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L3_128_000G1_scaffold_199

Search features with annotation key words

Displaying items 1-30 of 85 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_199_1
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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233..655
DNA (423bp) protein (141aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CGU3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE11074.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_128_000G1_scaffold_199_2
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

609..1202
DNA (594bp) protein (198aa)
Predicted metal-dependent hydrolase n=3 Tax=Clostridium RepID=D6DLG0_CLOSC
Predicted metal-dependent hydrolase {ECO:0000313|EMBL:CCY86108.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Predicted metal-dependent hydrolase
L3_128_000G1_scaffold_199_3
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1302..3011
DNA (1710bp) protein (570aa)
Exonuclease RecJ {ECO:0000313|EMBL:CBL36618.1}; EC=3.1.-.- {ECO:0000313|EMBL:CBL36618.1};; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
exonuclease RecJ (EC:3.1.-.-)
Exonuclease RecJ n=3 Tax=Clostridiales RepID=D4MS82_9FIRM
L3_128_000G1_scaffold_199_4
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3171..4400)
DNA (1230bp) protein (410aa)
argininosuccinate synthase (EC:6.3.4.5)
Argininosuccinate synthase {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00013047}; EC=6.3.4.5 {ECO:0000256|HAMAP-Rule:MF_00005, ECO:0000256|SAAS:SAAS00009947};; Citrulline--aspartate ligase {ECO:0000256|HAMAP-Rule:MF_00005}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Argininosuccinate synthase n=3 Tax=Clostridium RepID=D6DLF8_CLOSC
L3_128_000G1_scaffold_199_5
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4671..4829
DNA (159bp) protein (53aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=D4CGT9_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL36620.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_128_000G1_scaffold_199_6
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4954..6282
DNA (1329bp) protein (443aa)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) n=2 Tax=Clostridium RepID=D6DLF6_CLOSC
monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter substrate-binding protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBK78530.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_199_7
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6426..7934
DNA (1509bp) protein (503aa)
monosaccharide ABC transporter ATP-binding protein, CUT2 family (TC 3.A.1.2.-) (EC:3.6.3.17)
ABC transporter, ATP-binding protein n=3 Tax=Clostridium RepID=D4CGT7_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFE11068.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_128_000G1_scaffold_199_8
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7953..9608
DNA (1656bp) protein (552aa)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) n=3 Tax=Clostridium RepID=D6DLF3_CLOSC
monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-)
Monosaccharide ABC transporter membrane protein, CUT2 family (TC 3.A.1.2.-) {ECO:0000313|EMBL:CBK78527.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_199_9
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9984..10259
DNA (276bp) protein (92aa)
Putative uncharacterized protein n=1 Tax=butyrate-producing bacterium SM4/1 RepID=D4MS86_9FIRM
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL36622.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_128_000G1_scaffold_199_10
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10362..11087
DNA (726bp) protein (242aa)
Predicted branched-chain amino acid permease (Azaleucine resistance) n=2 Tax=Clostridiales RepID=D6DLF1_CLOSC
Predicted branched-chain amino acid permease (azaleucine resistance)
Predicted branched-chain amino acid permease (Azaleucine resistance) {ECO:0000313|EMBL:CBK78525.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_199_11
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11121..11444
DNA (324bp) protein (108aa)
Predicted membrane protein n=3 Tax=Clostridiales RepID=D4MS89_9FIRM
Predicted membrane protein
Predicted membrane protein {ECO:0000313|EMBL:CBL36625.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_128_000G1_scaffold_199_12
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11554..12420
DNA (867bp) protein (289aa)
methenyltetrahydrofolate cyclohydrolase/5,10-methylenetetrahydrofolate dehydrogenase (NADP+) (EC:1.5.1.5 3.5.4.9)
Bifunctional protein FolD n=4 Tax=Clostridiales RepID=D4MS90_9FIRM
Bifunctional protein FolD {ECO:0000256|HAMAP-Rule:MF_01576}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_128_000G1_scaffold_199_13
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12623..13369
DNA (747bp) protein (249aa)
Uncharacterized conserved protein n=1 Tax=Clostridium sp. CAG:149 RepID=R5MLH8_9CLOT
Uncharacterized conserved protein {ECO:0000313|EMBL:CCY86131.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
hypothetical protein
L3_128_000G1_scaffold_199_14
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13456..13890
DNA (435bp) protein (145aa)
Uncharacterized protein conserved in bacteria n=2 Tax=Clostridiales RepID=D4MS92_9FIRM
hypothetical protein
Uncharacterized protein conserved in bacteria {ECO:0000313|EMBL:CBL36628.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_128_000G1_scaffold_199_15
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14004..14798
DNA (795bp) protein (265aa)
ComEA protein n=2 Tax=Clostridium RepID=D4CCS1_9CLOT
ComEA protein {ECO:0000313|EMBL:EFE12439.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
competence protein ComEA helix-hairpin-helix repeat region
L3_128_000G1_scaffold_199_16
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14821..15519
