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L3_128_000G1_scaffold_138

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_138_1
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(1..333)
DNA (333bp) protein (111aa)
Alcohol dehydrogenase, iron-dependent {ECO:0000313|EMBL:EEP44329.1}; EC=1.1.1.1 {ECO:0000313|EMBL:EEP44329.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Alcohol dehydrogenase, iron-dependent n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA20_9ACTN
iron-containing alcohol dehydrogenase
L3_128_000G1_scaffold_138_2
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

529..1023
DNA (495bp) protein (165aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA22_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44331.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_000G1_scaffold_138_3
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

1174..2256
DNA (1083bp) protein (361aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA23_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44332.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
response regulator receiver and SARP domain-containing protein
L3_128_000G1_scaffold_138_4
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

2256..3281
DNA (1026bp) protein (342aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA24_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44333.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_000G1_scaffold_138_5
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3309..3788
DNA (480bp) protein (160aa)
Peptidyl-prolyl cis-trans isomerase {ECO:0000256|RuleBase:RU003915}; EC=5.2.1.8 {ECO:0000256|RuleBase:RU003915};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Peptidyl-prolyl cis-trans isomerase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA25_9ACTN
FKBP-type peptidyl-prolyl cis-trans isomerase
L3_128_000G1_scaffold_138_6
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

3790..4587
DNA (798bp) protein (266aa)
4Fe-4S binding domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA26_9ACTN
4Fe-4S binding domain protein {ECO:0000313|EMBL:EEP44335.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
thiamine pyrophosphate TPP-binding domain-containing protein
L3_128_000G1_scaffold_138_7
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

4611..6818
DNA (2208bp) protein (736aa)
CobB/CobQ-like protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA27_9ACTN
CobB/CobQ-like protein {ECO:0000313|EMBL:EEP44336.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Predicted glutamine amidotransferase
L3_128_000G1_scaffold_138_8
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(6926..7450)
DNA (525bp) protein (175aa)
BioY family protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA28_9ACTN
BioY family protein {ECO:0000313|EMBL:EEP44337.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
biotin biosynthesis protein BioY
L3_128_000G1_scaffold_138_9
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(7617..9707)
DNA (2091bp) protein (697aa)
Glutamate--ammonia ligase, catalytic domain protein {ECO:0000313|EMBL:EEP44338.1}; EC=6.3.1.2 {ECO:0000313|EMBL:EEP44338.1};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Glutamate--ammonia ligase, catalytic domain protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA29_9ACTN
glutamine synthetase catalytic subunit
L3_128_000G1_scaffold_138_10
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(9809..11173)
DNA (1365bp) protein (455aa)
UPF0210 protein COLINT_02922 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA30_9ACTN
UPF0210 protein COLINT_02922 {ECO:0000256|HAMAP-Rule:MF_01221}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_000G1_scaffold_138_11
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

11433..11732
DNA (300bp) protein (100aa)
RNA-binding protein, YhbY family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA31_9ACTN
RNA-binding protein, YhbY family {ECO:0000313|EMBL:EEP44340.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
hypothetical protein
L3_128_000G1_scaffold_138_12
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(11831..14902)
DNA (3072bp) protein (1024aa)
Uncharacterized protein n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA32_9ACTN
Uncharacterized protein {ECO:0000313|EMBL:EEP44341.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
SARP family transcriptional regulator
L3_128_000G1_scaffold_138_13
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(15237..15965)
DNA (729bp) protein (243aa)
Glucosamine-6-phosphate deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; EC=3.5.99.6 {ECO:0000256|HAMAP-Rule:MF_01241};; GlcN6P deaminase {ECO:0000256|HAMAP-Rule:MF_01241}; Glucosamine-6-phosphate isomerase {ECO:0000256|HAMAP-Rule:MF_01241}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
glucosamine-6-phosphate isomerase (EC:3.5.99.6)
Glucosamine-6-phosphate deaminase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA33_9ACTN
L3_128_000G1_scaffold_138_14
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16212..16709)
DNA (498bp) protein (166aa)
PTS system, glucose subfamily, IIA component n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA35_9ACTN
PTS system, glucose subfamily, IIA component {ECO:0000313|EMBL:EEP44344.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
Glc family PTS system transporter subunit IIA
L3_128_000G1_scaffold_138_15
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(16778..18115)
DNA (1338bp) protein (446aa)
Phosphoglucosamine mutase {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327}; EC=5.4.2.10 {ECO:0000256|HAMAP-Rule:MF_01554, ECO:0000256|RuleBase:RU004327};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
phosphoglucosamine mutase (EC:5.4.2.10)
Phosphoglucosamine mutase n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA36_9ACTN
L3_128_000G1_scaffold_138_16
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(18251..18646)
DNA (396bp) protein (132aa)
30S ribosomal protein S9 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA37_9ACTN
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
30S ribosomal protein S9P
L3_128_000G1_scaffold_138_17
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists


