ggKbase home page

L3_128_000G1_scaffold_103

Search features with annotation key words

Displaying items 1-30 of 112 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_103_1
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(148..2136)
DNA (1989bp) protein (663aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78673.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type oligopeptide transport system, periplasmic component
L3_128_000G1_scaffold_103_2
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2386..4386)
DNA (2001bp) protein (667aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D0E0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78674.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type oligopeptide transport system, periplasmic component
L3_128_000G1_scaffold_103_3
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4656..6716)
DNA (2061bp) protein (687aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSQ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78675.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type oligopeptide transport system, periplasmic component
L3_128_000G1_scaffold_103_4
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6976..8979)
DNA (2004bp) protein (668aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3J5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78676.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type oligopeptide transport system, periplasmic component
L3_128_000G1_scaffold_103_5
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9310..11325)
DNA (2016bp) protein (672aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:169 RepID=R6BF87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA61830.1}; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
ABC-type oligopeptide transport system, periplasmic component
L3_128_000G1_scaffold_103_6
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11734..12153)
DNA (420bp) protein (140aa)
Predicted DNA-binding protein with PD1-like DNA-binding motif n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPQ6_9CLOT
Predicted DNA-binding protein with PD1-like DNA-binding motif {ECO:0000313|EMBL:CDA78678.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Predicted DNA-binding protein with PD1-like DNA-binding motif
L3_128_000G1_scaffold_103_7
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12169..12531)
DNA (363bp) protein (121aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D0E5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78679.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_128_000G1_scaffold_103_8
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12531..13037)
DNA (507bp) protein (169aa)
Peptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|RuleBase:RU003335}; Short=PDF {ECO:0000256|HAMAP-Rule:MF_00163};; EC=3.5.1.88 {ECO:0000256|HAMAP-Rule:MF_00163, ECO:0000256|SAAS:SAAS00013131};; Polypeptide deformylase {ECO:0000256|HAMAP-Rule:MF_00163}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
def2; peptide deformylase 2 (EC:3.5.1.88)
Peptide deformylase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSQ9_9CLOT
L3_128_000G1_scaffold_103_9
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13059..13640)
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3K0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78681.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
uncharacterized domain HDIG
L3_128_000G1_scaffold_103_10
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13779..14549)
DNA (771bp) protein (257aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DLD3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78682.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
aspartate racemase
L3_128_000G1_scaffold_103_11
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14666..15613
DNA (948bp) protein (316aa)
LysR substrate-binding protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPR0_9CLOT
LysR substrate-binding protein {ECO:0000313|EMBL:CDA78683.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
transcriptional regulator, LysR family
L3_128_000G1_scaffold_103_12
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15669..17420)
DNA (1752bp) protein (584aa)
hydrogenase, Fe-only (EC:1.12.7.2)
NAD(P)-dependent iron-only hydrogenase catalytic subunit n=1 Tax=Clostridium sp. CAG:242 RepID=R6D0F0_9CLOT
NAD(P)-dependent iron-only hydrogenase catalytic subunit {ECO:0000313|EMBL:CDA78684.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_128_000G1_scaffold_103_13
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17398..18717)
DNA (1320bp) protein (440aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78685.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_128_000G1_scaffold_103_14
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18736..19221)
DNA (486bp) protein (162aa)
NADH dehydrogenase (quinone) (EC:1.6.99.5)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3K2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78686.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_128_000G1_scaffold_103_15
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19804..20382)
DNA (579bp) protein (193aa)
DNA-binding helix-turn-helix protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DLD8_9CLOT
DNA-binding helix-turn-helix protein {ECO:0000313|EMBL:CDA78687.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
transcriptional regulator, XRE family
L3_128_000G1_scaffold_103_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20648..22003)
DNA (1356bp) protein (452aa)
MATE efflux family protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPR6_9CLOT
MATE efflux family protein {ECO:0000313|EMBL:CDA78688.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
MATE efflux family protein
L3_128_000G1_scaffold_103_17
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22297..22890
DNA (594bp) protein (198aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D0F5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78689.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
GNAT family acetyltransferase
L3_128_000G1_scaffold_103_18
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22946..24784)
DNA (1839bp) protein (613aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSR7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78690.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC transporter
L3_128_000G1_scaffold_103_19
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24789..26666)
DNA (1878bp) protein (626aa)
ABC transporter related n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3K7_9CLOT
ABC transporter related {ECO:0000313|EMBL:CDA78691.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC transporter
L3_128_000G1_scaffold_103_20
unknown

