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L3_128_000G1_scaffold_112

Search features with annotation key words

Displaying items 1-30 of 154 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_112_1
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1..714
DNA (714bp) protein (238aa)
Peptidase, M23 family n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7V9_9FIRM
Peptidase, M23 family {ECO:0000313|EMBL:EEU96021.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Membrane proteins related to metalloendopeptidases
L3_128_000G1_scaffold_112_2
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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711..1259
DNA (549bp) protein (183aa)
Peptidase family M50 n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K495_9FIRM
Peptidase family M50.
Peptidase family M50 {ECO:0000313|EMBL:CBK98338.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_128_000G1_scaffold_112_3
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1271..3154
DNA (1884bp) protein (628aa)
Radical SAM domain protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF00_9FIRM
Radical SAM domain protein {ECO:0000313|EMBL:EDP19833.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
Fe-S oxidoreductase
L3_128_000G1_scaffold_112_4
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3129..3773
DNA (645bp) protein (215aa)
Radical SAM-linked protein n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF01_9FIRM
Radical SAM-linked protein {ECO:0000313|EMBL:EDP19834.1}; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
hypothetical protein
L3_128_000G1_scaffold_112_5
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4002..4343
DNA (342bp) protein (114aa)
50S ribosomal protein L19 n=2 Tax=Faecalibacterium RepID=E2ZIJ4_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
LSU ribosomal protein L19P
L3_128_000G1_scaffold_112_6
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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4450..5010
DNA (561bp) protein (187aa)
Signal peptidase I {ECO:0000256|RuleBase:RU003993}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU003993};; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PTH7_9FIRM
L3_128_000G1_scaffold_112_7
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5007..5921
DNA (915bp) protein (305aa)
Ribosome biogenesis GTPase A n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIJ7_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
ribosome biogenesis GTP-binding protein YlqF
L3_128_000G1_scaffold_112_8
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5918..6562
DNA (645bp) protein (215aa)
RNase HII (EC:3.1.26.4)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
Ribonuclease HII n=2 Tax=Faecalibacterium prausnitzii RepID=D4K6I4_9FIRM
L3_128_000G1_scaffold_112_9
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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6562..6939
DNA (378bp) protein (126aa)
UPF0102 protein FAEPRAA2165_02386 n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7V1_9FIRM
Predicted endonuclease distantly related to archaeal Holliday junction resolvase
UPF0102 protein FAEPRAA2165_02386 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
L3_128_000G1_scaffold_112_10
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7041..8501
DNA (1461bp) protein (487aa)
Threonine synthase {ECO:0000313|EMBL:EDP19840.1}; EC=4.2.3.1 {ECO:0000313|EMBL:EDP19840.1};; TaxID=411485 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii M21/2.;"
L-threonine synthase (EC:4.2.3.1)
Threonine synthase n=1 Tax=Faecalibacterium prausnitzii M21/2 RepID=A8SF07_9FIRM
L3_128_000G1_scaffold_112_11
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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8552..9265
DNA (714bp) protein (238aa)
Ser/Thr phosphatase family protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6PVY9_9FIRM
Ser/Thr phosphatase family protein {ECO:0000313|EMBL:CDC27740.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Predicted phosphohydrolase
L3_128_000G1_scaffold_112_12
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9546..10862
DNA (1317bp) protein (439aa)
Trigger factor {ECO:0000256|HAMAP-Rule:MF_00303, ECO:0000256|RuleBase:RU003914}; Short=TF {ECO:0000256|HAMAP-Rule:MF_00303};; EC=5.2.1.8 {ECO:0000256|HAMAP-Rule:MF_00303};; PPIase {ECO:0000256|HAMAP-Rule:MF_00303}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Trigger factor n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7U6_9FIRM
trigger factor
L3_128_000G1_scaffold_112_13
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10980..11579
DNA (600bp) protein (200aa)
ATP-dependent Clp protease proteolytic subunit {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU003567}; EC=3.4.21.92 {ECO:0000256|HAMAP-Rule:MF_00444, ECO:0000256|RuleBase:RU000549};; Endopeptidase Clp {ECO:0000256|HAMAP-Rule:MF_00444}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
ATP-dependent Clp protease proteolytic subunit ClpP (EC:3.4.21.92)
ATP-dependent Clp protease proteolytic subunit n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAE0_9FIRM
L3_128_000G1_scaffold_112_14
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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11621..12952
DNA (1332bp) protein (444aa)
ATP-dependent Clp protease ATP-binding subunit ClpX (EC:3.4.21.92)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIK5_9FIRM
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000256|HAMAP-Rule:MF_00175, ECO:0000256|SAAS:SAAS00063387}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
L3_128_000G1_scaffold_112_15
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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13269..14543
DNA (1275bp) protein (425aa)
Transcriptional regulator n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4A8_9FIRM
transcriptional regulator
Transcriptional regulator {ECO:0000313|EMBL:CBK98351.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_128_000G1_scaffold_112_16
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14615..16960
DNA (2346bp) protein (782aa)
Export membrane protein SecF n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7U1_9FIRM
Export membrane protein SecF {ECO:0000313|EMBL:EEU96003.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
protein-export membrane protein SecF
L3_128_000G1_scaffold_112_17
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16979..17452
DNA (474bp) protein (158aa)
Transcriptional repressor NrdR n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7U0_9FIRM
Transcriptional repressor NrdR {ECO:0000256|HAMAP-Rule:MF_00440, ECO:0000256|SAAS:SAAS00087559}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
transcriptional regulator NrdR
L3_128_000G1_scaffold_112_18
unknown

