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L3_128_000G1_scaffold_104

Search features with annotation key words

Displaying items 1-30 of 108 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_104_1
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..178)
DNA (177bp) protein (59aa)
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77594.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_104_2
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(348..524)
DNA (177bp) protein (59aa)
Putative uncharacterized protein n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DIR9_CLOSC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK77593.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_104_3
unknown

Not on your lists

comp(484..744)
DNA (261bp) protein (87aa)

This feature has no annotations

L3_128_000G1_scaffold_104_4
Anoxybacillus ayderensis, Anoxybacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

823..1146
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Marvinbryantia formatexigens DSM 14469 RepID=C6LIP7_9FIRM
Strain AB04 contig000007, whole genome shotgun sequence {ECO:0000313|EMBL:KIP21099.1}; TaxID=265546 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Anoxybacillus.;" source="Anoxybacillus ayderensis.;"
hypothetical protein
L3_128_000G1_scaffold_104_5
Firmicutes bacterium CAG:646, Firmicutes, Bacteria

Not on your lists

comp(1409..1627)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Firmicutes bacterium CAG:646 RepID=R5R9H8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ35414.1}; TaxID=1262995 species="Bacteria; Firmicutes; environmental samples.;" source="Firmicutes bacterium CAG:646.;"
L3_128_000G1_scaffold_104_6
Lachnospiraceae bacterium 3-1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1779..2252
DNA (474bp) protein (158aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 3-1 RepID=R9J0L9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS27684.1}; TaxID=397288 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 3-1.;"
putative helix-turn-helix domain protein
L3_128_000G1_scaffold_104_7
Lachnospiraceae bacterium JC7, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2278..2727
DNA (450bp) protein (150aa)
hypothetical protein n=1 Tax=Clostridium arbusti RepID=UPI000289F7BC
Uncharacterized protein {ECO:0000313|EMBL:ETP73164.1}; TaxID=1165092 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium JC7.;"
hypothetical protein
L3_128_000G1_scaffold_104_8
[Clostridium] symbiosum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2953..3420
DNA (468bp) protein (156aa)
Putative toxin-antitoxin system, toxin component n=1 Tax=Clostridium symbiosum ATCC 14940 RepID=U2C577_CLOSY
Putative toxin-antitoxin system, toxin component {ECO:0000313|EMBL:ERI79675.1}; TaxID=411472 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] symbiosum ATCC 14940.;"
hypothetical protein
L3_128_000G1_scaffold_104_9
[Clostridium] bolteae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3493..4197
DNA (705bp) protein (235aa)
Uncharacterized protein n=2 Tax=Clostridium bolteae RepID=A8S0M2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EDP14106.1}; TaxID=411902 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Clostridium bolteae (strain ATCC BAA-613 / WAL 16351).;"
hypothetical protein
L3_128_000G1_scaffold_104_10
Olsenella sp. oral taxon 809, Olsenella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4247..4594
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Olsenella sp. oral taxon 809 str. F0356 RepID=G5F236_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EHF02785.1}; TaxID=661087 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Atopobiaceae; Olsenella.;" source="Olsenella sp. oral taxon 809 str. F0356.;"
hypothetical protein
L3_128_000G1_scaffold_104_11
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5167..6213
DNA (1047bp) protein (349aa)
Phage integrase family n=1 Tax=Clostridium sp. CAG:149 RepID=R5LQJ7_9CLOT
Phage integrase family {ECO:0000313|EMBL:CCY81485.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Phage integrase family.
L3_128_000G1_scaffold_104_12
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6582..7370)
DNA (789bp) protein (263aa)
phosphonoacetaldehyde hydrolase (EC:3.11.1.1)
Phosphonoacetaldehyde hydrolase {ECO:0000256|HAMAP-Rule:MF_01375, ECO:0000313|EMBL:CBK78375.1}; Short=Phosphonatase {ECO:0000256|HAMAP-Rule:MF_01375};; EC=3.11.1.1 {ECO:0000256|HAMAP-Rule:MF_01375, ECO:0000313|EMBL:CBK78375.1};; Phosphonoacetaldehyde phosphonohydrolase {ECO:0000256|HAMAP-Rule:MF_01375}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Phosphonoacetaldehyde hydrolase n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DL01_CLOSC
L3_128_000G1_scaffold_104_13
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7517..8617)
DNA (1101bp) protein (367aa)
2-aminoethylphosphonate--pyruvate transaminase (EC:2.6.1.37)
2-aminoethylphosphonate--pyruvate transaminase {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569}; EC=2.6.1.37 {ECO:0000256|HAMAP-Rule:MF_01376, ECO:0000256|SAAS:SAAS00009569};; 2-aminoethylphosphonate aminotransferase {ECO:0000256|HAMAP-Rule:MF_01376}; AEP transaminase {ECO:0000256|HAMAP-Rule:MF_01376}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
2-aminoethylphosphonate--pyruvate transaminase n=5 Tax=Clostridiales RepID=D6DL00_CLOSC
L3_128_000G1_scaffold_104_14
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9311..10165)
DNA (855bp) protein (285aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D4C9I9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY81177.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_128_000G1_scaffold_104_15
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10308..11282)
DNA (975bp) protein (325aa)
