionine:tRNA ribosyltransferase-isomerase {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094456}; EC=2.4.99.17 {ECO:0000256|HAMAP-Rule:MF_00113, ECO:0000256|SAAS:SAAS00094434};; Queuosine biosynthesis protein QueA {ECO:0000256|HAMAP-Rule:MF_00113}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
S-adenosylmethionine:tRNA ribosyltransferase-isomerase n=2 Tax=Bacteroides RepID=B5CU98_BACPM
S-adenosylmethionine--tRNA ribosyltransferase-isomerase
L3_123_092G1_scaffold_838_12
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12043..12747)
DNA (705bp) protein (235aa)
tRNA pseudouridine synthase B {ECO:0000256|HAMAP-Rule:MF_01080}; EC=5.4.99.25 {ECO:0000256|HAMAP-Rule:MF_01080};; tRNA pseudouridine(55) synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA pseudouridylate synthase {ECO:0000256|HAMAP-Rule:MF_01080}; tRNA-uridine isomerase {ECO:0000256|HAMAP-Rule:MF_01080}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
tRNA pseudouridine synthase B (EC:4.2.1.70)
tRNA pseudouridine synthase B n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CU97_BACPM
L3_123_092G1_scaffold_838_13
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12747..13604)
DNA (858bp) protein (286aa)
Undecaprenyl-diphosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; EC=3.6.1.27 {ECO:0000256|HAMAP-Rule:MF_01006};; Bacitracin resistance protein {ECO:0000256|HAMAP-Rule:MF_01006}; Undecaprenyl pyrophosphate phosphatase {ECO:0000256|HAMAP-Rule:MF_01006}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Undecaprenyl-diphosphatase n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W6M8_9BACE
undecaprenyl-diphosphatase
L3_123_092G1_scaffold_838_14
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13604..13861)
DNA (258bp) protein (86aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VXK5_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88291.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
hypothetical protein
L3_123_092G1_scaffold_838_15
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(13890..14759)
DNA (870bp) protein (290aa)
Cell division protein FtsX n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VD48_9BACE
Cell division protein FtsX {ECO:0000256|PIRNR:PIRNR003097}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
cell division protein FtsX
L3_123_092G1_scaffold_838_16
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14766..15662)
DNA (897bp) protein (299aa)
Methyltransferase type 12 n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VKD5_9BACE
Methyltransferase type 12 {ECO:0000313|EMBL:CCZ88289.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
type 12 methyltransferase
L3_123_092G1_scaffold_838_17
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

15837..15995
DNA (159bp) protein (53aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VCE1_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88288.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
Putative stress-responsive transcriptional regulator
L3_123_092G1_scaffold_838_18
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16206..17579)
DNA (1374bp) protein (458aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5W6M3_9BACE
(dimethylallyl)adenosine tRNA methylthiotransferase MiaB
L3_123_092G1_scaffold_838_19
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

17702..18049
DNA (348bp) protein (116aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VXK0_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88286.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_123_092G1_scaffold_838_20
Bacteroides plebeius CAG:211, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

18093..19589
DNA (1497bp) protein (499aa)
succinate CoA transferase (EC:3.1.2.1)
Uncharacterized protein n=1 Tax=Bacteroides plebeius CAG:211 RepID=R5VD45_9BACE
Uncharacterized protein {ECO:0000313|EMBL:CCZ88285.1}; TaxID=1263052 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides; environmental samples.;" source="Bacteroides plebeius CAG:211.;"
L3_123_092G1_scaffold_838_21
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19667..21817)
DNA (2151bp) protein (717aa)
Glycosyl hydrolase, family 88 {ECO:0000313|EMBL:EDY97466.1}; EC=3.2.1.- {ECO:0000313|EMBL:EDY97466.1};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Glycosyl hydrolase, family 88 n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CU88_BACPM
glycosyl hydrolase family protein
L3_123_092G1_scaffold_838_22
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(21848..23785)
DNA (1938bp) protein (646aa)
FG-GAP repeat protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CU87_BACPM
FG-GAP repeat protein {ECO:0000313|EMBL:EDY97465.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
FG-GAP repeat-containing protein
L3_123_092G1_scaffold_838_23
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(23802..25241)
DNA (1440bp) protein (480aa)
Polygalacturonase (Pectinase) n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CU86_BACPM
Polygalacturonase (Pectinase) {ECO:0000313|EMBL:EDY97464.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
glycoside hydrolase
L3_123_092G1_scaffold_838_24
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25238..25861)
DNA (624bp) protein (208aa)
Uncharacterized protein n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CU85_BACPM
Uncharacterized protein {ECO:0000313|EMBL:EDY97463.1}; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
hypothetical protein
L3_123_092G1_scaffold_838_25
Bacteroides plebeius, Bacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

26052..28124
DNA (2073bp) protein (691aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=484018 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Bacteroidaceae; Bacteroides.;" source="Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2).;"
Beta-galactosidase n=1 Tax=Bacteroides plebeius (strain DSM 17135 / JCM 12973 / M2) RepID=B5CU84_BACPM
beta-galactosidase
Displaying 25 items

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