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L3_128_000G1_scaffold_207

Search features with annotation key words

Displaying items 1-30 of 104 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_207_1
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

211..651
DNA (441bp) protein (147aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RXC1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC74080.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ctp40; transposase-related protein
L3_128_000G1_scaffold_207_2
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

651..1748
DNA (1098bp) protein (366aa)
Putative uncharacterized protein n=3 Tax=unclassified Lachnospiraceae RepID=F3AJ32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG88097.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
transposase, IS605 OrfB family protein
L3_128_000G1_scaffold_207_3
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2068..2364
DNA (297bp) protein (99aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RT54_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75807.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
hypothetical protein
L3_128_000G1_scaffold_207_4
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

2615..3301
DNA (687bp) protein (229aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YTH3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65370.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_128_000G1_scaffold_207_5
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3304..3417
DNA (114bp) protein (38aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJE7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87455.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_128_000G1_scaffold_207_6
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3362..3925
DNA (564bp) protein (188aa)
Uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 6_1_37FAA RepID=E9RT56_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75809.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_128_000G1_scaffold_207_7
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3930..4511
DNA (582bp) protein (194aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2YLK2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65368.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_128_000G1_scaffold_207_8
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4584..5150
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y7L6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60106.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
L3_128_000G1_scaffold_207_9
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5183..5743
DNA (561bp) protein (187aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RT59_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65367.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
L3_128_000G1_scaffold_207_10
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5778..6536
DNA (759bp) protein (253aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y6L4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD60108.1}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_128_000G1_scaffold_207_11
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6575..6763
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJE1_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87449.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
L3_128_000G1_scaffold_207_12
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6817..7209
DNA (393bp) protein (131aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2Z5U9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75816.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
L3_128_000G1_scaffold_207_13
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7304..8116
DNA (813bp) protein (271aa)
Putative uncharacterized protein n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJD7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGG87445.1}; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
Subtilisin-like serine proteases
L3_128_000G1_scaffold_207_14
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8134..8877)
DNA (744bp) protein (248aa)
UPF0246 protein HMPREF1215_00452 n=1 Tax=Coprococcus sp. HPP0074 RepID=S2YCW0_9FIRM
UPF0246 protein HMPREF1215_00452 {ECO:0000256|HAMAP-Rule:MF_00652}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
hypothetical protein
L3_128_000G1_scaffold_207_15
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9075..9419
DNA (345bp) protein (115aa)
UPF0122 protein HMPREF1216_01088 n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZN46_9FIRM
UPF0122 protein HMPREF1216_01088 {ECO:0000256|HAMAP-Rule:MF_00245}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
hypothetical protein
L3_128_000G1_scaffold_207_16
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


9421..10770
DNA (1350bp) protein (450aa)
Signal recognition particle protein n=4 Tax=Lachnospiraceae RepID=E9RT67_9FIRM
Signal recognition particle protein {ECO:0000256|HAMAP-Rule:MF_00306}; Fifty-four homolog {ECO:0000256|HAMAP-Rule:MF_00306}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
signal recognition particle protein
L3_128_000G1_scaffold_207_17
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


10816..11061
DNA (246bp) protein (82aa)
30S ribosomal protein S16 n=4 Tax=Lachnospiraceae RepID=E9RS50_9FIRM
30S ribosomal protein S16 {ECO:0000256|HAMAP-Rule:MF_00385}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
SSU ribosomal protein S16P
L3_128_000G1_scaffold_207_18
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11085..11315
DNA (231bp) protein (77aa)
UPF0109 protein HMPREF0490_00464 n=4 Tax=Lachnospiraceae RepID=E9RS51_9FIRM
UPF0109 protein HMPREF0490_00464 {ECO:0000256|HAMAP-Rule:MF_00088}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
RNA-binding protein (KH domain)
L3_128_000G1_scaffold_207_19
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11345..11914
DNA (570bp) protein (190aa)
Ribosome maturation factor RimM n=3 Tax=Lachnospiraceae RepID=F3AJD1_9FIRM
Ribosome maturation factor RimM {ECO:0000256|HAMAP-Rule:MF_00014, ECO:0000256|SAAS:SAAS00006662}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
rimM; 16S rRNA-processing protein RimM
L3_128_000G1_scaffold_207_20
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11918..12676
DNA (759bp) protein (253aa)
tRNA (guanine-N(1)-)-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464}; EC=2.1.1.228 {ECO:0000256|HAMAP-Rule:MF_00605, ECO:0000256|RuleBase:RU003464};; M1G-methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; tRNA [GM37] methyltransferase {ECO:0000256|HAMAP-Rule:MF_00605}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
tRNA (guanine-N1)-methyltransferase (EC:2.1.1.31)
tRNA (guanine-N(1)-)-methyltransferase n=3 Tax=Lachnospiraceae RepID=E9RS54_9FIRM
L3_128_000G1_scaffold_207_21
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


