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L3_128_000G1_scaffold_120

Search features with annotation key words

Displaying items 1-30 of 118 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_120_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

567..1460
DNA (894bp) protein (298aa)
Peptidase, U32 family n=5 Tax=Firmicutes RepID=E4LRZ6_9CLOT
Peptidase U32 family protein {ECO:0000313|EMBL:EQJ52354.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Collagenase and related proteases
L3_128_000G1_scaffold_120_2
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1469..2698
DNA (1230bp) protein (410aa)
Peptidase, U32 family {ECO:0000313|EMBL:EFR38385.1}; EC=3.4.-.- {ECO:0000313|EMBL:EFR38385.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Collagenase and related proteases (EC:3.4.-.-)
Peptidase, U32 family n=2 Tax=Firmicutes RepID=E4LRZ5_9CLOT
L3_128_000G1_scaffold_120_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2792..4486
DNA (1695bp) protein (565aa)
Proline--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00011671}; EC=6.1.1.15 {ECO:0000256|HAMAP-Rule:MF_01569, ECO:0000256|SAAS:SAAS00173448};; Prolyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_01569}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
prolyl-tRNA synthetase, family II (EC:6.1.1.15)
Proline--tRNA ligase n=5 Tax=Firmicutes RepID=E4LRZ4_9CLOT
L3_128_000G1_scaffold_120_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5018..6718
DNA (1701bp) protein (567aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LRZ3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38535.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
hypothetical protein
L3_128_000G1_scaffold_120_5
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7026..8225
DNA (1200bp) protein (400aa)
Threonine ammonia-lyase {ECO:0000313|EMBL:EFR38480.1}; EC=4.3.1.19 {ECO:0000313|EMBL:EFR38480.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
putative threonine dehydratase (EC:4.3.1.19)
Threonine ammonia-lyase n=3 Tax=Firmicutes RepID=E4LRZ1_9CLOT
L3_128_000G1_scaffold_120_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8218..8664
DNA (447bp) protein (149aa)
YaiI/YqxD family protein n=3 Tax=Firmicutes RepID=E4LRZ0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ52347.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_120_7
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9116..9943
DNA (828bp) protein (276aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LRY9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR38357.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_128_000G1_scaffold_120_8
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9958..10710
DNA (753bp) protein (251aa)
N-acetylmuramoyl-L-alanine amidase {ECO:0000313|EMBL:EFR38276.1}; EC=3.5.1.28 {ECO:0000313|EMBL:EFR38276.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
N-acetylmuramoyl-L-alanine amidase n=3 Tax=Firmicutes RepID=E4LRY8_9CLOT
hypothetical protein
L3_128_000G1_scaffold_120_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10787..11488
DNA (702bp) protein (234aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRY7_9CLOT
Inhibitor of apoptosis-promoting Bax1 family protein {ECO:0000313|EMBL:EQJ52343.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_120_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11767..12627)
DNA (861bp) protein (287aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BFA7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ52341.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_120_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12906..13871
DNA (966bp) protein (322aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1BFA6_9FIRM
Aspartyl protease family protein {ECO:0000313|EMBL:EQJ52339.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_128_000G1_scaffold_120_12
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14023..14460
DNA (438bp) protein (146aa)
Peptidyl-prolyl cis-trans isomerase B {ECO:0000313|EMBL:EFR38305.1}; EC=5.2.1.8 {ECO:0000313|EMBL:EFR38305.1};; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Peptidyl-prolyl cis-trans isomerase B n=5 Tax=Firmicutes RepID=E4LRY3_9CLOT
ppiB; peptidyl-prolyl cis-trans isomerase
L3_128_000G1_scaffold_120_13
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14462..14806
DNA (345bp) protein (115aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LRY2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84865.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
L3_128_000G1_scaffold_120_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