DNA (699bp) protein (233aa)
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain n=4 Tax=Clostridiales RepID=D6DLE4_CLOSC
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain
Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain {ECO:0000313|EMBL:CBK78518.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_199_17
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15545..15766
DNA (222bp) protein (74aa)
Uncharacterized protein n=3 Tax=Clostridiales RepID=D4CCS3_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK78517.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_199_18
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15754..16242
DNA (489bp) protein (163aa)
Predicted acetyltransferase n=3 Tax=Clostridium RepID=D6DLE2_CLOSC
Predicted acetyltransferase
Predicted acetyltransferase {ECO:0000313|EMBL:CCY86138.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_128_000G1_scaffold_199_19
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16281..18209
DNA (1929bp) protein (643aa)
Uncharacterized protein n=2 Tax=Clostridium RepID=D4CCS5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CBK78515.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
hypothetical protein
L3_128_000G1_scaffold_199_20
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18329..19492
DNA (1164bp) protein (388aa)
Esterase/lipase n=2 Tax=Clostridium RepID=D6DLE0_CLOSC
Esterase/lipase
Esterase/lipase {ECO:0000313|EMBL:CBK78514.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_199_21
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19458..19937
DNA (480bp) protein (160aa)
Ribosomal RNA large subunit methyltransferase H {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039794}; EC=2.1.1.177 {ECO:0000256|HAMAP-Rule:MF_00658, ECO:0000256|SAAS:SAAS00039776};; 23S rRNA (pseudouridine1915-N3)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; 23S rRNA m3Psi1915 methyltransferase {ECO:0000256|HAMAP-Rule:MF_00658}; rRNA (pseudouridine-N3-)-methyltransferase RlmH {ECO:0000256|HAMAP-Rule:MF_00658}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
Ribosomal RNA large subunit methyltransferase H n=1 Tax=Clostridium sp. CAG:149 RepID=R5MLJ7_9CLOT
conserved hypothetical protein TIGR00246
L3_128_000G1_scaffold_199_22
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20045..21091
DNA (1047bp) protein (349aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=D4CCS8_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBL36633.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_128_000G1_scaffold_199_23
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21152..21760
DNA (609bp) protein (203aa)
Lysophospholipase L1 and related esterases (EC:3.1.1.2)
Lysophospholipase L1 and related esterases {ECO:0000313|EMBL:CBK78507.1}; EC=3.1.1.2 {ECO:0000313|EMBL:CBK78507.1};; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
Lysophospholipase L1 and related esterases n=2 Tax=Clostridium RepID=D6DLD3_CLOSC
L3_128_000G1_scaffold_199_24
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21830..23188
DNA (1359bp) protein (453aa)
Putative efflux protein, MATE family n=1 Tax=Clostridium cf. saccharolyticum K10 RepID=D6DLD2_CLOSC
putative efflux protein, MATE family
Putative efflux protein, MATE family {ECO:0000313|EMBL:CBK78506.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_199_25
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(23311..23955)
DNA (645bp) protein (215aa)
Predicted acetyltransferase n=2 Tax=Clostridium RepID=D6DLD1_CLOSC
Predicted acetyltransferase
Acetyltransferase, GNAT family {ECO:0000313|EMBL:EFE12449.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
L3_128_000G1_scaffold_199_26
butyrate-producing bacterium SM4/1, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24327..25286
DNA (960bp) protein (320aa)
Transglutaminase-like superfamily n=2 Tax=Clostridiales RepID=D4MS99_9FIRM
Transglutaminase-like superfamily.
Transglutaminase-like superfamily {ECO:0000313|EMBL:CBL36635.1}; TaxID=245012 species="Bacteria; Firmicutes; Clostridia; Clostridiales.;" source="butyrate-producing bacterium SM4/1.;"
L3_128_000G1_scaffold_199_27
Clostridium sp. CAG:149, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25353..26519
DNA (1167bp) protein (389aa)
Predicted oxidoreductases of the aldo/keto reductase family n=3 Tax=Clostridiales RepID=D4MSA0_9FIRM
Predicted oxidoreductases of the aldo/keto reductase family
Predicted oxidoreductases of the aldo/keto reductase family {ECO:0000313|EMBL:CCY86165.1}; TaxID=1262776 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:149.;"
L3_128_000G1_scaffold_199_28
[Clostridium] saccharolyticum, Lachnoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26525..26650
DNA (126bp) protein (42aa)
Uncharacterized protein n=3 Tax=Clostridium RepID=D4CCT5_9CLOT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK78502.1}; TaxID=717608 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="[Clostridium] cf. saccharolyticum K10.;"
L3_128_000G1_scaffold_199_29
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26861..27085
DNA (225bp) protein (75aa)
Uncharacterized protein n=1 Tax=Clostridium sp. M62/1 RepID=D4CCT6_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFE12454.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
hypothetical protein
L3_128_000G1_scaffold_199_30
Clostridium sp. M62/1, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27078..27722
DNA (645bp) protein (215aa)
N-6 DNA Methylase n=1 Tax=Clostridium sp. M62/1 RepID=D4CCT7_9CLOT
N-6 DNA Methylase {ECO:0000313|EMBL:EFE12455.1}; TaxID=411486 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. M62/1.;"
type I restriction-modification system, M subunit
Displaying items 1-30 of 85 in total

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