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L3_128_000G1_scaffold_71

Search features with annotation key words

Displaying items 1-30 of 128 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_71_1
Roseburia inulinivorans, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(94..546)
DNA (453bp) protein (151aa)
Response regulator receiver domain protein (Fragment) n=1 Tax=Roseburia inulinivorans DSM 16841 RepID=C0FTZ9_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EEG93930.1}; Flags: Fragment;; TaxID=622312 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia.;" source="Roseburia inulinivorans DSM 16841.;"
Response regulator of the LytR/AlgR family
L3_128_000G1_scaffold_71_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(576..692)
DNA (117bp) protein (39aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R7R2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34809.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_000G1_scaffold_71_3
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(848..3112)
DNA (2265bp) protein (755aa)
Aconitase A (EC:4.2.1.3)
Aconitase A n=1 Tax=Blautia sp. CAG:52 RepID=R6GBF6_9FIRM
Aconitase A {ECO:0000313|EMBL:CDB21670.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L3_128_000G1_scaffold_71_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(3170..4255)
DNA (1086bp) protein (362aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R2C5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34818.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
transcriptional regulator, CdaR family
L3_128_000G1_scaffold_71_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(4377..5480)
DNA (1104bp) protein (368aa)
Maltodextrin import ATP-binding protein msmX n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R7S1_9FIRM
Maltodextrin import ATP-binding protein msmX {ECO:0000313|EMBL:CCZ34819.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
carbohydrate ABC transporter ATP-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_128_000G1_scaffold_71_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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5999..6808
DNA (810bp) protein (270aa)
Predicted integral membrane protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R0U5_9FIRM
Predicted integral membrane protein {ECO:0000313|EMBL:CCZ34820.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Predicted integral membrane protein
L3_128_000G1_scaffold_71_7
Ruminococcus torques CAG:61, Ruminococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

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7075..7644
DNA (570bp) protein (190aa)
hypothetical protein n=1 Tax=Allobaculum stercoricanis RepID=UPI00036E7BF2
Uncharacterized protein {ECO:0000313|EMBL:CCZ25993.1}; TaxID=1263108 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminococcus; environmental samples.;" source="Ruminococcus torques CAG:61.;"
TetR family transcriptional regulator
L3_128_000G1_scaffold_71_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

7666..8343
DNA (678bp) protein (226aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RPL4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34822.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_128_000G1_scaffold_71_9
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(8455..10815)
DNA (2361bp) protein (787aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R2D1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34823.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Signal transduction histidine kinase
L3_128_000G1_scaffold_71_10
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(10834..11529)
DNA (696bp) protein (232aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R7S5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34824.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
winged helix family two component transcriptional regulator
L3_128_000G1_scaffold_71_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

11821..12720
DNA (900bp) protein (300aa)
Xylose isomerase domain protein TIM barrel n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R0V3_9FIRM
Xylose isomerase domain protein TIM barrel {ECO:0000313|EMBL:CCZ34825.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
xylose isomerase domain-containing protein TIM barrel
L3_128_000G1_scaffold_71_12
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(12848..15991)
DNA (3144bp) protein (1048aa)
Beta-galactosidase {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613}; EC=3.2.1.23 {ECO:0000256|RuleBase:RU361154, ECO:0000256|SAAS:SAAS00046613};; Lactase {ECO:0000256|RuleBase:RU361154}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Beta-galactosidase/beta-glucuronidase (EC:3.2.1.23)
Beta-galactosidase/beta-glucuronidase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJ60_9FIRM
L3_128_000G1_scaffold_71_13
Pediococcus acidilactici, Pediococcus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(16015..17484)
DNA (1470bp) protein (490aa)
Amino acid permease n=1 Tax=Pediococcus acidilactici DSM 20284 RepID=E0NDI8_PEDAC
Amino acid permease {ECO:0000313|EMBL:EFL96309.1}; TaxID=862514 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Pediococcus.;" source="Pediococcus acidilactici DSM 20284.;"
amino acid permease
L3_128_000G1_scaffold_71_14
Megamonas funiformis, Megamonas, Selenomonadales, Negativicutes, Firmicutes, Bacteria

Not on your lists

17725..18603
DNA (879bp) protein (293aa)
Uncharacterized protein n=2 Tax=Megamonas RepID=R6M5M0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHR36435.1}; TaxID=742816 species="Bacteria; Firmicutes; Negativicutes; Selenomonadales; Veillonellaceae; Megamonas.;" source="Megamonas funiformis YIT 11815.;"
transcriptional regulator, AraC family
L3_128_000G1_scaffold_71_15
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

18617..19540
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RPM1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34827.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Permeases of the drug/metabolite transporter (DMT) superfamily
L3_128_000G1_scaffold_71_16
Lachnospiraceae bacterium 2_1_58FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19617..20855)
DNA (1239bp) protein (413aa)
Oxidoreductase, NAD-binding domain protein n=4 Tax=Clostridiales RepID=A7B8B6_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:EGN49325.1}; TaxID=658082 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 2_1_58FAA.;"
oxidoreductase
L3_128_000G1_scaffold_71_17
Firmicutes bacterium CAG:227, Firmicutes, Bacteria