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17563..17727
DNA (165bp) protein (55aa)

This feature has no annotations

L3_128_000G1_scaffold_112_19
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17869..18237)
DNA (369bp) protein (123aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4B1_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98354.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_128_000G1_scaffold_112_20
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18234..18908)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii A2-165 RepID=C7H7T8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EEU96000.1}; TaxID=411483 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii A2-165.;"
Predicted membrane protein
L3_128_000G1_scaffold_112_21
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19015..20463
DNA (1449bp) protein (483aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6R0F0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27767.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Bacillus/Clostridium GerA spore germination protein.
L3_128_000G1_scaffold_112_22
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20460..21263
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6Q404_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC27769.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
hypothetical protein
L3_128_000G1_scaffold_112_23
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21257..22216
DNA (960bp) protein (320aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4B3_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98356.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
L3_128_000G1_scaffold_112_24
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(22223..23572)
DNA (1350bp) protein (450aa)
Signal transduction histidine kinase (EC:2.7.13.3)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121, ECO:0000313|EMBL:CBK98357.1};; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Signal transduction histidine kinase n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4B4_9FIRM
L3_128_000G1_scaffold_112_25
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23569..24258)
DNA (690bp) protein (230aa)
Response regulator receiver domain protein n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIL7_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EFQ06916.1}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
L3_128_000G1_scaffold_112_26
Faecalibacterium sp. CAG:82, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(24255..26072)
DNA (1818bp) protein (606aa)
Na/Pi-cotransporter II-related protein n=1 Tax=Faecalibacterium sp. CAG:82 RepID=R6QAH0_9FIRM
Na/Pi-cotransporter II-related protein {ECO:0000313|EMBL:CDC27781.1}; TaxID=1262898 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium; environmental samples.;" source="Faecalibacterium sp. CAG:82.;"
Na/Pi-cotransporter
L3_128_000G1_scaffold_112_27
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

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26398..27333
DNA (936bp) protein (312aa)
HPr kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058411}; Short=HPrK/P {ECO:0000256|HAMAP-Rule:MF_01249};; EC=2.7.11.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058427};; EC=2.7.4.- {ECO:0000256|HAMAP-Rule:MF_01249, ECO:0000256|SAAS:SAAS00058435};; HPr(Ser) kinase/phosphorylase {ECO:0000256|HAMAP-Rule:MF_01249}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Hpr(Ser) kinase/phosphatase (EC:2.7.1.- 2.7.11.- 2.7.4.-)
HPr kinase/phosphorylase n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIM0_9FIRM
L3_128_000G1_scaffold_112_28
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27356..28258
DNA (903bp) protein (301aa)
UDP-N-acetylenolpyruvoylglucosamine reductase (EC:1.1.1.158)
UDP-N-acetylenolpyruvoylglucosamine reductase {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00041869}; EC=1.3.1.98 {ECO:0000256|HAMAP-Rule:MF_00037, ECO:0000256|SAAS:SAAS00057125};; UDP-N-acetylmuramate dehydrogenase {ECO:0000256|HAMAP-Rule:MF_00037}; TaxID=657322 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii SL3/3.;"
UDP-N-acetylenolpyruvoylglucosamine reductase n=1 Tax=Faecalibacterium prausnitzii SL3/3 RepID=D4K6G6_9FIRM
L3_128_000G1_scaffold_112_29
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28301..29167
DNA (867bp) protein (289aa)
UPF0042 nucleotide-binding protein HMPREF9436_01517 n=1 Tax=Faecalibacterium cf. prausnitzii KLE1255 RepID=E2ZIM2_9FIRM
Nucleotide-binding protein HMPREF9436_01517 {ECO:0000256|HAMAP-Rule:MF_00636}; TaxID=748224 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium cf. prausnitzii KLE1255.;"
Predicted P-loop-containing kinase
L3_128_000G1_scaffold_112_30
Faecalibacterium prausnitzii, Faecalibacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29193..30116
DNA (924bp) protein (308aa)
Putative uncharacterized protein n=1 Tax=Faecalibacterium prausnitzii L2-6 RepID=D4K4C0_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK98363.1}; TaxID=718252 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Faecalibacterium.;" source="Faecalibacterium prausnitzii L2-6.;"
Displaying items 1-30 of 154 in total

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