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L3_128_000G1_scaffold_105

Search features with annotation key words

Displaying items 1-30 of 117 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_105_1
unknown

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120..239
DNA (120bp) protein (40aa)

This feature has no annotations

L3_128_000G1_scaffold_105_2
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(347..1723)
DNA (1377bp) protein (459aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S1H2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49181.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_105_3
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1946..2698
DNA (753bp) protein (251aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Clostridium sp. CAG:58 RepID=R6SRD6_9CLOT
L3_128_000G1_scaffold_105_4
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2689..3825
DNA (1137bp) protein (379aa)
N-acetylglucosamine-6-phosphate deacetylase {ECO:0000256|PIRNR:PIRNR038994}; EC=3.5.1.25 {ECO:0000256|PIRNR:PIRNR038994};; GlcNAc 6-P deacetylase {ECO:0000256|PIRNR:PIRNR038994}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
N-acetylglucosamine 6-phosphate deacetylase (EC:3.5.1.25)
N-acetylglucosamine-6-phosphate deacetylase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RV12_9CLOT
L3_128_000G1_scaffold_105_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4084..4296
DNA (213bp) protein (71aa)
Cold-shock DNA-binding protein family n=1 Tax=Clostridium sp. CAG:58 RepID=R6S1H5_9CLOT
Cold-shock DNA-binding protein family {ECO:0000313|EMBL:CDC49186.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
cold-shock DNA-binding protein family
L3_128_000G1_scaffold_105_6
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4469..4903
DNA (435bp) protein (145aa)
Putative MarR-family protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RJW2_9CLOT
Putative MarR-family protein {ECO:0000313|EMBL:CDC49188.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
regulatory protein MarR
L3_128_000G1_scaffold_105_7
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4983..5603
DNA (621bp) protein (207aa)
YitT family protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RNB0_9CLOT
YitT family protein {ECO:0000313|EMBL:CDC49190.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_105_8
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5783..6355)
DNA (573bp) protein (191aa)
Chromate transporter n=1 Tax=Clostridium sp. CAG:58 RepID=R6SRE4_9CLOT
Chromate transporter {ECO:0000313|EMBL:CDC49192.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
chromate transporter
L3_128_000G1_scaffold_105_9
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6352..6912)
DNA (561bp) protein (187aa)
Chromate transporter n=1 Tax=Clostridium sp. CAG:58 RepID=R6RJW7_9CLOT
Chromate transporter {ECO:0000313|EMBL:CDC49193.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
chromate transporter
L3_128_000G1_scaffold_105_10
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7026..7889
DNA (864bp) protein (288aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RV20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49194.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
LysR family transcriptional regulator
L3_128_000G1_scaffold_105_11
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8053..9135
DNA (1083bp) protein (361aa)
Mannonate dehydratase {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414}; EC=4.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00106, ECO:0000256|SAAS:SAAS00189414};; D-mannonate hydro-lyase {ECO:0000256|HAMAP-Rule:MF_00106}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
mannonate dehydratase (EC:4.2.1.8)
Mannonate dehydratase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RNB3_9CLOT
L3_128_000G1_scaffold_105_12
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9122..10756
DNA (1635bp) protein (545aa)
Mannitol-1-phosphate/altronate dehydrogenases (EC:1.1.1.57)
Mannitol-1-phosphate/altronate dehydrogenases n=1 Tax=Clostridium sp. CAG:58 RepID=R6S1I3_9CLOT
Mannitol-1-phosphate/altronate dehydrogenases {ECO:0000313|EMBL:CDC49196.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_105_13
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10761..12191
DNA (1431bp) protein (477aa)
Uronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013440}; EC=5.3.1.12 {ECO:0000256|HAMAP-Rule:MF_00675, ECO:0000256|SAAS:SAAS00013438};; Glucuronate isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; Uronic isomerase {ECO:0000256|HAMAP-Rule:MF_00675}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Uronate isomerase n=1 Tax=Clostridium sp. CAG:58 RepID=R6SRE8_9CLOT
glucuronate isomerase
L3_128_000G1_scaffold_105_14
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12188..13225
DNA (1038bp) protein (346aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RJX2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49198.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
tripartite ATP-independent periplasmic transporter solute receptor, DctP family
L3_128_000G1_scaffold_105_15
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13235..13711
DNA (477bp) protein (159aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RV24_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49199.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
TRAP-type C4-dicarboxylate transport system, small permease component
L3_128_000G1_scaffold_105_16
Butyricicoccus pullicaecorum, Butyricicoccus, Clostridiales, Clostridia, Firmicutes, Bacteria