Not on your lists

comp(20877..21707)
DNA (831bp) protein (277aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:227 RepID=R6V599_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC93393.1}; TaxID=1263010 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:227.;"
binding-protein-dependent transport system inner membrane protein
L3_128_000G1_scaffold_71_18
Treponema phagedenis, Treponema, Spirochaetales, Spirochaetia, Spirochaetes, Bacteria

Not on your lists

comp(21721..22617)
DNA (897bp) protein (299aa)
ABC transporter, permease protein n=1 Tax=Treponema phagedenis F0421 RepID=E7NV76_TREPH
ABC transporter, permease protein {ECO:0000313|EMBL:CEM60649.1}; TaxID=162 species="Bacteria; Spirochaetes; Spirochaetales; Spirochaetaceae; Treponema.;" source="Treponema phagedenis.;"
binding-protein-dependent transport system inner membrane protein
L3_128_000G1_scaffold_71_19
Brevibacillus sp. BC25, Brevibacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(22676..23977)
DNA (1302bp) protein (434aa)
ABC-type sugar transport system, periplasmic component n=1 Tax=Brevibacillus sp. BC25 RepID=J2ZUE6_9BACL
ABC-type sugar transport system, periplasmic component {ECO:0000313|EMBL:EJL22971.1}; Flags: Precursor;; TaxID=1144308 species="Bacteria; Firmicutes; Bacilli; Bacillales; Paenibacillaceae; Brevibacillus.;" source="Brevibacillus sp. BC25.;"
ABC transporter substrate-binding protein
L3_128_000G1_scaffold_71_20
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24179..25441)
DNA (1263bp) protein (421aa)
ABC transporter, solute-binding protein n=4 Tax=Clostridiales RepID=A7B8B2_RUMGN
Uncharacterized protein {ECO:0000313|EMBL:ETD16702.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
ABC-type sugar transport system, periplasmic component
L3_128_000G1_scaffold_71_21
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25451..26500)
DNA (1050bp) protein (350aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=R5TPL1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETD16703.1}; TaxID=1073375 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus CC55_001C.;"
AraC family transcriptional regulator
L3_128_000G1_scaffold_71_22
[Ruminococcus] gnavus, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26517..28235)
DNA (1719bp) protein (573aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00155656}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00155656};; TaxID=411470 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia.;" source="Ruminococcus gnavus ATCC 29149.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=4 Tax=Clostridiales RepID=A7B8B0_RUMGN
putative signal transduction protein with a C-terminal ATPase domain
L3_128_000G1_scaffold_71_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(28400..29185)
DNA (786bp) protein (262aa)
5-deoxyglucuronate isomerase (EC:5.3.1.-)
Myo-inositol catabolism protein IolB n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R2D4_9FIRM
Myo-inositol catabolism protein IolB {ECO:0000313|EMBL:CCZ34828.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_000G1_scaffold_71_24
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(29199..31130)
DNA (1932bp) protein (644aa)
3D-(3,5/4)-trihydroxycyclohexane-1,2-dione hydrolase (EC:3.7.1.-)
Thiamine pyrophosphate enzyme central domain protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R7T1_9FIRM
Thiamine pyrophosphate enzyme central domain protein {ECO:0000313|EMBL:CCZ34829.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_000G1_scaffold_71_25
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(31154..32188)
DNA (1035bp) protein (345aa)
5-dehydro-2-deoxygluconokinase (EC:2.7.1.92)
Kinase PfkB family n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R0V9_9FIRM
Kinase PfkB family {ECO:0000313|EMBL:CCZ34830.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_000G1_scaffold_71_26
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(32341..34458)
DNA (2118bp) protein (706aa)
beta-glucosidase (EC:3.2.1.21)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJ65_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34831.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_000G1_scaffold_71_27
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

34675..35661
DNA (987bp) protein (329aa)
3-carboxymuconate cyclase-like protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R7T6_9FIRM
3-carboxymuconate cyclase-like protein {ECO:0000313|EMBL:CCZ34834.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
3-carboxymuconate cyclase
L3_128_000G1_scaffold_71_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(35735..36934)
DNA (1200bp) protein (400aa)
Transporter major facilitator family protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RPN4_9FIRM
Transporter major facilitator family protein {ECO:0000313|EMBL:CCZ34837.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
major Facilitator Superfamily protein
L3_128_000G1_scaffold_71_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(36948..37712)
DNA (765bp) protein (255aa)
Transcriptional regulator DeoR family n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R7T9_9FIRM
Transcriptional regulator DeoR family {ECO:0000313|EMBL:CCZ34839.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
DeoR family transcriptional regulator
L3_128_000G1_scaffold_71_30
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(37735..39246)
DNA (1512bp) protein (504aa)
Methylmalonate-semialdehyde dehydrogenase (Acylating) n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RJ76_9FIRM
Methylmalonate-semialdehyde dehydrogenase (Acylating) {ECO:0000313|EMBL:CCZ34841.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
methylmalonate-semialdehyde dehydrogenase
Displaying items 1-30 of 128 in total

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