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L3_128_000G1_scaffold_2492

Search features with annotation key words

Displaying items 1-30 of 76 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_2492_1
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..852
DNA (852bp) protein (284aa)
Exodeoxyribonuclease 7 large subunit {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195504}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00378, ECO:0000256|SAAS:SAAS00195506};; Exodeoxyribonuclease VII large subunit {ECO:0000256|HAMAP-Rule:MF_00378}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
Exodeoxyribonuclease 7 large subunit n=2 Tax=Clostridium butyricum RepID=R0AQA8_CLOBU
xseA; exodeoxyribonuclease VII large subunit
L3_128_000G1_scaffold_2492_2
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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855..1076
DNA (222bp) protein (74aa)
exodeoxyribonuclease VII small subunit (EC:3.1.11.6)
Exodeoxyribonuclease 7 small subunit {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198685}; EC=3.1.11.6 {ECO:0000256|HAMAP-Rule:MF_00337, ECO:0000256|SAAS:SAAS00198686};; Exodeoxyribonuclease VII small subunit {ECO:0000256|HAMAP-Rule:MF_00337}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Exodeoxyribonuclease 7 small subunit n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW36_CLOSA
L3_128_000G1_scaffold_2492_3
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1063..1935
DNA (873bp) protein (291aa)
ispA; farnesyl diphosphate synthase IspA (EC:2.5.1.10)
Farnesyl diphosphate synthase IspA {ECO:0000313|EMBL:AGX43656.1}; EC=2.5.1.10 {ECO:0000313|EMBL:AGX43656.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Farnesyl diphosphate synthase IspA n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVI6_CLOSA
L3_128_000G1_scaffold_2492_4
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1952..3805
DNA (1854bp) protein (618aa)
1-deoxy-D-xylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897}; EC=2.2.1.7 {ECO:0000256|HAMAP-Rule:MF_00315, ECO:0000256|SAAS:SAAS00085897};; 1-deoxyxylulose-5-phosphate synthase {ECO:0000256|HAMAP-Rule:MF_00315}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
1-deoxy-D-xylulose-5-phosphate synthase n=1 Tax=Clostridium sp. DL-VIII RepID=G7M123_9CLOT
1-deoxy-D-xylulose-5-phosphate synthase
L3_128_000G1_scaffold_2492_5
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3817..4626
DNA (810bp) protein (270aa)
yqxC; putative rRNA methyltransferase YqxC (EC:2.1.1.-)
Putative rRNA methyltransferase YqxC {ECO:0000313|EMBL:AGX43654.1}; EC=2.1.1.- {ECO:0000313|EMBL:AGX43654.1};; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Putative rRNA methyltransferase YqxC n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MS71_CLOSA
L3_128_000G1_scaffold_2492_6
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4643..5497
DNA (855bp) protein (285aa)
ppnK; inorganic polyphosphate/ATP-NAD kinase PpnK (EC:2.7.1.23)
NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037468}; EC=2.7.1.23 {ECO:0000256|HAMAP-Rule:MF_00361, ECO:0000256|SAAS:SAAS00037533};; ATP-dependent NAD kinase {ECO:0000256|HAMAP-Rule:MF_00361}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
Probable inorganic polyphosphate/ATP-NAD kinase n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MSZ4_CLOSA
L3_128_000G1_scaffold_2492_7
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5494..5946
DNA (453bp) protein (151aa)
Arginine repressor n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MW31_CLOSA
argR; arginine repressor
Arginine repressor {ECO:0000256|HAMAP-Rule:MF_00173}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_128_000G1_scaffold_2492_8
Clostridium saccharobutylicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5965..7656
DNA (1692bp) protein (564aa)
DNA repair protein RecN n=1 Tax=Clostridium saccharobutylicum DSM 13864 RepID=U5MVI1_CLOSA
recN; DNA repair protein RecN
DNA repair protein RecN {ECO:0000256|PIRNR:PIRNR003128}; Recombination protein N {ECO:0000256|PIRNR:PIRNR003128}; TaxID=1345695 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharobutylicum DSM 13864.;"
L3_128_000G1_scaffold_2492_9
Clostridium butyricum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7815..9050
DNA (1236bp) protein (412aa)
UPI0003D62DC2 related cluster n=1 Tax=unknown RepID=UPI0003D62DC2
Stage IV sporulation protein B {ECO:0000313|EMBL:ETI87773.1}; TaxID=1403941 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium butyricum DORA_1.;"
peptidase S55, sporulation stage IV, protein B
L3_128_000G1_scaffold_2492_10
unknown

