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L3_128_000G1_scaffold_181

Search features with annotation key words

Displaying items 1-30 of 90 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_181_1
Bifidobacterium bifidum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

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comp(1..90)
DNA (90bp) protein (30aa)
Choloylglycine hydrolase n=2 Tax=Bifidobacterium bifidum RepID=E3EM77_BIFBS
cbh; Choloylglycine hydrolase
Choloylglycine hydrolase {ECO:0000313|EMBL:EKF16757.1}; TaxID=1207543 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium bifidum IPLA 20015.;"
L3_128_000G1_scaffold_181_2
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(568..1611)
DNA (1044bp) protein (348aa)
tRNA N6-adenosine threonylcarbamoyltransferase {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00018957}; EC=2.3.1.234 {ECO:0000256|HAMAP-Rule:MF_01445, ECO:0000256|SAAS:SAAS00182339};; N6-L-threonylcarbamoyladenine synthase {ECO:0000256|HAMAP-Rule:MF_01445}; t(6)A37 threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; tRNA threonylcarbamoyladenosine biosynthesis protein TsaD {ECO:0000256|HAMAP-Rule:MF_01445}; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
tRNA N6-adenosine threonylcarbamoyltransferase n=2 Tax=Bifidobacterium RepID=C0BTD6_9BIFI
O-sialoglycoprotein endopeptidase
L3_128_000G1_scaffold_181_3
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(1661..2221)
DNA (561bp) protein (187aa)
Putative ribosomal-protein-alanine N-acetyltransferase {ECO:0000313|EMBL:BAR01873.1}; Ribosomal-protein-alanine acetyltransferase {ECO:0000313|EMBL:EEB21830.1}; EC=2.3.1.128 {ECO:0000313|EMBL:EEB21830.1};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Ribosomal-protein-alanine acetyltransferase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTV8_9BIFI
alanine acetyltransferase
L3_128_000G1_scaffold_181_4
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(2231..3040)
DNA (810bp) protein (270aa)
Universal bacterial protein YeaZ n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTV9_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR01872.1}; Universal bacterial protein YeaZ {ECO:0000313|EMBL:EEB21831.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
peptidase M22
L3_128_000G1_scaffold_181_5
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3115..3741)
DNA (627bp) protein (209aa)
Hydrolase, P-loop family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTW0_9BIFI
Hydrolase, P-loop family {ECO:0000313|EMBL:EEB21832.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR01871.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ATPase
L3_128_000G1_scaffold_181_6
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(3743..4717)
DNA (975bp) protein (325aa)
DNA polymerase III delta subunit {ECO:0000313|EMBL:BAR01870.1}; DNA polymerase III, delta subunit {ECO:0000313|EMBL:EEB21833.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEB21833.1};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
DNA polymerase III, delta subunit n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTW1_9BIFI
DNA polymerase III subunit delta
L3_128_000G1_scaffold_181_7
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(4751..6502)
DNA (1752bp) protein (584aa)
ComEC/Rec2-like protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTW2_9BIFI
ComEC/Rec2-like protein {ECO:0000313|EMBL:EEB21834.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR01869.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
competence protein
L3_128_000G1_scaffold_181_8
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(6499..7275)
DNA (777bp) protein (259aa)
ComEA protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTW3_9BIFI
ComEA protein {ECO:0000313|EMBL:EEB21835.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR01868.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_128_000G1_scaffold_181_9
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists


comp(7442..10414)
DNA (2973bp) protein (991aa)
Leucine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00049}; EC=6.1.1.4 {ECO:0000256|HAMAP-Rule:MF_00049};; Leucyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00049}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Leucine--tRNA ligase n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTW4_9BIFI
leucyl-tRNA synthetase
L3_128_000G1_scaffold_181_10
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(10509..11366)
DNA (858bp) protein (286aa)
ABC transporter, substrate-binding protein, family 3 n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTW5_9BIFI
ABC transporter substrate binding component {ECO:0000313|EMBL:BAR01866.1}; ABC transporter, substrate-binding protein, family 3 {ECO:0000313|EMBL:EEB21837.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ABC transporter substrate-binding protein
L3_128_000G1_scaffold_181_11
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(11387..12337)
DNA (951bp) protein (317aa)
CorA-like protein n=3 Tax=Bifidobacterium RepID=B6XTW6_9BIFI
CorA-like protein {ECO:0000313|EMBL:EEB21838.1}; Putative magnesium and cobalt transport protein {ECO:0000313|EMBL:BAR01865.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
magnesium transporter
L3_128_000G1_scaffold_181_12
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(12581..13159)
DNA (579bp) protein (193aa)
Phosphoglycerate mutase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTW7_9BIFI
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEB21839.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
phosphoglycerate mutase
L3_128_000G1_scaffold_181_13
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(13296..14324)
DNA (1029bp) protein (343aa)
Sortase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTW8_9BIFI
Putative sortase {ECO:0000313|EMBL:BAR01863.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
sortase
L3_128_000G1_scaffold_181_14
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(14349..16028)
DNA (1680bp) protein (560aa)
LPXTG-motif cell wall anchor domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTX0_9BIFI
LPXTG-motif cell wall anchor domain protein {ECO:0000313|EMBL:EEB21842.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR01862.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
cell surface protein
L3_128_000G1_scaffold_181_15
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(16345..16749)
DNA (405bp) protein (135aa)
Pyridoxamine 5'-phosphate oxidase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTX2_9BIFI
Pyridoxamine 5'-phosphate oxidase family protein {ECO:0000313|EMBL:EEB21844.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR01861.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
flavin-nucleotide-binding protein
L3_128_000G1_scaffold_181_16
unknown

