ggKbase home page

L3_128_000G1_scaffold_192

Search features with annotation key words

Displaying items 1-30 of 98 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_192_1
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

147..3077
DNA (2931bp) protein (977aa)
Chromosome partition protein Smc n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B8D7_9FIRM
Chromosome partition protein Smc {ECO:0000256|HAMAP-Rule:MF_01894}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
chromosome segregation protein SMC
L3_128_000G1_scaffold_192_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3077..4048
DNA (972bp) protein (324aa)
Signal recognition particle receptor FtsY n=5 Tax=Firmicutes RepID=E4LNY7_9CLOT
Signal recognition particle receptor FtsY {ECO:0000256|HAMAP-Rule:MF_00920}; Short=SRP receptor {ECO:0000256|HAMAP-Rule:MF_00920};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
signal recognition particle-docking protein FtsY
L3_128_000G1_scaffold_192_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4041..4355
DNA (315bp) protein (105aa)
UPF0122 protein HMPREF9406_1870 n=5 Tax=Firmicutes RepID=E4LNY8_9CLOT
UPF0122 protein QSI_3148 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
putative DNA-binding protein
L3_128_000G1_scaffold_192_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4371..5564
DNA (1194bp) protein (398aa)
Acetate kinase {ECO:0000256|HAMAP-Rule:MF_00020}; EC=2.7.2.1 {ECO:0000256|HAMAP-Rule:MF_00020};; Acetokinase {ECO:0000256|HAMAP-Rule:MF_00020}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
acetate kinase (EC:2.7.2.1)
Acetate kinase n=5 Tax=Firmicutes RepID=E4LNY9_9CLOT
L3_128_000G1_scaffold_192_5
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5567..6517
DNA (951bp) protein (317aa)
DHHA1 domain protein n=5 Tax=Firmicutes RepID=E4LNZ0_9CLOT
DHHA1 domain protein {ECO:0000313|EMBL:EFR39413.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
Exopolyphosphatase-related proteins
L3_128_000G1_scaffold_192_6
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6639..9140
DNA (2502bp) protein (834aa)
SMI1 / KNR4 family protein n=1 Tax=Clostridium sp. HGF2 RepID=E4LNZ1_9CLOT
SMI1 / KNR4 family protein {ECO:0000313|EMBL:EFR39345.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
GAD-like domain-containing protein
L3_128_000G1_scaffold_192_7
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9158..9847
DNA (690bp) protein (230aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VP45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY85900.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
molecular chaperone
L3_128_000G1_scaffold_192_8
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9844..10851
DNA (1008bp) protein (336aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1AZU5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84253.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
chaperone protein, Hsp70 family
L3_128_000G1_scaffold_192_9
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

10860..12248
DNA (1389bp) protein (463aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1AZU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29009.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_128_000G1_scaffold_192_10
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

12493..15573
DNA (3081bp) protein (1027aa)
DNA-directed DNA polymerase {ECO:0000256|SAAS:SAAS00057170}; EC=2.7.7.7 {ECO:0000256|SAAS:SAAS00057170};; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
DNA polymerase III, alpha subunit n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B8E6_9FIRM
dnaE; DNA polymerase III subunit alpha
L3_128_000G1_scaffold_192_11
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

15592..16080
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B8E7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29011.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
acetyltransferase
L3_128_000G1_scaffold_192_12
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


16509..16820
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=8 Tax=Firmicutes RepID=E2SIS6_9FIRM
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
rplU; 50S ribosomal protein L21
L3_128_000G1_scaffold_192_13
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

16824..17138
DNA (315bp) protein (105aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B8E9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29013.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
hypothetical protein
L3_128_000G1_scaffold_192_14
Erysipelotrichaceae bacterium 3_1_53, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


17141..17425
DNA (285bp) protein (95aa)
50S ribosomal protein L27 n=8 Tax=Firmicutes RepID=E2SIS8_9FIRM
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=658659 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 3_1_53.;"
LSU ribosomal protein L27P
L3_128_000G1_scaffold_192_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17495..18784
DNA (1290bp) protein (430aa)
GTPase Obg n=6 Tax=Firmicutes RepID=E4LP00_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Obg family GTPase CgtA
L3_128_000G1_scaffold_192_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19088..19516)
DNA (429bp) protein (143aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=E4LP01_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ53690.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_192_17
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

