ggKbase home page

L3_128_000G1_scaffold_220

Search features with annotation key words

Displaying items 1-30 of 86 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_220_1
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(168..815)
DNA (648bp) protein (216aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGK3_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99189.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_000G1_scaffold_220_2
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(824..1477)
DNA (654bp) protein (218aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHS1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99188.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
phage shock protein A, PspA
L3_128_000G1_scaffold_220_3
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1495..2256)
DNA (762bp) protein (254aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C2F0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR21386.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_128_000G1_scaffold_220_4
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


2738..3886
DNA (1149bp) protein (383aa)
ispH2; 4-hydroxy-3-methylbut-2-enyl diphosphate reductase IspH (EC:1.17.1.2)
Ribosomal protein S1 n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H483_9CLOT
Ribosomal protein S1 {ECO:0000313|EMBL:EEH99186.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_128_000G1_scaffold_220_5
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3961..5379)
DNA (1419bp) protein (473aa)
Pyruvate kinase {ECO:0000256|RuleBase:RU000504}; EC=2.7.1.40 {ECO:0000256|RuleBase:RU000504};; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
Pyruvate kinase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H510_9CLOT
pyruvate kinase
L3_128_000G1_scaffold_220_6
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

5534..6985
DNA (1452bp) protein (484aa)
pepD; aminoacyl-histidine dipeptidase (EC:3.4.13.3)
Aminoacyl-histidine dipeptidase n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGK1_9CLOT
Aminoacyl-histidine dipeptidase {ECO:0000313|EMBL:EEH99184.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_128_000G1_scaffold_220_7
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7173..7889
DNA (717bp) protein (239aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=U6Q1T0_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EJZ50507.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sporulation related domain protein
L3_128_000G1_scaffold_220_8
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8132..8698
DNA (567bp) protein (189aa)
Septum formation protein Maf n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHR7_9CLOT
Maf-like protein CSBG_02807 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
maf; Maf-like protein
L3_128_000G1_scaffold_220_9
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8755..9444
DNA (690bp) protein (230aa)
DNA repair protein RadC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8P2_9CLOT
DNA repair protein RadC {ECO:0000313|EMBL:EEH99180.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
radc; DNA repair protein Radc
L3_128_000G1_scaffold_220_10
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9462..10481
DNA (1020bp) protein (340aa)
MreB/Mrl family cell shape determining protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H480_9CLOT
MreB/Mrl family cell shape determining protein {ECO:0000313|EMBL:EEH99179.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
mreB2; Rod shape-determining protein MreB
L3_128_000G1_scaffold_220_11
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10481..11332
DNA (852bp) protein (284aa)
Rod shape-determining protein MreC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H509_9CLOT
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
mreC; rod shape-determining protein MreC
L3_128_000G1_scaffold_220_12
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11343..11837
DNA (495bp) protein (165aa)
Rod shape-determining protein MreD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGJ8_9CLOT
Rod shape-determining protein MreD {ECO:0000313|EMBL:EEH99177.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
mreD; rod shape-determining protein, subunit D
L3_128_000G1_scaffold_220_13
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11831..14812
DNA (2982bp) protein (994aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHR5_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99176.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
penicillin-binding Protein dimerisation domain family
L3_128_000G1_scaffold_220_14
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14966..15607
DNA (642bp) protein (214aa)
Septum site-determining protein MinC n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8P0_9CLOT
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
minC; septum formation inhibitor
L3_128_000G1_scaffold_220_15
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15626..16420
DNA (795bp) protein (265aa)
Septum site-determining protein MinD n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H479_9CLOT
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
minD; septum site-determining protein MinD
L3_128_000G1_scaffold_220_16
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16436..16696
DNA (261bp) protein (87aa)
Cell division topological specificity factor n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H508_9CLOT
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
minE; cell division topological specificity factor MinE
L3_128_000G1_scaffold_220_17
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16846..17973
DNA (1128bp) protein (376aa)
Rod shape-determining protein RodA n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGJ5_9CLOT
Rod shape-determining protein RodA {ECO:0000313|EMBL:EEH99172.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
stage V sporulation protein E
L3_128_000G1_scaffold_220_18
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18108..18713
DNA (606bp) protein (202aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHR2_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99171.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
L3_128_000G1_scaffold_220_19
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18799..19659
DNA (861bp) protein (287aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8N9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99170.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
sterol-regulatory element binding protein
L3_128_000G1_scaffold_220_20
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19803..21656
DNA (1854bp) protein (618aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H476_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99169.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
radical SAM superfamily protein
L3_128_000G1_scaffold_220_21
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

