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L3_128_000G1_scaffold_130

Search features with annotation key words

Displaying items 1-30 of 102 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_130_1
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

129..2141
DNA (2013bp) protein (671aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DLC4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78672.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type oligopeptide transport system, periplasmic component
L3_128_000G1_scaffold_130_2
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2357..4366
DNA (2010bp) protein (670aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3J1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78671.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type oligopeptide transport system, periplasmic component
L3_128_000G1_scaffold_130_3
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4793..6772
DNA (1980bp) protein (660aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78673.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type oligopeptide transport system, periplasmic component
L3_128_000G1_scaffold_130_4
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7169..9166
DNA (1998bp) protein (666aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPQ1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78673.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC-type oligopeptide transport system, periplasmic component
L3_128_000G1_scaffold_130_5
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9365..10522)
DNA (1158bp) protein (386aa)
4Fe-4S ferredoxin n=1 Tax=Clostridium sp. CAG:242 RepID=R6DJC3_9CLOT
4Fe-4S ferredoxin {ECO:0000313|EMBL:CDA77977.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
4Fe-4S ferredoxin
L3_128_000G1_scaffold_130_6
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11026..11643
DNA (618bp) protein (206aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D1W0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA77976.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Protein of unknown function (DUF1393).
L3_128_000G1_scaffold_130_7
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11864..12610
DNA (747bp) protein (249aa)
ABC transporter related protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQL8_9CLOT
ABC transporter related protein {ECO:0000313|EMBL:CDA77975.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ABC transporter
L3_128_000G1_scaffold_130_8
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12625..13539
DNA (915bp) protein (305aa)
SufB/sufD domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CYH8_9CLOT
SufB/sufD domain protein {ECO:0000313|EMBL:CDA77974.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
sufB/sufD domain protein
L3_128_000G1_scaffold_130_9
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13589..15235)
DNA (1647bp) protein (549aa)
D-alanyl-D-alanine carboxypeptidase (EC:3.4.16.4)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DJB6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA77972.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_128_000G1_scaffold_130_10
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15515..15838
DNA (324bp) protein (108aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQL3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA77970.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Domain of Unknown Function (DUF1540).
L3_128_000G1_scaffold_130_11
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15877..16536)
DNA (660bp) protein (220aa)
Phosphoribosyltransferase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CMM0_9CLOT
Phosphoribosyltransferase {ECO:0000313|EMBL:CDA77968.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
phosphoribosyltransferase
L3_128_000G1_scaffold_130_12
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(16589..17563)
DNA (975bp) protein (325aa)
ROK family protein (putative glucokinase) (EC:2.7.1.2)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D1U9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA77966.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_128_000G1_scaffold_130_13
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17949..19334
DNA (1386bp) protein (462aa)
tRNA-2-methylthio-N(6)-dimethylallyladenosine synthase {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00078006}; EC=2.8.4.3 {ECO:0000256|HAMAP-Rule:MF_01864, ECO:0000256|SAAS:SAAS00077858};; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB {ECO:0000256|HAMAP-Rule:MF_01864}; tRNA-i(6)A37 methylthiotransferase {ECO:0000256|HAMAP-Rule:MF_01864}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
miaB; (Dimethylallyl)adenosine tRNA methylthiotransferase MiaB (EC:2.-.-.-)
(Dimethylallyl)adenosine tRNA methylthiotransferase MiaB n=1 Tax=Clostridium sp. CAG:242 RepID=R6DJA5_9CLOT
L3_128_000G1_scaffold_130_14
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19400..19804
DNA (405bp) protein (135aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CQK4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA77960.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Protein of unknown function (DUF964).
L3_128_000G1_scaffold_130_15
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19959..22589
DNA (2631bp) protein (877aa)
DNA mismatch repair protein MutS n=1 Tax=Clostridium sp. CAG:242 RepID=R6CMK6_9CLOT
DNA mismatch repair protein MutS {ECO:0000256|HAMAP-Rule:MF_00096, ECO:0000256|SAAS:SAAS00184333}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
mutS; DNA mismatch repair protein MutS
L3_128_000G1_scaffold_130_16
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22613..22837
DNA (225bp) protein (75aa)
Helix-turn-helix domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DJ99_9CLOT
Helix-turn-helix domain protein {ECO:0000313|EMBL:CDA77957.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
helix-turn-helix domain-containing protein
L3_128_000G1_scaffold_130_17
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22872..25004
DNA (2133bp) protein (711aa)
DNA mismatch repair protein MutL n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPL0_9CLOT
DNA mismatch repair protein MutL {ECO:0000313|EMBL:CDA78618.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
DNA mismatch repair protein MutL
L3_128_000G1_scaffold_130_18
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25036..25992
DNA (957bp) protein (319aa)
tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783}; EC=2.5.1.75 {ECO:0000256|HAMAP-Rule:MF_00185, ECO:0000256|RuleBase:RU003783};; Dimethylallyl diphosphate:tRNA dimethylallyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; Isopentenyl-diphosphate:tRNA isopentenyltransferase {ECO:0000256|HAMAP-Rule:MF_00185}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
miaA; tRNA delta(2)-isopentenylpyrophosphate transferase (EC:2.5.1.75)
tRNA dimethylallyltransferase n=1 Tax=Clostridium sp. CAG:242 RepID=R6DL73_9CLOT
L3_128_000G1_scaffold_130_19
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26073..26333
DNA (261bp) protein (87aa)
RNA-binding protein Hfq n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3E6_9CLOT
RNA-binding protein Hfq {ECO:0000256|HAMAP-Rule:MF_00436, ECO:0000256|SAAS:SAAS00067493}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
RNA chaperone Hfq
L3_128_000G1_scaffold_130_20
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26361..27653
DNA (1293bp) protein (431aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSK5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78615.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L3_128_000G1_scaffold_130_21
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27640..28389
DNA (750bp) protein (250aa)
Pyridoxal phosphate enzyme YggS family n=1 Tax=Clostridium sp. CAG:242 RepID=R6D085_9CLOT
Pyridoxal phosphate enzyme YggS family {ECO:0000313|EMBL:CDA78614.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
pyridoxal phosphate enzyme, YggS family
L3_128_000G1_scaffold_130_22
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28398..28850
DNA (453bp) protein (151aa)
Cell division protein SepF n=1 Tax=Clostridium sp. CAG:242 RepID=R6CPK7_9CLOT
Cell division protein SepF {ECO:0000256|HAMAP-Rule:MF_01197}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L3_128_000G1_scaffold_130_23
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28881..29684
DNA (804bp) protein (268aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6DL68_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78612.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
hypothetical protein
L3_128_000G1_scaffold_130_24
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

