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L3_128_000G1_scaffold_45

Search features with annotation key words

Displaying items 1-30 of 163 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_45_1
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2..148)
DNA (147bp) protein (49aa)
UPF0597 protein BN719_02424 n=1 Tax=Clostridium sp. CAG:58 RepID=R6STQ3_9CLOT
UPF0597 protein BN719_02424 {ECO:0000256|HAMAP-Rule:MF_01845}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
protein of unknown function DUF1063
L3_128_000G1_scaffold_45_2
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(162..1343)
DNA (1182bp) protein (394aa)
Aminotransferase classes I and II n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3S5_9CLOT
Aminotransferase classes I and II {ECO:0000313|EMBL:CDC49961.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
class I/II aminotransferase
L3_128_000G1_scaffold_45_3
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1551..2393
DNA (843bp) protein (281aa)
D-stereospecific aminopeptidase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQK7_9CLOT
D-stereospecific aminopeptidase {ECO:0000313|EMBL:CDC49960.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
D-aminopeptidase family protein
L3_128_000G1_scaffold_45_4
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2488..3084
DNA (597bp) protein (199aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX65_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDC49959.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
MerR family transcriptional regulator
L3_128_000G1_scaffold_45_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3098..4096
DNA (999bp) protein (333aa)
Renal dipeptidase family protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RM24_9CLOT
Renal dipeptidase family protein {ECO:0000313|EMBL:CDC49958.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Zn-dependent dipeptidase, microsomal dipeptidase
L3_128_000G1_scaffold_45_6
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4119..5660
DNA (1542bp) protein (514aa)
Beta-lactamase n=1 Tax=Clostridium sp. CAG:58 RepID=R6STP4_9CLOT
Beta-lactamase {ECO:0000313|EMBL:CDC49957.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
penicillin-binding protein
L3_128_000G1_scaffold_45_7
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5657..6598)
DNA (942bp) protein (314aa)
Predicted permeases n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3R9_9CLOT
Predicted permeases {ECO:0000313|EMBL:CDC49956.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Predicted permeases
L3_128_000G1_scaffold_45_8
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6629..7072)
DNA (444bp) protein (148aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQK2_9CLOT
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CDC49955.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_45_9
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7082..7903)
DNA (822bp) protein (274aa)
Glutamate racemase {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00031911}; EC=5.1.1.3 {ECO:0000256|HAMAP-Rule:MF_00258, ECO:0000256|SAAS:SAAS00041166};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
glutamate racemase (EC:5.1.1.3)
Glutamate racemase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX59_9CLOT
L3_128_000G1_scaffold_45_10
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7913..8977)
DNA (1065bp) protein (355aa)
D-alanine--D-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732}; EC=6.3.2.4 {ECO:0000256|HAMAP-Rule:MF_00047, ECO:0000256|SAAS:SAAS00232732};; D-Ala-D-Ala ligase {ECO:0000256|HAMAP-Rule:MF_00047}; D-alanylalanine synthetase {ECO:0000256|HAMAP-Rule:MF_00047}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
D-alanine--D-alanine ligase (EC:6.3.2.4)
D-alanine--D-alanine ligase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RM19_9CLOT
L3_128_000G1_scaffold_45_11
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9147..9893
DNA (747bp) protein (249aa)
Stage II sporulation protein R n=1 Tax=Clostridium sp. CAG:58 RepID=R6STN8_9CLOT
Stage II sporulation protein R {ECO:0000313|EMBL:CDC49952.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
stage II sporulation protein R
L3_128_000G1_scaffold_45_12
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9890..11125)
DNA (1236bp) protein (412aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX52_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49949.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_45_13
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11157..12413)
DNA (1257bp) protein (419aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RM15_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49948.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_45_14
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12532..15570)
DNA (3039bp) protein (1013aa)
Cation/multidrug efflux pump n=1 Tax=Clostridium sp. CAG:58 RepID=R6STN3_9CLOT
Cation/multidrug efflux pump {ECO:0000313|EMBL:CDC49947.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Cation/multidrug efflux pump
L3_128_000G1_scaffold_45_15
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15583..16827)
DNA (1245bp) protein (415aa)
RND family efflux transporter MFP subunit n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3Q6_9CLOT
