ggKbase home page

L3_128_000G1_scaffold_19896

Search features with annotation key words

Displaying 11 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_19896_1
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(205..474)
DNA (270bp) protein (90aa)
Sugar (And other) transporter n=10 Tax=root RepID=D6D9X1_BIFLN
xylT; xylt
Sugar (And other) transporter {ECO:0000313|EMBL:CBK70974.1}; TaxID=722911 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum F8.;"
L3_128_000G1_scaffold_19896_2
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1161..1865
DNA (705bp) protein (235aa)
MalE-type ABC sugar transport system periplasmic component n=14 Tax=root RepID=B3DTI5_BIFLD
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
Solute binding protein of ABC transporter system {ECO:0000313|EMBL:AAN24104.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_128_000G1_scaffold_19896_3
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

1835..2155
DNA (321bp) protein (107aa)
Bacterial extracellular solute-binding family protein n=1 Tax=Bifidobacterium longum subsp. longum CECT 7347 RepID=T2I1S7_BIFLN
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
ABC transporter, solute-binding protein {ECO:0000313|EMBL:EIJ21594.1}; TaxID=1161904 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum 35B.;"
L3_128_000G1_scaffold_19896_4
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

2389..3336
DNA (948bp) protein (316aa)
MalF-type ABC sugar transport systems permease component n=13 Tax=root RepID=B3DTI4_BIFLD
ABC transporter permease
ABC transporter permease {ECO:0000313|EMBL:AIW43367.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_128_000G1_scaffold_19896_5
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3372..3674
DNA (303bp) protein (101aa)
MalG-type ABC sugar transport system permease component n=10 Tax=Bifidobacterium RepID=B3DTI3_BIFLD
malg-type abc sugar transport system permease component
Sugar transport system permease protein {ECO:0000313|EMBL:AAN24102.1}; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
L3_128_000G1_scaffold_19896_6
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

3685..4206
DNA (522bp) protein (174aa)
MalG-type ABC sugar transport system permease component n=10 Tax=Bifidobacterium RepID=B3DTI3_BIFLD
carbohydrate ABC transporter membrane protein 2, CUT1 family (TC 3.A.1.1.-)
ABC transporter permease {ECO:0000313|EMBL:AIW43368.1}; TaxID=1300227 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum GT15.;"
L3_128_000G1_scaffold_19896_7
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

4393..5118
DNA (726bp) protein (242aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=759350 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. longum (strain JDM301).;"
Beta-galactosidase n=2 Tax=Bifidobacterium longum subsp. longum RepID=I3AR42_BIFLN
beta-galactosidase
L3_128_000G1_scaffold_19896_8
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

5091..6434
DNA (1344bp) protein (448aa)
Beta-galactosidase {ECO:0000256|PIRNR:PIRNR001084}; Short=Beta-gal {ECO:0000256|PIRNR:PIRNR001084};; EC=3.2.1.23 {ECO:0000256|PIRNR:PIRNR001084};; TaxID=565040 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. infantis (strain 157F).;"
Beta-galactosidase n=6 Tax=root RepID=D6D9W7_BIFLN
beta-galactosidase
L3_128_000G1_scaffold_19896_9
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

6478..7440
DNA (963bp) protein (321aa)
Transcriptional regulator, LacI family n=3 Tax=Bifidobacterium RepID=D6D9W6_BIFLN
transcriptional regulator, LacI family
Transcriptional regulator, LacI family {ECO:0000313|EMBL:KFI72089.1}; TaxID=1695 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum subsp. suis.;"
L3_128_000G1_scaffold_19896_10
Bifidobacterium longum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

7512..8804
DNA (1293bp) protein (431aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=206672 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium longum (strain NCC 2705).;"
Arabinogalactan endo-1,4-beta-galactosidase n=2 Tax=Bifidobacterium longum RepID=B3DTI0_BIFLD
arabinogalactan endo-beta-galactosidase or galactanase
L3_128_000G1_scaffold_19896_11
Bifidobacterium longum CAG:69, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

8755..10026
DNA (1272bp) protein (424aa)
Arabinogalactan endo-beta-1,4-galactanase {ECO:0000256|RuleBase:RU361192}; EC=3.2.1.89 {ECO:0000256|RuleBase:RU361192};; TaxID=1263059 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium; environmental samples.;" source="Bifidobacterium longum CAG:69.;"
Possible arabinogalactan endo-beta-galactosidase or galactanase n=1 Tax=Bifidobacterium longum CAG:69 RepID=R5MUT3_9BIFI
arabinogalactan endo-beta-galactosidase
Displaying 11 items

View Taxonomy