21634..22341
DNA (708bp) protein (236aa)
Radical SAM-linked protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H507_9CLOT
Radical SAM-linked protein {ECO:0000313|EMBL:EEH99168.2}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_000G1_scaffold_220_22
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22355..23803
DNA (1449bp) protein (483aa)
Rne/Rng family ribonuclease n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGJ4_9CLOT
Rne/Rng family ribonuclease {ECO:0000313|EMBL:EEH99167.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
ribonuclease, Rne/Rng family domain protein
L3_128_000G1_scaffold_220_23
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


23936..24247
DNA (312bp) protein (104aa)
50S ribosomal protein L21 n=2 Tax=Clostridium RepID=R9C0H2_9CLOT
50S ribosomal protein L21 {ECO:0000256|HAMAP-Rule:MF_01363, ECO:0000256|RuleBase:RU000562}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rplU; 50S ribosomal protein L21
L3_128_000G1_scaffold_220_24
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24253..24627
DNA (375bp) protein (125aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H8N8_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99165.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
hypothetical protein
L3_128_000G1_scaffold_220_25
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists


24629..24928
DNA (300bp) protein (100aa)
50S ribosomal protein L27 n=2 Tax=Clostridium RepID=R9C0K7_9CLOT
50S ribosomal protein L27 {ECO:0000256|HAMAP-Rule:MF_00539}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
rpmA; 50S ribosomal protein L27
L3_128_000G1_scaffold_220_26
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25150..26451
DNA (1302bp) protein (434aa)
GTPase obg n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9H506_9CLOT
GTPase Obg {ECO:0000256|HAMAP-Rule:MF_01454, ECO:0000256|SAAS:SAAS00043060}; GTP-binding protein Obg {ECO:0000256|HAMAP-Rule:MF_01454}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
cgtA; Obg family GTPase CgtA
L3_128_000G1_scaffold_220_27
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26463..26759
DNA (297bp) protein (99aa)
YhbY family putative RNA-binding protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HGJ2_9CLOT
YhbY family putative RNA-binding protein {ECO:0000313|EMBL:EEH99162.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
CRS1 / YhbY domain protein
L3_128_000G1_scaffold_220_28
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26769..27407
DNA (639bp) protein (213aa)
Probable nicotinate-nucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; EC=2.7.7.18 {ECO:0000256|HAMAP-Rule:MF_00244};; Deamido-NAD(+) diphosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Deamido-NAD(+) pyrophosphorylase {ECO:0000256|HAMAP-Rule:MF_00244}; Nicotinate mononucleotide adenylyltransferase {ECO:0000256|HAMAP-Rule:MF_00244}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
nadD; nicotinate (nicotinamide) nucleotide adenylyltransferase (EC:2.7.7.18)
Probable nicotinate-nucleotide adenylyltransferase n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0F7_9CLOT
L3_128_000G1_scaffold_220_29
Clostridium sartagoforme, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27419..27985
DNA (567bp) protein (189aa)
Uncharacterized protein n=1 Tax=Clostridium sartagoforme AAU1 RepID=R9C0M1_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EOR22828.1}; TaxID=1202534 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sartagoforme AAU1.;"
hypothetical protein
L3_128_000G1_scaffold_220_30
Clostridium sp. 7_2_43FAA, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28034..29377
DNA (1344bp) protein (448aa)
Uncharacterized protein n=1 Tax=Clostridium sp. 7_2_43FAA RepID=V9HHQ9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EEH99160.1}; TaxID=457396 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. 7_2_43FAA.;"
membrane-bound protein LytR
Displaying items 1-30 of 86 in total

View Taxonomy