Beta-lactamase class D n=1 Tax=Clostridium sp. CAG:149 RepID=R5LUW9_9CLOT
Beta-lactamase class D {ECO:0000313|EMBL:CCY81179.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Beta-lactamase class D
L3_128_000G1_scaffold_104_16
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11710..13128)
DNA (1419bp) protein (473aa)
23S rRNA (Uracil-5-)-methyltransferase RumA {ECO:0000313|EMBL:EFE13687.1}; EC=2.1.1.- {ECO:0000313|EMBL:EFE13687.1};; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
23S rRNA m(5)U-1939 methyltransferase (EC:2.1.1.-)
23S rRNA (Uracil-5-)-methyltransferase RumA n=1 Tax=Clostridium sp. M62/1 RepID=D4C9K9_9CLOT
L3_128_000G1_scaffold_104_17
[Clostridium] citroniae, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13750..14994)
DNA (1245bp) protein (415aa)
Uncharacterized protein n=1 Tax=Clostridium clostridioforme CM201 RepID=N9VKY5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHE99532.1}; TaxID=742733 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] citroniae WAL-17108.;"
sodium-dicarboxylate symporter
L3_128_000G1_scaffold_104_18
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15007..16176)
DNA (1170bp) protein (390aa)
Uncharacterized protein n=5 Tax=Clostridium clostridioforme RepID=N9VLJ6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68030.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
Selenocysteine lyase
L3_128_000G1_scaffold_104_19
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16200..16853)
DNA (654bp) protein (218aa)
Uncharacterized protein n=7 Tax=Clostridium clostridioforme RepID=N9X602_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68031.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
hypothetical protein
L3_128_000G1_scaffold_104_20
[Clostridium] clostridioforme, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16863..17240)
DNA (378bp) protein (126aa)
Endoribonuclease L-PSP n=7 Tax=Clostridium clostridioforme RepID=G5HWT8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENZ68032.1}; TaxID=999406 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] clostridioforme 90A6.;"
endoribonuclease L-PSP
L3_128_000G1_scaffold_104_21
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17649..17954)
DNA (306bp) protein (102aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D4C9L1_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCY81578.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_128_000G1_scaffold_104_22
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18061..20553)
DNA (2493bp) protein (831aa)
DNA helicase {ECO:0000256|SAAS:SAAS00145970}; EC=3.6.4.12 {ECO:0000256|SAAS:SAAS00145970};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Superfamily I DNA and RNA helicases (EC:3.6.1.-)
Superfamily I DNA and RNA helicases n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKY1_CLOSC
L3_128_000G1_scaffold_104_23
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20788..21438)
DNA (651bp) protein (217aa)
Flavodoxin family protein n=2 Tax=Clostridiales RepID=D4C9L3_9CLOT
Flavodoxin family protein {ECO:0000313|EMBL:EFE13691.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
Flavodoxin.
L3_128_000G1_scaffold_104_24
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21659..23473)
DNA (1815bp) protein (605aa)
ABC transporter ATP-binding protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5LQS4_9CLOT
ABC transporter ATP-binding protein {ECO:0000313|EMBL:CCY81570.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
ATP-binding cassette, subfamily B
L3_128_000G1_scaffold_104_25
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23473..25233)
DNA (1761bp) protein (587aa)
ABC transporter, ATP-binding protein n=1 Tax=Clostridium sp. M62/1 RepID=D4C9L5_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE13693.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
ABC-type multidrug transport system, ATPase and permease components
L3_128_000G1_scaffold_104_26
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25230..25691)
DNA (462bp) protein (154aa)
Transcriptional regulator, MarR family n=2 Tax=Clostridium RepID=D4C9L6_9CLOT
Transcriptional regulator MarR family {ECO:0000313|EMBL:CCY81559.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_128_000G1_scaffold_104_27
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26021..26473
DNA (453bp) protein (151aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D4C9L7_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK78350.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_104_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26618..28000)
DNA (1383bp) protein (461aa)
Transporter n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DKX5_CLOSC
Na+-dependent transporters of the SNF family
Transporter {ECO:0000256|RuleBase:RU003732}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_104_29
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28159..30117)
DNA (1959bp) protein (653aa)
Fructose-1,6-bisphosphatase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; Short=FBPase class 3 {ECO:0000256|HAMAP-Rule:MF_01854};; EC=3.1.3.11 {ECO:0000256|HAMAP-Rule:MF_01854};; D-fructose-1,6-bisphosphate 1-phosphohydrolase class 3 {ECO:0000256|HAMAP-Rule:MF_01854}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein (EC:3.1.3.11)
Fructose-1,6-bisphosphatase class 3 n=1 Tax=Clostridium sp. M62/1 RepID=D4C9L9_9CLOT
L3_128_000G1_scaffold_104_30
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30428..32830)
DNA (2403bp) protein (801aa)
Anaerobic ribonucleoside-triphosphate reductase n=2 Tax=Clostridium RepID=D4C9M1_9CLOT
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:CCY82290.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
anaerobic ribonucleoside-triphosphate reductase
Displaying items 1-30 of 108 in total

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