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L3_128_000G1_scaffold_9945

Search features with annotation key words

Displaying 21 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_9945_1
Bacillus cereus, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(3..257)
DNA (255bp) protein (85aa)
Isochorismatase hydrolase n=2 Tax=Bacillus cereus group RepID=C2TFT1_BACCE
isochorismatase family protein
Isochorismatase hydrolase {ECO:0000313|EMBL:EEL17368.1}; TaxID=526979 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus; Bacillus cereus group.;" source="Bacillus cereus 95/8201.;"
L3_128_000G1_scaffold_9945_2
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(398..976)
DNA (579bp) protein (193aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX98_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13652.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_000G1_scaffold_9945_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(996..1910)
DNA (915bp) protein (305aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BX99_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13676.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_000G1_scaffold_9945_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1990..2235)
DNA (246bp) protein (82aa)
Cassette chromosome recombinase B n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXA0_CLOPF
Cassette chromosome recombinase B {ECO:0000313|EMBL:EDT13672.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_128_000G1_scaffold_9945_5
Clostridium sulfidigenes, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2282..3058)
DNA (777bp) protein (259aa)
Cassette chromosome recombinase B n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXA0_CLOPF
Resolvase {ECO:0000313|EMBL:KEZ85253.1}; TaxID=318464 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sulfidigenes.;"
DNA recombinase
L3_128_000G1_scaffold_9945_6
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3060..3791)
DNA (732bp) protein (244aa)
Cassette chromosome recombinase B n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BER7_CLOPF
Cassette chromosome recombinase B {ECO:0000313|EMBL:EDS81686.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
site-specific DNA recombinase
L3_128_000G1_scaffold_9945_7
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3843..3986)
DNA (144bp) protein (48aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BER9_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81689.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_000G1_scaffold_9945_8
unknown

Not on your lists

comp(4058..4156)
DNA (99bp) protein (33aa)

This feature has no annotations

L3_128_000G1_scaffold_9945_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4174..4689)
DNA (516bp) protein (172aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81697.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_128_000G1_scaffold_9945_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4949..6340)
DNA (1392bp) protein (464aa)
D5 N like family n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES1_CLOPF
D5 N like family {ECO:0000313|EMBL:EDS81721.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
P4 family phage/plasmid primase
L3_128_000G1_scaffold_9945_11
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6737..7597)
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES2_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81713.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_000G1_scaffold_9945_12
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7622..7924)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81677.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_000G1_scaffold_9945_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8020..8283)
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81708.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
Mor transcription activator family.
L3_128_000G1_scaffold_9945_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9049..9264)
DNA (216bp) protein (72aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXA7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13668.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_000G1_scaffold_9945_15
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9276..9581)
DNA (306bp) protein (102aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BXA8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT13660.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_128_000G1_scaffold_9945_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9639..9941)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES7_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81722.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_128_000G1_scaffold_9945_17
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9959..10288)
DNA (330bp) protein (110aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BES8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81692.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
hypothetical protein
L3_128_000G1_scaffold_9945_18
Clostridium septicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10518..10796)
DNA (279bp) protein (93aa)
TetA408(P) n=1 Tax=Clostridium septicum RepID=Q8VW96_CLOSE
TetA408(P) {ECO:0000313|EMBL:BAB71967.1}; TaxID=1504 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium septicum.;"
MDR-type permease, probably tetracycline resistance protein
L3_128_000G1_scaffold_9945_19
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10801..11592)
DNA (792bp) protein (264aa)
TetA408 n=2 Tax=Clostridium perfringens RepID=B1BES9_CLOPF
TetA408 {ECO:0000313|EMBL:EDS81682.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
major facilitator superfamily
L3_128_000G1_scaffold_9945_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11585..11716)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Clostridium perfringens RepID=G5DSR0_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:AEP95101.1}; TaxID=1502 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens.;"
hypothetical protein
L3_128_000G1_scaffold_9945_21
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12284..12763)
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000255|HAMAP-Rule:MF_00658}; EC=2.1.1.177 {ECO:0000255|HAMAP-Rule:MF_00658};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000255|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000255|HAMAP-Rule:MF_00658}; TaxID=195103 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens (strain ATCC 13124 / DSM 756 / JCM 1290 /; NCIMB 6125 / NCTC 8237 / Type A).;"
Ribosomal RNA large subunit methyltransferase H 1 n=8 Tax=Clostridium perfringens RepID=RLMH1_CLOPS
rRNA large subunit methyltransferase
Displaying 21 items

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