12756..13103
DNA (348bp) protein (116aa)
50S ribosomal protein L19 n=4 Tax=Lachnospiraceae RepID=E9RS55_9FIRM
50S ribosomal protein L19 {ECO:0000256|HAMAP-Rule:MF_00402, ECO:0000256|RuleBase:RU000559}; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
rplS; 50S ribosomal protein L19
L3_128_000G1_scaffold_207_22
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13131..13760
DNA (630bp) protein (210aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=2 Tax=Lachnospiraceae RepID=S2Y6N4_9FIRM
L3_128_000G1_scaffold_207_23
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13783..14634
DNA (852bp) protein (284aa)
Ribosome biogenesis GTPase A n=2 Tax=Lachnospiraceae RepID=E9RS57_9FIRM
Ribosome biogenesis GTPase A {ECO:0000256|PIRNR:PIRNR006230}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
ribosome biogenesis GTP-binding protein YlqF
L3_128_000G1_scaffold_207_24
Lachnospiraceae bacterium 9_1_43BFAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14664..15233
DNA (570bp) protein (190aa)
Signal peptidase I {ECO:0000256|RuleBase:RU362042}; EC=3.4.21.89 {ECO:0000256|RuleBase:RU362042};; TaxID=658088 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 9_1_43BFAA.;"
signal peptidase I, bacterial type (EC:3.4.21.89)
Signal peptidase I n=1 Tax=Lachnospiraceae bacterium 9_1_43BFAA RepID=F3AJC6_9FIRM
L3_128_000G1_scaffold_207_25
Coprococcus sp. HPP0074, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15226..15990
DNA (765bp) protein (255aa)
Ribonuclease HII {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016879}; Short=RNase HII {ECO:0000256|HAMAP-Rule:MF_00052};; EC=3.1.26.4 {ECO:0000256|HAMAP-Rule:MF_00052, ECO:0000256|SAAS:SAAS00016872};; TaxID=1078090 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0074.;"
Ribonuclease HII (EC:3.1.26.4)
Ribonuclease HII n=1 Tax=Coprococcus sp. HPP0074 RepID=S2Y7P9_9FIRM
L3_128_000G1_scaffold_207_26
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16008..16349
DNA (342bp) protein (114aa)
UPF0102 protein HMPREF0490_00473 n=2 Tax=Lachnospiraceae RepID=E9RS60_9FIRM
UPF0102 protein HMPREF0490_00473 {ECO:0000256|HAMAP-Rule:MF_00048}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
conserved hypothetical protein TIGR00252
L3_128_000G1_scaffold_207_27
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16408..17283
DNA (876bp) protein (292aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RS61_9FIRM
Laccase domain protein {ECO:0000256|RuleBase:RU361274}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
conserved hypothetical protein TIGR00726
L3_128_000G1_scaffold_207_28
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17331..18203
DNA (873bp) protein (291aa)
Uncharacterized protein n=3 Tax=Lachnospiraceae RepID=E9RS62_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75833.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
Small-conductance mechanosensitive channel
L3_128_000G1_scaffold_207_29
Lachnospiraceae bacterium 6_1_37FAA, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18523..19917
DNA (1395bp) protein (465aa)
Uncharacterized protein n=2 Tax=Lachnospiraceae RepID=E9RS63_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGC75834.1}; TaxID=658656 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae.;" source="Lachnospiraceae bacterium 6_1_37FAA.;"
MATE efflux family protein
L3_128_000G1_scaffold_207_30
Coprococcus sp. HPP0048, Coprococcus, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(20020..20829)
DNA (810bp) protein (270aa)
Uncharacterized protein n=1 Tax=Coprococcus sp. HPP0048 RepID=S2ZN32_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EPD65344.1}; TaxID=1078091 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Lachnospiraceae; Coprococcus.;" source="Coprococcus sp. HPP0048.;"
ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Displaying items 1-30 of 104 in total

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