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9207..9332
DNA (126bp) protein (42aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_11
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9465..9701
DNA (237bp) protein (79aa)
Chemotaxis protein CheY n=1 Tax=Clostridium pasteurianum NRRL B-598 RepID=V8G0C8_CLOPA
response regulator receiver protein
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
L3_128_000G1_scaffold_2492_12
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9646..10281
DNA (636bp) protein (212aa)
Response regulator receiver protein n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=J7FTL3_9CLOT
spo0A; stage 0 sporulation protein A
Stage 0 sporulation protein A homolog {ECO:0000256|PIRNR:PIRNR002937}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_128_000G1_scaffold_2492_13
Clostridium sp. DL-VIII, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10436..11446
DNA (1011bp) protein (337aa)
Integrase family protein n=1 Tax=Clostridium sp. DL-VIII RepID=G7M130_9CLOT
Integrase family protein {ECO:0000313|EMBL:EHI99754.1}; TaxID=641107 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. DL-VIII.;"
DNA integration/recombination protein
L3_128_000G1_scaffold_2492_14
unknown

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11652..11801
DNA (150bp) protein (50aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_15
unknown

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11993..12307
DNA (315bp) protein (105aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_16
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12249..12410)
DNA (162bp) protein (54aa)
Uncharacterized protein n=2 Tax=Clostridium botulinum B RepID=B2TQ69_CLOBB
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ACD24600.1}; TaxID=935198 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum (strain Eklund 17B / Type B).;"
L3_128_000G1_scaffold_2492_17
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12577..13293
DNA (717bp) protein (239aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXR1_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES49095.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
hypothetical protein
L3_128_000G1_scaffold_2492_18
unknown

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13300..13497
DNA (198bp) protein (66aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_19
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13588..13749
DNA (162bp) protein (54aa)
Putative uncharacterized protein n=1 Tax=Clostridium botulinum E1 str. 'BoNT E Beluga' RepID=C5UXR0_CLOBO
Uncharacterized protein {ECO:0000313|EMBL:EES50085.1}; TaxID=536233 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum E1 str. 'BoNT E Beluga'.;"
L3_128_000G1_scaffold_2492_20
unknown

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13778..13999
DNA (222bp) protein (74aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_21
unknown

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14012..14890
DNA (879bp) protein (293aa)
Uncharacterized protein n=1 Tax=Clostridium butyricum DKU-01 RepID=M8JLP7_CLOBU
L3_128_000G1_scaffold_2492_22
Clostridium carboxidivorans, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14966..15205
DNA (240bp) protein (80aa)
Uncharacterized protein n=1 Tax=Clostridium carboxidivorans P7 RepID=C6PXS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EET85953.1}; TaxID=536227 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium carboxidivorans P7.;"
hypothetical protein
L3_128_000G1_scaffold_2492_23
unknown

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16596..16802
DNA (207bp) protein (69aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_24
unknown

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16996..18180
DNA (1185bp) protein (395aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_25
unknown

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18603..19190
DNA (588bp) protein (196aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_26
Eubacterium plexicaudatum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19529..20176
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Eubacterium plexicaudatum ASF492 RepID=N2A5M4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMZ21385.1}; TaxID=1235802 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium plexicaudatum ASF492.;"
hypothetical protein
L3_128_000G1_scaffold_2492_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20190..22676
DNA (2487bp) protein (829aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens C str. JGS1495 RepID=B1BKQ4_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79619.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
yonO; hypothetical protein
L3_128_000G1_scaffold_2492_28
unknown

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23205..23480
DNA (276bp) protein (92aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_29
unknown

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23503..24147
DNA (645bp) protein (215aa)

This feature has no annotations

L3_128_000G1_scaffold_2492_30
unknown

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24264..24410
DNA (147bp) protein (49aa)

This feature has no annotations

Displaying items 1-30 of 76 in total

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