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L3_128_000G1_scaffold_223

Search features with annotation key words

Displaying items 1-30 of 95 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_223_1
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(206..970)
DNA (765bp) protein (255aa)
Protein MtfA n=3 Tax=Citrobacter RepID=J1FW20_9ENTR
Protein MtfA {ECO:0000256|HAMAP-Rule:MF_01593}; Mlc titration factor A {ECO:0000256|HAMAP-Rule:MF_01593}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hypothetical protein
L3_128_000G1_scaffold_223_2
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(2092..3258)
DNA (1167bp) protein (389aa)
Outer membrane porin protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3DTX4_CITFR
Porin {ECO:0000313|EMBL:KJC08830.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
porin
L3_128_000G1_scaffold_223_3
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

3700..4392
DNA (693bp) protein (231aa)
Hydrolase n=2 Tax=Citrobacter freundii RepID=K8QXN9_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL81290.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
hydrolase
L3_128_000G1_scaffold_223_4
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

4499..5899
DNA (1401bp) protein (467aa)
Cytosine-specific methyltransferase {ECO:0000256|RuleBase:RU000417}; EC=2.1.1.37 {ECO:0000256|RuleBase:RU000417};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Cytosine-specific methyltransferase n=3 Tax=Citrobacter RepID=J0VIZ4_9ENTR
DNA cytosine methylase
L3_128_000G1_scaffold_223_5
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

5880..6347
DNA (468bp) protein (156aa)
Very short patch repair protein {ECO:0000313|EMBL:KEL81292.1}; EC=3.1.-.- {ECO:0000313|EMBL:KEL81292.1};; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
Very short patch repair protein n=4 Tax=Citrobacter RepID=J0LXU2_9ENTR
very short patch repair endonuclease
L3_128_000G1_scaffold_223_6
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(6339..7259)
DNA (921bp) protein (307aa)
DMT superfamily transporter inner membrane protein n=1 Tax=Citrobacter freundii GTC 09479 RepID=M3CLY0_CITFR
Uncharacterized protein {ECO:0000313|EMBL:KEL81293.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
multidrug DMT transporter
L3_128_000G1_scaffold_223_7
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

7438..8349
DNA (912bp) protein (304aa)
Inner membrane protein yedI n=4 Tax=Citrobacter RepID=J0LRK2_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:KJC10392.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
hypothetical protein
L3_128_000G1_scaffold_223_8
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

8427..8612
DNA (186bp) protein (62aa)
Cytoplasmic protein n=6 Tax=Citrobacter RepID=J1FVI9_9ENTR
Uncharacterized protein {ECO:0000313|EMBL:CDL41748.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
hypothetical protein
L3_128_000G1_scaffold_223_9
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(8819..9046)
DNA (228bp) protein (76aa)
Cytoplasmic protein n=9 Tax=Citrobacter RepID=J0VJ00_9ENTR
hypothetical protein
Putative cytoplasmic protein {ECO:0000313|EMBL:CDL41747.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L3_128_000G1_scaffold_223_10
Citrobacter sp. KTE151, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

