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L3_128_000G1_scaffold_118

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_118_1
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2..217
DNA (216bp) protein (72aa)
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3V1_9CLOT
Trypsin-like serine proteases typically periplasmic contain C-terminal PDZ domain {ECO:0000313|EMBL:CDC49981.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Trypsin-like serine proteases, typically periplasmic, contain C-terminal PDZ domain
L3_128_000G1_scaffold_118_2
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

360..2033
DNA (1674bp) protein (558aa)
ATP-dependent Clp protease ATP-binding subunit ClpX n=1 Tax=Clostridium sp. CAG:81 RepID=R5G635_9CLOT
ATP-dependent Clp protease ATP-binding subunit ClpX {ECO:0000313|EMBL:CCY12588.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
ATP-dependent Clp protease ATP-binding subunit ClpX
L3_128_000G1_scaffold_118_3
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2016..3722)
DNA (1707bp) protein (569aa)
Subtilase family n=1 Tax=Clostridium sp. CAG:58 RepID=R6RXA0_9CLOT
Subtilase family {ECO:0000313|EMBL:CDC49989.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Subtilase family.
L3_128_000G1_scaffold_118_4
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3879..4379
DNA (501bp) protein (167aa)
Lipoprotein signal peptidase {ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|SAAS:SAAS00112508};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Lipoprotein signal peptidase (EC:3.4.23.36)
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. CAG:58 RepID=R6STA9_9CLOT
L3_128_000G1_scaffold_118_5
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4381..5508
DNA (1128bp) protein (376aa)
UDP-galactopyranose mutase (EC:5.4.99.9)
UDP-galactopyranose mutase n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3C8_9CLOT
UDP-galactopyranose mutase {ECO:0000313|EMBL:CDC49841.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_118_6
Clostridium sp. CAG:81, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5477..6775
DNA (1299bp) protein (433aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:81 RepID=R5G9L7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY12584.1}; TaxID=1262842 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:81.;"
hypothetical protein
L3_128_000G1_scaffold_118_7
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6772..7707
DNA (936bp) protein (312aa)
Predicted glycosyltransferases n=1 Tax=Clostridium sp. CAG:58 RepID=R6RLQ8_9CLOT
Predicted glycosyltransferases {ECO:0000313|EMBL:CDC49838.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Predicted glycosyltransferases
L3_128_000G1_scaffold_118_8
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7792..8367
DNA (576bp) protein (192aa)
dTDP-4-dehydrorhamnose 3,5-epimerase (EC:5.1.3.13)
dTDP-4-dehydrorhamnose 3 5-epimerase n=1 Tax=Clostridium sp. CAG:58 RepID=R6STA4_9CLOT
dTDP-4-dehydrorhamnose 3 5-epimerase {ECO:0000313|EMBL:CDC49837.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_118_9
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8384..9202
DNA (819bp) protein (273aa)
ABC-2 type transporter n=1 Tax=Clostridium sp. CAG:58 RepID=R6S3C2_9CLOT
Transport permease protein {ECO:0000256|RuleBase:RU361157}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ABC-type polysaccharide/polyol phosphate export systems, permease component
L3_128_000G1_scaffold_118_10
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9212..10555
DNA (1344bp) protein (448aa)
ABC-type polysaccharide/polyol phosphate transport system ATPase component n=1 Tax=Clostridium sp. CAG:58 RepID=R6RQ63_9CLOT
ABC-type polysaccharide/polyol phosphate transport system ATPase component {ECO:0000313|EMBL:CDC49835.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
ABC-type polysaccharide/polyol phosphate transport system, ATPase component
L3_128_000G1_scaffold_118_11
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10567..11418
DNA (852bp) protein (284aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RWU5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49834.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_118_12
butyrate-producing bacterium SS3/4, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11415..14564
DNA (3150bp) protein (1050aa)
Predicted glycosyltransferases n=1 Tax=butyrate-producing bacterium SS3/4 RepID=D7GUZ4_9FIRM
Predicted glycosyltransferases {ECO:0000313|EMBL:CBL41636.1}; TaxID=245014 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SS3/4.;"
Predicted glycosyltransferases
L3_128_000G1_scaffold_118_13
unknown

Not on your lists

comp(14704..14862)
DNA (159bp) protein (53aa)