Not on your lists

17262..17834
DNA (573bp) protein (191aa)

This feature has no annotations

L3_128_000G1_scaffold_181_17
unknown

Not on your lists

17788..18267
DNA (480bp) protein (160aa)

This feature has no annotations

L3_128_000G1_scaffold_181_18
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(18583..19314)
DNA (732bp) protein (244aa)
Phosphoglycerate mutase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTX5_9BIFI
Phosphoglycerate mutase family protein {ECO:0000313|EMBL:EEB21847.1}; Uncharacterized protein {ECO:0000313|EMBL:BAR01859.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
phosphoglycerate mutase
L3_128_000G1_scaffold_181_19
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19421..19828)
DNA (408bp) protein (136aa)
Ribosomal silencing factor RsfS n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XTX6_9BIFI
Ribosomal silencing factor RsfS {ECO:0000256|HAMAP-Rule:MF_01477}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
ribosome-associated protein IOJAP
L3_128_000G1_scaffold_181_20
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(19831..21213)
DNA (1383bp) protein (461aa)
glmU; bifunctional N-acetylglucosamine-1-phosphate uridyltransferase/glucosamine-1-phosphate acetyltransferase (EC:2.3.1.157)
Bifunctional protein GlmU n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU63_9BIFI
Bifunctional protein GlmU {ECO:0000256|HAMAP-Rule:MF_01631, ECO:0000256|SAAS:SAAS00083647}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
L3_128_000G1_scaffold_181_21
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

21511..22002
DNA (492bp) protein (164aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU66_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21851.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
sodium:dicarboxylate symporter
L3_128_000G1_scaffold_181_22
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22071..22661)
DNA (591bp) protein (197aa)
Exonuclease, DNA polymerase III, epsilon subunit family {ECO:0000313|EMBL:EEB21853.1}; EC=2.7.7.7 {ECO:0000313|EMBL:EEB21853.1};; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
Exonuclease, DNA polymerase III, epsilon subunit family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU67_9BIFI
hypothetical protein
L3_128_000G1_scaffold_181_23
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(22810..23928)
DNA (1119bp) protein (373aa)
inosine-5-monophosphate dehydrogenase (EC:1.1.1.205)
Inosine-5-monophosphate dehydrogenase {ECO:0000313|EMBL:AIZ14549.1}; EC=1.1.1.205 {ECO:0000313|EMBL:AIZ14549.1};; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
IMP dehydrogenase family protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU68_9BIFI
L3_128_000G1_scaffold_181_24
Bifidobacterium kashiwanohense, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

24091..25311
DNA (1221bp) protein (407aa)
isocitrate dehydrogenase (EC:1.1.1.42)
Isocitrate dehydrogenase [NADP] {ECO:0000256|PIRNR:PIRNR000108}; EC=1.1.1.42 {ECO:0000256|PIRNR:PIRNR000108};; TaxID=1447716 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium kashiwanohense PV20-2.;"
Isocitrate dehydrogenase [NADP] n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU69_9BIFI
L3_128_000G1_scaffold_181_25
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

25467..26999
DNA (1533bp) protein (511aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU70_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21856.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_128_000G1_scaffold_181_26
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(27141..28955)
DNA (1815bp) protein (605aa)
AMP-binding enzyme n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU71_9BIFI
AMP-binding enzyme {ECO:0000313|EMBL:EEB21857.1}; Putative long-chain-fatty-acid--CoA ligase {ECO:0000313|EMBL:BAR01850.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
AMP-binding protein
L3_128_000G1_scaffold_181_27
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(29072..29683)
DNA (612bp) protein (204aa)
Peptidase, M23 family n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU72_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:BAR01849.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
hypothetical protein
L3_128_000G1_scaffold_181_28
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

29849..30235
DNA (387bp) protein (129aa)
Uncharacterized protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU73_9BIFI
Uncharacterized protein {ECO:0000313|EMBL:EEB21859.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
transcriptional regulator
L3_128_000G1_scaffold_181_29
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

comp(30570..31271)
DNA (702bp) protein (234aa)
ABC transporter, ATP-binding protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU74_9BIFI
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EEB21860.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
macrolide ABC transporter ATP-binding protein
L3_128_000G1_scaffold_181_30
Bifidobacterium catenulatum, Bifidobacterium, Bifidobacteriales, Actinobacteria, Actinobacteria, Bacteria

Not on your lists

31365..33146
DNA (1782bp) protein (594aa)
Putative YjeF domain protein n=1 Tax=Bifidobacterium catenulatum DSM 16992 = JCM 1194 RepID=B6XU75_9BIFI
Putative carbohydrate kinase {ECO:0000313|EMBL:BAR01846.1}; TaxID=566552 species="Bacteria; Actinobacteria; Bifidobacteriales; Bifidobacteriaceae; Bifidobacterium.;" source="Bifidobacterium catenulatum DSM 16992 = JCM 1194 = LMG 11043.;"
carbohydrate kinase
Displaying items 1-30 of 90 in total

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