comp(18650..19093)
DNA (444bp) protein (148aa)
50S ribosomal protein L13 n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA38_9ACTN
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|RuleBase:RU003878}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
50S ribosomal protein L13
L3_128_000G1_scaffold_138_18
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(19276..20148)
DNA (873bp) protein (291aa)
Phospholipase, patatin family n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA39_9ACTN
Phospholipase, patatin family {ECO:0000313|EMBL:EEP44348.1}; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
patatin
L3_128_000G1_scaffold_138_19
Anaerotruncus sp. G3(2012), Anaerotruncus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20925..22430)
DNA (1506bp) protein (502aa)
Uncharacterized protein n=1 Tax=Anaerotruncus sp. G3(2012) RepID=R9M3T0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EOS62547.1}; TaxID=1235835 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Anaerotruncus.;" source="Anaerotruncus sp. G3(2012).;"
putative phage integrase
L3_128_000G1_scaffold_138_20
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(22582..23145)
DNA (564bp) protein (188aa)
Phage P1-related protein n=1 Tax=Firmicutes bacterium CAG:555 RepID=R5D8H2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGI73154.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
phage P1-like protein
L3_128_000G1_scaffold_138_21
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(23142..23909)
DNA (768bp) protein (256aa)
Uncharacterized protein n=1 Tax=Eubacterium dolichum CAG:375 RepID=R7G799_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:KGI73155.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
rflA; phage P1-related protein in restrction modification operon RflA
L3_128_000G1_scaffold_138_22
unknown

Not on your lists

24015..24122
DNA (108bp) protein (36aa)

This feature has no annotations

L3_128_000G1_scaffold_138_23
unknown

Not on your lists

comp(24093..24665)
DNA (573bp) protein (191aa)

This feature has no annotations

L3_128_000G1_scaffold_138_24
unknown

Not on your lists

comp(24721..25029)
DNA (309bp) protein (103aa)

This feature has no annotations

L3_128_000G1_scaffold_138_25
unknown

Not on your lists

25072..25182
DNA (111bp) protein (37aa)

This feature has no annotations

L3_128_000G1_scaffold_138_26
Eggerthella lenta, Eggerthella, Eggerthellales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(25188..25853)
DNA (666bp) protein (222aa)
SOS response transcriptional repressor, RecA-mediated autopeptidase n=1 Tax=Cryptobacterium curtum (strain ATCC 700683 / DSM 15641 / 12-3) RepID=C7MM90_CRYCD
Uncharacterized protein {ECO:0000313|EMBL:KGI73161.1}; TaxID=742768 species="Bacteria; Actinobacteria; Coriobacteriia; Eggerthellales; Eggerthellaceae; Eggerthella.;" source="Eggerthella lenta 1_1_60AFAA.;"
SOS response transcriptional repressor, RecA-mediated autopeptidase
L3_128_000G1_scaffold_138_27
unknown

Not on your lists

26262..26435
DNA (174bp) protein (58aa)

This feature has no annotations

L3_128_000G1_scaffold_138_28
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(26750..28438)
DNA (1689bp) protein (563aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B {ECO:0000256|HAMAP-Rule:MF_00121}; Short=Asp/Glu-ADT subunit B {ECO:0000256|HAMAP-Rule:MF_00121};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00121};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit B (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase, B subunit n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA42_9ACTN
L3_128_000G1_scaffold_138_29
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(28435..29949)
DNA (1515bp) protein (505aa)
Glutamyl-tRNA(Gln) amidotransferase subunit A {ECO:0000256|HAMAP-Rule:MF_00120}; Short=Glu-ADT subunit A {ECO:0000256|HAMAP-Rule:MF_00120};; EC=6.3.5.7 {ECO:0000256|HAMAP-Rule:MF_00120};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
aspartyl/glutamyl-tRNA amidotransferase subunit A (EC:6.3.5.-)
Glutamyl-tRNA(Gln) amidotransferase subunit A n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA43_9ACTN
L3_128_000G1_scaffold_138_30
Collinsella intestinalis, Collinsella, Coriobacteriales, Coriobacteriia, Actinobacteria, Bacteria

Not on your lists

comp(29949..30263)
DNA (315bp) protein (105aa)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C {ECO:0000256|HAMAP-Rule:MF_00122}; Short=Asp/Glu-ADT subunit C {ECO:0000256|HAMAP-Rule:MF_00122};; EC=6.3.5.- {ECO:0000256|HAMAP-Rule:MF_00122};; TaxID=521003 species="Bacteria; Actinobacteria; Coriobacteriia; Coriobacteriales; Coriobacteriaceae; Collinsella.;" source="Collinsella intestinalis DSM 13280.;"
aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C (EC:6.3.5.-)
Aspartyl/glutamyl-tRNA(Asn/Gln) amidotransferase subunit C n=1 Tax=Collinsella intestinalis DSM 13280 RepID=C4FA44_9ACTN
Displaying items 1-30 of 90 in total

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