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13715..15019
DNA (1305bp) protein (435aa)
TRAP transporter, DctM subunit n=1 Tax=Butyricicoccus pullicaecorum 1.2 RepID=R8W4R9_9CLOT
TRAP transporter, DctM subunit {ECO:0000313|EMBL:EOQ39863.1}; TaxID=1203606 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Butyricicoccus.;" source="Butyricicoccus pullicaecorum 1.2.;"
TRAP dicarboxylate transporter subunit DctM
L3_128_000G1_scaffold_105_17
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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15370..15786
DNA (417bp) protein (139aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RV33_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49209.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_105_18
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15800..20980
DNA (5181bp) protein (1727aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S1J4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49211.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_105_19
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21101..22381
DNA (1281bp) protein (427aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SRG0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49212.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Protein of unknown function (DUF1576).
L3_128_000G1_scaffold_105_20
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22410..23411
DNA (1002bp) protein (334aa)
Predicted membrane protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RV37_9CLOT
Predicted membrane protein {ECO:0000313|EMBL:CDC49214.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Predicted membrane protein
L3_128_000G1_scaffold_105_21
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23555..24937
DNA (1383bp) protein (461aa)
UDP-N-acetylmuramate--L-alanine ligase {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344}; EC=6.3.2.8 {ECO:0000256|HAMAP-Rule:MF_00046, ECO:0000256|SAAS:SAAS00243344};; UDP-N-acetylmuramoyl-L-alanine synthetase {ECO:0000256|HAMAP-Rule:MF_00046}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
UDP-N-acetylmuramate--L-alanine ligase (EC:6.3.2.8)
UDP-N-acetylmuramate--L-alanine ligase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RND4_9CLOT
L3_128_000G1_scaffold_105_22
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25207..26250
DNA (1044bp) protein (348aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5GIB3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY12251.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
primosome subunit DnaD
L3_128_000G1_scaffold_105_23
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26237..27235
DNA (999bp) protein (333aa)
Replicative DNA helicase loader DnaI n=1 Tax=Clostridium sp. CAG:58 RepID=R6RJZ7_9CLOT
Replicative DNA helicase loader DnaI {ECO:0000313|EMBL:CDC49223.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
replicative DNA helicase loader DnaI
L3_128_000G1_scaffold_105_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27293..28471
DNA (1179bp) protein (393aa)
ribose-phosphate pyrophosphokinase (EC:2.7.6.1)
Ribose-phosphate pyrophosphokinase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RV48_9CLOT
Ribose-phosphate pyrophosphokinase {ECO:0000313|EMBL:CDC49224.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_105_25
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28491..29819
DNA (1329bp) protein (443aa)
RNA polymerase sigma-54 factor n=1 Tax=Clostridium sp. CAG:58 RepID=R6RNE3_9CLOT
RNA polymerase sigma-54 factor {ECO:0000313|EMBL:CDC49225.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
RNA polymerase sigma-54 factor
L3_128_000G1_scaffold_105_26
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29843..30871
DNA (1029bp) protein (343aa)
Phospho-2-dehydro-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; EC=2.5.1.54 {ECO:0000256|PIRNR:PIRNR001361};; 3-deoxy-D-arabino-heptulosonate 7-phosphate synthase {ECO:0000256|PIRNR:PIRNR001361}; DAHP synthase {ECO:0000256|PIRNR:PIRNR001361}; Phospho-2-keto-3-deoxyheptonate aldolase {ECO:0000256|PIRNR:PIRNR001361}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
3-deoxy-D-arabinoheptulosonate-7-phosphate synthase (EC:2.5.1.54)
Phospho-2-dehydro-3-deoxyheptonate aldolase n=1 Tax=Clostridium sp. CAG:58 RepID=R6S1K7_9CLOT
L3_128_000G1_scaffold_105_27
unknown

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comp(30954..31259)
DNA (306bp) protein (102aa)

This feature has no annotations

L3_128_000G1_scaffold_105_28
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31280..32686)
DNA (1407bp) protein (469aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Signal transduction histidine kinase n=1 Tax=Clostridium sp. CAG:58 RepID=R6SRH3_9CLOT
Signal transduction histidine kinase
L3_128_000G1_scaffold_105_29
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(32683..33393)
DNA (711bp) protein (237aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=1 Tax=Clostridium sp. CAG:58 RepID=R6RK03_9CLOT
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CDC49228.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_128_000G1_scaffold_105_30
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33416..35803)
DNA (2388bp) protein (796aa)
Endonuclease MutS2 {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084206}; EC=3.1.-.- {ECO:0000256|HAMAP-Rule:MF_00092, ECO:0000256|SAAS:SAAS00084246};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Endonuclease MutS2 n=1 Tax=Clostridium sp. CAG:58 RepID=R6RV53_9CLOT
MutS2 family protein
Displaying items 1-30 of 117 in total

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