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L3_128_000G1_scaffold_87

Search features with annotation key words

Displaying items 1-30 of 201 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_87_1
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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291..1349
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme 90A8 RepID=N9ZF56_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ18672.1}; TaxID=999408 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A8.;"
Transposase DDE domain.
L3_128_000G1_scaffold_87_2
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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1947..3779
DNA (1833bp) protein (611aa)
ATP-dependent zinc metalloprotease FtsH {ECO:0000256|HAMAP-Rule:MF_01458}; EC=3.4.24.- {ECO:0000256|HAMAP-Rule:MF_01458};; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
ATP-dependent metalloprotease FtsH (EC:3.4.24.-)
ATP-dependent zinc metalloprotease FtsH n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXH9_9FIRM
L3_128_000G1_scaffold_87_3
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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3877..5541
DNA (1665bp) protein (555aa)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RL64_9FIRM
L3_128_000G1_scaffold_87_4
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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5541..6944
DNA (1404bp) protein (468aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYW8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33648.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Transcriptional regulators containing a DNA-binding HTH domain and an aminotransferase domain (MocR family) and their eukaryotic orthologs
L3_128_000G1_scaffold_87_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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comp(7029..7340)
DNA (312bp) protein (104aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4I6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33649.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_000G1_scaffold_87_6
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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7510..8178
DNA (669bp) protein (223aa)
haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E (EC:3.1.3.18)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXI2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33650.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_000G1_scaffold_87_7
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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8166..8978
DNA (813bp) protein (271aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RFX2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33651.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
HAD-superfamily hydrolase, subfamily IIB
L3_128_000G1_scaffold_87_8
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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8962..9225
DNA (264bp) protein (88aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RL68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33652.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_128_000G1_scaffold_87_9
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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9270..10640
DNA (1371bp) protein (457aa)
Aldehyde dehydrogenase n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QYX2_9FIRM
Aldehyde dehydrogenase {ECO:0000256|PIRNR:PIRNR036492}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
aldehyde dehydrogenase
L3_128_000G1_scaffold_87_10
Blautia sp. CAG:237, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(10648..11571)
DNA (924bp) protein (308aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:237 RepID=R6L7Q9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB78211.1}; TaxID=1262755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:237.;"
conserved protein of unknown function cotranscribed with Bmr (bmrU)
L3_128_000G1_scaffold_87_11
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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11664..12740
DNA (1077bp) protein (359aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4I9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33654.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
biotin synthase
L3_128_000G1_scaffold_87_12
Firmicutes bacterium CAG:56, Firmicutes, Bacteria

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12744..14156
DNA (1413bp) protein (471aa)
Putative thiazole biosynthesis protein ThiH n=1 Tax=Firmicutes bacterium CAG:56 RepID=R6BR92_9FIRM
Putative thiazole biosynthesis protein ThiH {ECO:0000313|EMBL:CDA63479.1}; TaxID=1263031 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:56.;"
iron-only hydrogenase maturation protein HydG
L3_128_000G1_scaffold_87_13
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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14166..15410
DNA (1245bp) protein (415aa)
GTP-binding protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXI9_9FIRM
GTP-binding protein {ECO:0000313|EMBL:CCZ33660.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
iron-only hydrogenase maturation protein HydF
L3_128_000G1_scaffold_87_14
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

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15407..16420
DNA (1014bp) protein (338aa)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6H651_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB21772.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
transcriptional regulator
L3_128_000G1_scaffold_87_15
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

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16630..17925
DNA (1296bp) protein (432aa)
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) n=1 Tax=Roseburia sp. CAG:471 RepID=R7E735_9FIRM
Carbohydrate ABC transporter substrate-binding protein CUT1 family (TC 3.A.1.1.-) {ECO:0000313|EMBL:CDD98550.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
carbohydrate ABC transporter substrate-binding protein, CUT1 family (TC 3.A.1.1.-)
L3_128_000G1_scaffold_87_16
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17928..18809
DNA (882bp) protein (294aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=R6G7Z0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB20445.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
carbohydrate ABC transporter membrane protein 1, CUT1 family (TC 3.A.1.1.-)
L3_128_000G1_scaffold_87_17
Roseburia sp. CAG:471, Roseburia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18809..19660
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Roseburia sp. CAG:471 RepID=R7EAI4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDD98552.1}; TaxID=1262948 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Roseburia; environmental samples.;" source="Roseburia sp. CAG:471.;"
sugar ABC transporter permease
L3_128_000G1_scaffold_87_18
Blautia sp. CAG:52, Blautia, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19725..20489
DNA (765bp) protein (255aa)
N-acetylmuramoyl-L-alanine amidase (EC:3.5.1.28)
Uncharacterized protein n=1 Tax=Blautia sp. CAG:52 RepID=R6G4J8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDB20443.1}; TaxID=1262758 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Blautia; environmental samples.;" source="Blautia sp. CAG:52.;"
L3_128_000G1_scaffold_87_19
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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20499..21104
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4Q3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33724.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_128_000G1_scaffold_87_20
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(21261..22550)
DNA (1290bp) protein (430aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXP4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33725.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_128_000G1_scaffold_87_21
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

22731..24686
DNA (1956bp) protein (652aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QZ40_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33728.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
RNA polymerase sigma factor
L3_128_000G1_scaffold_87_22
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

24737..25111
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4Q8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33729.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_128_000G1_scaffold_87_23
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

25454..26815
DNA (1362bp) protein (454aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RG18_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33731.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
Arylsulfatase regulator (Fe-S oxidoreductase)
L3_128_000G1_scaffold_87_24
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

26829..28970
DNA (2142bp) protein (714aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RLD6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33732.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
protein translocase subunit secF/protein translocase subunit secD
L3_128_000G1_scaffold_87_25
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

29093..30805
DNA (1713bp) protein (571aa)
exonuclease RecJ (EC:3.1.-.-)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QZ45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ33733.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_000G1_scaffold_87_26
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(30975..32183)
DNA (1209bp) protein (403aa)
Uncharacterized protein conserved in bacteria n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R4R4_9FIRM
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CCZ33734.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
hypothetical protein
L3_128_000G1_scaffold_87_27
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

32312..33418
DNA (1107bp) protein (369aa)
Transcriptional regulator GntR family with LacI sensor n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QXQ1_9FIRM
Transcriptional regulator GntR family with LacI sensor {ECO:0000313|EMBL:CCZ33735.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
LacI family transcriptional regulator
L3_128_000G1_scaffold_87_28
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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33834..35234
DNA (1401bp) protein (467aa)
Extracellular solute-binding protein family 1 n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RG21_9FIRM
Extracellular solute-binding protein family 1 {ECO:0000313|EMBL:CCZ33736.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
extracellular solute-binding protein
L3_128_000G1_scaffold_87_29
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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35260..36165
DNA (906bp) protein (302aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5RLE1_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCZ33737.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
binding-protein-dependent transport system inner membrane protein
L3_128_000G1_scaffold_87_30
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

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36176..37042
DNA (867bp) protein (289aa)
Binding-protein-dependent transport systems inner membrane component n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5QZ50_9FIRM
Binding-protein-dependent transport systems inner membrane component {ECO:0000313|EMBL:CCZ33738.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
binding-protein-dependent transport system inner membrane protein
Displaying items 1-30 of 201 in total

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