19577..20650
DNA (1074bp) protein (358aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium 6_1_45 RepID=H1B8F3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO29017.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Protein kinase domain.
L3_128_000G1_scaffold_192_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20708..21466
DNA (759bp) protein (253aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LP03_9CLOT
Phosphotransferase enzyme family protein {ECO:0000313|EMBL:EQJ53692.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
Protein kinase domain.
L3_128_000G1_scaffold_192_19
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

21510..22079
DNA (570bp) protein (190aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LP04_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EHO29019.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
Telomeric repeat-binding factor 2
L3_128_000G1_scaffold_192_20
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

22207..22971
DNA (765bp) protein (255aa)
Exodeoxyribonuclease III n=4 Tax=unclassified Erysipelotrichaceae RepID=G1VP27_9FIRM
Exodeoxyribonuclease III {ECO:0000313|EMBL:EGX76051.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
exodeoxyribonuclease III
L3_128_000G1_scaffold_192_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23182..23766
DNA (585bp) protein (195aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=H1AZV8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ53695.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_128_000G1_scaffold_192_22
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24199..24837
DNA (639bp) protein (213aa)
Holliday junction ATP-dependent DNA helicase RuvA {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058935}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00031, ECO:0000256|SAAS:SAAS00058896};; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
Holliday junction ATP-dependent DNA helicase RuvA n=7 Tax=Firmicutes RepID=E4LP07_9CLOT
Holliday junction DNA helicase subunit RuvA
L3_128_000G1_scaffold_192_23
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24841..25854
DNA (1014bp) protein (338aa)
Holliday junction ATP-dependent DNA helicase RuvB {ECO:0000256|HAMAP-Rule:MF_00016}; EC=3.6.4.12 {ECO:0000256|HAMAP-Rule:MF_00016};; TaxID=1522 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Clostridium innocuum.;"
Holliday junction ATP-dependent DNA helicase RuvB n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1AZW0_9FIRM
ruvB; Holliday junction ATP-dependent DNA helicase RuvB
L3_128_000G1_scaffold_192_24
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(25856..26209)
DNA (354bp) protein (118aa)
TIGR04097 family integral membrane protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1AZW1_9FIRM
TIGR04097 family integral membrane protein {ECO:0000313|EMBL:EHO29024.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_128_000G1_scaffold_192_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26273..26935
DNA (663bp) protein (221aa)
Uncharacterized protein n=4 Tax=Firmicutes RepID=E4LP10_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EQJ53701.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_192_26
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(26932..28227)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=3 Tax=Erysipelotrichaceae RepID=H1AZW3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC84163.1}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
stage V sporulation protein B
L3_128_000G1_scaffold_192_27
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28378..28668
DNA (291bp) protein (97aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LP12_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY85880.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
L3_128_000G1_scaffold_192_28
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

28665..30956
DNA (2292bp) protein (764aa)
Protein-export membrane protein SecD n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1AZW5_9FIRM
Protein-export membrane protein SecD {ECO:0000313|EMBL:EHO29028.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
bifunctional preprotein translocase subunit SecD/SecF
L3_128_000G1_scaffold_192_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31049..32656
DNA (1608bp) protein (536aa)
putative single-strand DNA-specific exonuclease (EC:3.1.-.-)
Single-stranded-DNA-specific exonuclease RecJ n=4 Tax=Firmicutes RepID=H1AZW6_9FIRM
DHHA1 domain protein {ECO:0000313|EMBL:EQJ53705.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_128_000G1_scaffold_192_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32718..33233
DNA (516bp) protein (172aa)
Adenine phosphoribosyltransferase {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084274}; Short=APRT {ECO:0000256|HAMAP-Rule:MF_00004};; EC=2.4.2.7 {ECO:0000256|HAMAP-Rule:MF_00004, ECO:0000256|SAAS:SAAS00084255};; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
apt; Adenine phosphoribosyltransferase (EC:2.4.2.7)
Adenine phosphoribosyltransferase n=4 Tax=Firmicutes RepID=E4LP15_9CLOT
Displaying items 1-30 of 98 in total

View Taxonomy