14816..15142
DNA (327bp) protein (109aa)
Rhodanese-like protein n=7 Tax=Firmicutes RepID=E4LRY1_9CLOT
Sulfurtransferase {ECO:0000256|RuleBase:RU000507}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Rhodanese-related sulfurtransferase
L3_128_000G1_scaffold_120_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15139..15879
DNA (741bp) protein (247aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LRY0_9CLOT
Tyrosine phosphatase family protein {ECO:0000313|EMBL:EQJ52335.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_120_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16046..16777)
DNA (732bp) protein (244aa)
putative RNA methyltransferase (EC:2.1.1.-)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AUF2_9FIRM
RNA 2'-O ribose methyltransferase substrate binding family protein {ECO:0000313|EMBL:EQJ52334.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_128_000G1_scaffold_120_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16901..18550
DNA (1650bp) protein (550aa)
NAD+ synthetase {ECO:0000313|EMBL:EQJ52333.1}; EC=6.3.1.5 {ECO:0000313|EMBL:EQJ52333.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
NAD+ synthetase n=2 Tax=Firmicutes RepID=H1BFA0_9FIRM
NAD(+) synthase
L3_128_000G1_scaffold_120_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18620..19822
DNA (1203bp) protein (401aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NAG2_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ52332.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
permease
L3_128_000G1_scaffold_120_19
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19878..20402
DNA (525bp) protein (175aa)
Acetyltransferase, GNAT family n=5 Tax=Firmicutes RepID=E4LRX6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84854.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_128_000G1_scaffold_120_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20596..21024)
DNA (429bp) protein (143aa)
Uncharacterized protein n=1 Tax=Clostridium difficile P28 RepID=T4NA83_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQJ52330.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_120_21
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(21008..21481)
DNA (474bp) protein (158aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LRX4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDC84851.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
hypothetical protein
L3_128_000G1_scaffold_120_22
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(21762..23429)
DNA (1668bp) protein (556aa)
Na/Pi-cotransporter II-like protein n=4 Tax=Firmicutes RepID=E4LRX3_9CLOT
Na/Pi-cotransporter II-like protein {ECO:0000313|EMBL:EFR38516.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Na/Pi-cotransporter
L3_128_000G1_scaffold_120_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(24233..25906)
DNA (1674bp) protein (558aa)
Na/Pi-cotransporter II-like protein n=5 Tax=Firmicutes RepID=E4LRX1_9CLOT
Na+/Pi-cotransporter family protein {ECO:0000313|EMBL:EQJ52325.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Na/Pi-cotransporter
L3_128_000G1_scaffold_120_24
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26130..28223)
DNA (2094bp) protein (698aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BF93_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO21818.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
glutamine synthetase
L3_128_000G1_scaffold_120_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28559..29095
DNA (537bp) protein (179aa)
Rubrerythrin n=8 Tax=Firmicutes RepID=E2SKA9_9FIRM
Rubrerythrin family protein {ECO:0000313|EMBL:EQJ52321.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
rubrerythrin
L3_128_000G1_scaffold_120_26
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

29341..30738
DNA (1398bp) protein (466aa)
TrkH family potassium uptake protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1BF91_9FIRM
TrkH family potassium uptake protein {ECO:0000313|EMBL:EHO21816.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
putative Ktr system potassium uptake protein B
L3_128_000G1_scaffold_120_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

30751..31428
DNA (678bp) protein (226aa)
TrkA N-terminal domain protein n=7 Tax=Firmicutes RepID=E4LRW4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY86221.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
putative Ktr system potassium uptake protein A
L3_128_000G1_scaffold_120_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31520..32227
DNA (708bp) protein (236aa)
Sporulation protein YunB n=5 Tax=Firmicutes RepID=E4LRW3_9CLOT
Sporulation protein YunB {ECO:0000313|EMBL:EQJ52317.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_120_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(33624..36002)
DNA (2379bp) protein (793aa)
Anaerobic ribonucleoside-triphosphate reductase {ECO:0000313|EMBL:EQJ52316.1}; EC=1.17.4.2 {ECO:0000313|EMBL:EQJ52316.1};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Anaerobic ribonucleoside-triphosphate reductase n=3 Tax=Firmicutes RepID=H1BF88_9FIRM
anaerobic ribonucleoside triphosphate reductase
L3_128_000G1_scaffold_120_30
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(36021..37157)
DNA (1137bp) protein (379aa)
Anaerobic ribonucleoside-triphosphate reductase activating protein n=3 Tax=Erysipelotrichaceae RepID=H1AUD8_9FIRM
Anaerobic ribonucleoside-triphosphate reductase activating protein {ECO:0000313|EMBL:CDC87335.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
PflA; pyruvate-formate lyase-activating enzyme
Displaying items 1-30 of 118 in total

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