This feature has no annotations

L3_128_000G1_scaffold_118_14
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15422..16150)
DNA (729bp) protein (243aa)
Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) (EC:1.1.1.100)
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) n=1 Tax=Clostridium sp. CAG:58 RepID=R6SRJ7_9CLOT
Dehydrogenases with different specificities (Related to short-chain alcohol dehydrogenases) {ECO:0000313|EMBL:CDC49257.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_118_15
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16586..17560
DNA (975bp) protein (325aa)
thioredoxin-disulfide reductase (EC:1.8.1.9)
Thioredoxin reductase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RVP6_9CLOT
Thioredoxin reductase {ECO:0000313|EMBL:CDC49429.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_118_16
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17576..18946
DNA (1371bp) protein (457aa)
Cell wall-associated hydrolases (Invasion-associated proteins) n=1 Tax=Clostridium sp. CAG:58 RepID=R6S285_9CLOT
Cell wall-associated hydrolases (Invasion-associated proteins) {ECO:0000313|EMBL:CDC49431.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Cell wall-associated hydrolases (invasion-associated proteins)
L3_128_000G1_scaffold_118_17
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18969..19646
DNA (678bp) protein (226aa)
L-serine ammonia-lyase (EC:4.3.1.17)
L-serine ammonia-lyase n=1 Tax=Clostridium sp. CAG:58 RepID=R6RP16_9CLOT
L-serine ammonia-lyase {ECO:0000313|EMBL:CDC49435.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_118_18
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19662..20555
DNA (894bp) protein (298aa)
L-serine dehydratase, iron-sulfur-dependent, alpha subunit (EC:4.3.1.17)
L-serine dehydratase iron-sulfur-dependent alpha subunit n=1 Tax=Clostridium sp. CAG:58 RepID=R6SS48_9CLOT
L-serine dehydratase iron-sulfur-dependent alpha subunit {ECO:0000313|EMBL:CDC49437.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_118_19
unknown

Not on your lists

20569..20748
DNA (180bp) protein (60aa)

This feature has no annotations

L3_128_000G1_scaffold_118_20
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20741..21238)
DNA (498bp) protein (166aa)
Flavodoxin n=1 Tax=Clostridium sp. CAG:58 RepID=R6RVQ4_9CLOT
Flavodoxin {ECO:0000313|EMBL:CDC49439.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
flavodoxin
L3_128_000G1_scaffold_118_21
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21376..21903)
DNA (528bp) protein (176aa)
SSU ribosomal protein S30P/sigma 54 modulation protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S297_9CLOT
SSU ribosomal protein S30P/sigma 54 modulation protein {ECO:0000313|EMBL:CDC49441.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
SSU ribosomal protein S30P/sigma 54 modulation protein
L3_128_000G1_scaffold_118_22
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22533..25112
DNA (2580bp) protein (860aa)
Protein translocase subunit SecA n=1 Tax=Clostridium sp. CAG:58 RepID=R6RKM1_9CLOT
Protein translocase subunit SecA {ECO:0000256|HAMAP-Rule:MF_01382, ECO:0000256|RuleBase:RU003874}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
protein translocase subunit secA
L3_128_000G1_scaffold_118_23
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25129..26265
DNA (1137bp) protein (379aa)
Peptide chain release factor 2 n=1 Tax=Clostridium sp. CAG:58 RepID=R6RP29_9CLOT
Peptide chain release factor 2 {ECO:0000256|HAMAP-Rule:MF_00094, ECO:0000256|SAAS:SAAS00020438}; Short=RF-2 {ECO:0000256|HAMAP-Rule:MF_00094};; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_118_24
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26454..26987
DNA (534bp) protein (178aa)
Acetyltransferase GNAT family n=1 Tax=Clostridium sp. CAG:58 RepID=R6RVR5_9CLOT
Acetyltransferase GNAT family {ECO:0000313|EMBL:CDC49449.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_118_25
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(27118..28545)
DNA (1428bp) protein (476aa)
Putative cell wall binding repeat n=1 Tax=Clostridium sp. CAG:58 RepID=R6S2A9_9CLOT
Putative cell wall binding repeat {ECO:0000313|EMBL:CDC49451.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Putative cell wall binding repeat.
L3_128_000G1_scaffold_118_26
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28817..29764
DNA (948bp) protein (316aa)
ATPase family associated with various cellular activities (AAA) n=1 Tax=Clostridium sp. CAG:58 RepID=R6RKN1_9CLOT
ATPase family associated with various cellular activities (AAA) {ECO:0000313|EMBL:CDC49453.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
methanol dehydrogenase regulatory protein
L3_128_000G1_scaffold_118_27
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29761..30819
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6S2B5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49456.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
hypothetical protein
L3_128_000G1_scaffold_118_28
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30823..31914
DNA (1092bp) protein (364aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6SS73_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49457.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
L3_128_000G1_scaffold_118_29
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31936..33474)
DNA (1539bp) protein (513aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:58 RepID=R6RVS7_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC49459.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
Choline-glycine betaine transporter
L3_128_000G1_scaffold_118_30
Clostridium sp. CAG:58, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33793..34986)
DNA (1194bp) protein (398aa)
Sodium--glutamate symport carrier (GltS) n=1 Tax=Clostridium sp. CAG:58 RepID=R6S2C2_9CLOT
Sodium--glutamate symport carrier (GltS) {ECO:0000313|EMBL:CDC49461.1}; TaxID=1262824 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:58.;"
sodium--glutamate symport carrier (gltS)
Displaying items 1-30 of 104 in total

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