RND family efflux transporter MFP subunit {ECO:0000313|EMBL:CDC49946.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
RND family efflux transporter, MFP subunit
L3_128_000G1_scaffold_45_16
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16848..17498)
DNA (651bp) protein (217aa)
Transcriptional regulator n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQI8_9CLOT
Transcriptional regulator {ECO:0000313|EMBL:CDC49945.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Transcriptional regulator
L3_128_000G1_scaffold_45_17
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17713..18258)
DNA (546bp) protein (182aa)
Nitroreductase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX47_9CLOT
Nitroreductase {ECO:0000313|EMBL:CDC49944.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Nitroreductase
L3_128_000G1_scaffold_45_18
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18271..18813)
DNA (543bp) protein (181aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6STM5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49942.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_45_19
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18895..19995)
DNA (1101bp) protein (367aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3P9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49941.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_45_20
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20055..21902)
DNA (1848bp) protein (616aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQI2_9CLOT
L3_128_000G1_scaffold_45_21
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21915..23297)
DNA (1383bp) protein (461aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX41_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49939.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
MATE efflux family protein
L3_128_000G1_scaffold_45_22
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23479..24858)
DNA (1380bp) protein (460aa)
Putative efflux protein MATE family n=1 Tax=Clostridium sp. CAG:58 RepID=R6RM02_9CLOT
Putative efflux protein MATE family {ECO:0000313|EMBL:CDC49938.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
putative efflux protein, MATE family
L3_128_000G1_scaffold_45_23
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24992..25768)
DNA (777bp) protein (259aa)
Transcriptional regulator IclR family n=1 Tax=Clostridium sp. CAG:81 RepID=R5G1X7_9CLOT
Transcriptional regulator IclR family {ECO:0000313|EMBL:CCY11093.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
transcriptional regulator, IclR family
L3_128_000G1_scaffold_45_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25791..27200)
DNA (1410bp) protein (470aa)
Transcription termination factor Rho {ECO:0000256|HAMAP-Rule:MF_01884}; EC=3.6.4.- {ECO:0000256|HAMAP-Rule:MF_01884};; ATP-dependent helicase Rho {ECO:0000256|HAMAP-Rule:MF_01884}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Transcription termination factor Rho n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQH4_9CLOT
transcription termination factor Rho
L3_128_000G1_scaffold_45_25
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27399..28727)
DNA (1329bp) protein (443aa)
ATPase related to the helicase subunit of the Holliday junction resolvase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX36_9CLOT
ATPase related to the helicase subunit of the Holliday junction resolvase {ECO:0000313|EMBL:CDC49934.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ATPase related to the helicase subunit of the Holliday junction resolvase
L3_128_000G1_scaffold_45_26
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28738..29469)
DNA (732bp) protein (244aa)
Predicted xylanase/chitin deacetylase n=1 Tax=Clostridium sp. CAG:81 RepID=R5G5F3_9CLOT
Predicted xylanase/chitin deacetylase {ECO:0000313|EMBL:CCY11104.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
Predicted xylanase/chitin deacetylase
L3_128_000G1_scaffold_45_27
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29537..31069)
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6STL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49932.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ATPase components of ABC transporters with duplicated ATPase domains
L3_128_000G1_scaffold_45_28
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31460..31882)
DNA (423bp) protein (141aa)
Uncharacterized domain 1 n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3N5_9CLOT
Uncharacterized domain 1 {ECO:0000313|EMBL:CDC49931.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
uncharacterized domain 1
L3_128_000G1_scaffold_45_29
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31848..32846)
DNA (999bp) protein (333aa)
tRNA-dihydrouridine synthase {ECO:0000256|PIRNR:PIRNR006621}; EC=1.-.-.- {ECO:0000256|PIRNR:PIRNR006621};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
tRNA-dihydrouridine synthase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQG9_9CLOT
tRNA-dihydrouridine synthase
L3_128_000G1_scaffold_45_30
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32891..33547)
DNA (657bp) protein (219aa)
HD domain n=1 Tax=Clostridium sp. CAG:58 RepID=R6RX31_9CLOT
HD domain {ECO:0000313|EMBL:CDC49929.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
HD domain.
Displaying items 1-30 of 163 in total

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