29742..30611
DNA (870bp) protein (290aa)
DivIVA domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3E2_9CLOT
DivIVA domain protein {ECO:0000313|EMBL:CDA78611.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
DivIVA domain
L3_128_000G1_scaffold_130_25
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30662..33448
DNA (2787bp) protein (929aa)
Isoleucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059}; EC=6.1.1.5 {ECO:0000256|HAMAP-Rule:MF_02002, ECO:0000256|SAAS:SAAS00106059};; Isoleucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_02002}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
ileS; Isoleucine-tRNA ligase (EC:6.1.1.5)
Isoleucine--tRNA ligase n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSK0_9CLOT
L3_128_000G1_scaffold_130_26
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33541..34044
DNA (504bp) protein (168aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|RuleBase:RU000594};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Lipoprotein signal peptidase n=1 Tax=Clostridium sp. CAG:242 RepID=R6D080_9CLOT
lipoprotein signal peptidase
L3_128_000G1_scaffold_130_27
Clostridium sp. CAG:169, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

34037..35050
DNA (1014bp) protein (338aa)
Pseudouridine synthase {ECO:0000256|RuleBase:RU362028}; EC=5.4.99.- {ECO:0000256|RuleBase:RU362028};; TaxID=1262778 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:169.;"
ribosomal large subunit pseudouridine synthase D (EC:5.4.99.- 5.4.99.12)
Pseudouridine synthase n=1 Tax=Clostridium sp. CAG:169 RepID=R6BG41_9CLOT
L3_128_000G1_scaffold_130_28
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35043..35870
DNA (828bp) protein (276aa)
HAD hydrolase family IIB n=1 Tax=Clostridium sp. CAG:242 RepID=R6DL65_9CLOT
HAD hydrolase family IIB {ECO:0000313|EMBL:CDA78607.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
HAD-superfamily hydrolase
L3_128_000G1_scaffold_130_29
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35916..36758
DNA (843bp) protein (281aa)
Transketolase, N-terminal subunit (EC:2.2.1.1)
Transketolase thiamine diphosphate binding domain protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6D3D8_9CLOT
Transketolase thiamine diphosphate binding domain protein {ECO:0000313|EMBL:CDA78606.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
L3_128_000G1_scaffold_130_30
Clostridium sp. CAG:242, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

36784..37728
DNA (945bp) protein (315aa)
Transketolase, C-terminal subunit (EC:2.2.1.1)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:242 RepID=R6CSJ5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA78605.1}; TaxID=1262783 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:242.;"
Displaying items 1-30 of 102 in total

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