Not on your lists

comp(26705..26890)
DNA (186bp) protein (62aa)

This feature has no annotations

L3_128_000G1_scaffold_103_21
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27154..27429)
DNA (276bp) protein (92aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DLE4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78692.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_128_000G1_scaffold_103_22
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27575..29869)
DNA (2295bp) protein (765aa)
Alpha-1,4 glucan phosphorylase {ECO:0000256|RuleBase:RU000587}; EC=2.4.1.1 {ECO:0000256|RuleBase:RU000587};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Phosphorylase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPR8_9CLOT
glycogen/starch/alpha-glucan phosphorylase
L3_128_000G1_scaffold_103_23
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29901..31436)
DNA (1536bp) protein (512aa)
4-alpha-glucanotransferase {ECO:0000256|RuleBase:RU361207}; EC=2.4.1.25 {ECO:0000256|RuleBase:RU361207};; Amylomaltase {ECO:0000256|RuleBase:RU361207}; Disproportionating enzyme {ECO:0000256|RuleBase:RU361207}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
4-alpha-glucanotransferase (EC:2.4.1.25)
4-alpha-glucanotransferase n=1 Tax=Clostridium sp. CAG:242 RepID=R6D0G0_9CLOT
L3_128_000G1_scaffold_103_24
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31708..32745
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSS2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78695.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L3_128_000G1_scaffold_103_25
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32897..33979
DNA (1083bp) protein (361aa)
MscS Mechanosensitive ion channel n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3L0_9CLOT
MscS Mechanosensitive ion channel {ECO:0000313|EMBL:CDA78696.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
MscS; small-conductance mechanosensitive channel
L3_128_000G1_scaffold_103_26
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(34026..35126)
DNA (1101bp) protein (367aa)
Aminoacyltransferase FemX n=1 Tax=Clostridium sp. CAG:242 RepID=R6DLE8_9CLOT
Aminoacyltransferase FemX {ECO:0000313|EMBL:CDA78697.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
aminoacyltransferase
L3_128_000G1_scaffold_103_27
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(35148..36671)
DNA (1524bp) protein (508aa)
UDP-N-acetylmuramyl-tripeptide synthetase {ECO:0000256|SAAS:SAAS00085409}; EC=6.3.2.- {ECO:0000256|SAAS:SAAS00276926};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
UDP-N-acetylmuramyl-tripeptide synthetases (EC:6.3.2.13)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPS1_9CLOT
L3_128_000G1_scaffold_103_28
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36823..37467
DNA (645bp) protein (215aa)
Superoxide dismutase {ECO:0000256|RuleBase:RU000414}; EC=1.15.1.1 {ECO:0000256|RuleBase:RU000414};; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Superoxide dismutase (EC:1.15.1.1)
Superoxide dismutase n=1 Tax=Clostridium sp. CAG:242 RepID=R6D0G6_9CLOT
L3_128_000G1_scaffold_103_29
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(37510..38259)
DNA (750bp) protein (250aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
phosphate import ATP-binding protein PstB (EC:3.6.3.27)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSS7_9CLOT
L3_128_000G1_scaffold_103_30
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(38244..39086)
DNA (843bp) protein (281aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3L4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78701.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type phosphate transporter permease
Displaying items 1-30 of 112 in total

View Taxonomy