9210..9398
DNA (189bp) protein (63aa)
Protein DsrB n=7 Tax=Citrobacter RepID=G9SL28_CITFR
hypothetical protein
Protein DsrB {ECO:0000256|HAMAP-Rule:MF_01549, ECO:0000256|SAAS:SAAS00024808}; TaxID=1169322 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter sp. KTE151.;"
L3_128_000G1_scaffold_223_11
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(9453..10076)
DNA (624bp) protein (208aa)
Colanic acid capsular biosynthesis activation protein A n=7 Tax=Citrobacter RepID=C1M5Y6_9ENTR
Transcriptional regulatory protein RcsA {ECO:0000256|HAMAP-Rule:MF_00982}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
rcsA; capsule biosynthesis protein CapA
L3_128_000G1_scaffold_223_12
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(10365..11150)
DNA (786bp) protein (262aa)
Flagellar biosynthetic protein fliR n=3 Tax=Citrobacter RepID=K8QT25_CITFR
Flagellar biosynthetic protein fliR {ECO:0000256|RuleBase:RU003842}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
fliR; flagellar biosynthesis protein FliR
L3_128_000G1_scaffold_223_13
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11159..11428)
DNA (270bp) protein (90aa)
Flagellar biosynthetic protein FliQ n=10 Tax=Enterobacteriaceae RepID=G9SL25_CITFR
Flagellar biosynthesis protein FliQ {ECO:0000313|EMBL:CDL41742.1}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
fliQ; flagellar biosynthesis protein FliQ
L3_128_000G1_scaffold_223_14
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(11438..12175)
DNA (738bp) protein (246aa)
Flagellar biosynthetic protein FliP n=6 Tax=Citrobacter RepID=J0VJ05_9ENTR
Flagellar biosynthetic protein FliP {ECO:0000313|EMBL:KEL81301.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
fliP; flagellar biosynthesis protein flip
L3_128_000G1_scaffold_223_15
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12175..12549)
DNA (375bp) protein (125aa)
Flagellar biosynthesis protein FliO n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QPH8_CITFR
Flagellar biosynthesis protein FliO {ECO:0000313|EMBL:KJC10384.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
flagellar biosynthesis protein FliO
L3_128_000G1_scaffold_223_16
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12552..12965)
DNA (414bp) protein (138aa)
Flagellar motor switch protein FliN n=10 Tax=Citrobacter RepID=C1M5Y1_9ENTR
Flagellar motor switch protein FliN {ECO:0000313|EMBL:ETX69315.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
fliN; flagellar motor switch protein FliN
L3_128_000G1_scaffold_223_17
Citrobacter amalonaticus, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(12962..13966)
DNA (1005bp) protein (335aa)
Flagellar motor switch protein FliM n=11 Tax=Citrobacter RepID=C1M5Y0_9ENTR
Flagellar motor switch protein FliM {ECO:0000256|PIRNR:PIRNR002888}; TaxID=35703 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter.;" source="Citrobacter amalonaticus.;"
fliM; flagellar motor switch protein FliM
L3_128_000G1_scaffold_223_18
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(13971..14438)
DNA (468bp) protein (156aa)
Flagellar biosynthesis protein n=6 Tax=Citrobacter RepID=J1FVJ8_9ENTR
Flagellar basal body-associated FliL family protein {ECO:0000313|EMBL:KEL81305.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
fliL; flagellar basal body-associated protein FliL
L3_128_000G1_scaffold_223_19
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(14543..15757)
DNA (1215bp) protein (405aa)
Flagellar hook-length control protein n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QRJ3_CITFR
Flagellar hook-length control protein {ECO:0000313|EMBL:KEL81306.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
flagellar hook-length control protein
L3_128_000G1_scaffold_223_20
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(15754..16197)
DNA (444bp) protein (148aa)
Flagellar biosynthesis chaperone n=3 Tax=Citrobacter RepID=K8QPI3_CITFR
Flagellar FliJ protein {ECO:0000256|PIRNR:PIRNR019404}; TaxID=1439318 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii MGH 56.;"
fliJ; flagellar biosynthesis chaperone
L3_128_000G1_scaffold_223_21
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(16219..17589)
DNA (1371bp) protein (457aa)
ATP synthase {ECO:0000313|EMBL:KJC10378.1}; EC=3.6.3.14 {ECO:0000313|EMBL:KJC10378.1};; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
fliI; ATP synthase (EC:3.6.3.14)
Flagellum-specific ATP synthase n=6 Tax=Citrobacter RepID=C1M5X6_9ENTR
L3_128_000G1_scaffold_223_22
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(17589..18296)
DNA (708bp) protein (236aa)
Flagellar assembly protein H n=6 Tax=Citrobacter RepID=J0LRL1_9ENTR
Flagellar assembly FliH family protein {ECO:0000313|EMBL:KEL81309.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
fliH; flagellar assembly protein H
L3_128_000G1_scaffold_223_23
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(18289..19287)
DNA (999bp) protein (333aa)
Flagellar motor switch protein FliG n=9 Tax=Enterobacteriaceae RepID=C1M5X4_9ENTR
fliG; flagellar motor switch protein G
Flagellar motor switch protein FliG {ECO:0000256|PIRNR:PIRNR003161}; TaxID=1432557 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli ISC11.;"
L3_128_000G1_scaffold_223_24
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(19280..20953)
DNA (1674bp) protein (558aa)
Flagellar M-ring protein n=1 Tax=Citrobacter freundii GTC 09629 RepID=R1FJ68_CITFR
Flagellar M-ring protein {ECO:0000256|PIRNR:PIRNR004862}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
flagellar M-ring protein FliF
L3_128_000G1_scaffold_223_25
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

21170..21484
DNA (315bp) protein (105aa)
Flagellar hook-basal body complex protein FliE n=7 Tax=Citrobacter RepID=C1M5X1_9ENTR
Flagellar hook-basal body complex protein FliE {ECO:0000256|HAMAP-Rule:MF_00724, ECO:0000256|SAAS:SAAS00116622}; TaxID=1400137 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 32.;"
fliE; flagellar hook-basal body protein FliE
L3_128_000G1_scaffold_223_26
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21540..21773)
DNA (234bp) protein (78aa)
UPF0033 protein YedF n=1782 Tax=Enterobacteriaceae RepID=YEDF_ECO57
yedF; hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBG34916.1}; TaxID=216592 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli O44:H18 (strain 042 / EAEC).;"
L3_128_000G1_scaffold_223_27
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(21770..22975)
DNA (1206bp) protein (402aa)
Uncharacterized protein n=2 Tax=Citrobacter RepID=K8QXQ6_CITFR
Inner membrane protein {ECO:0000313|EMBL:ETX69302.1}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
hypothetical protein
L3_128_000G1_scaffold_223_28
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

23161..23574
DNA (414bp) protein (138aa)
Uncharacterized protein n=7 Tax=Citrobacter RepID=J1FVK7_9ENTR
Lipoprotein {ECO:0000313|EMBL:KJC08803.1}; TaxID=546 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii.;"
lipoprotein
L3_128_000G1_scaffold_223_29
Escherichia coli, Escherichia, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(23615..25102)
DNA (1488bp) protein (496aa)
cytoplasmic alpha-amylase (EC:3.2.1.1)
Cytoplasmic alpha-amylase n=1 Tax=Citrobacter freundii ATCC 8090 = MTCC 1658 RepID=K8QPJ0_CITFR
Alpha amylase, catalytic domain protein {ECO:0000313|EMBL:KEL81317.1}; TaxID=1444046 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Escherichia.;" source="Escherichia coli 5-172-05_S1_C1.;"
L3_128_000G1_scaffold_223_30
Citrobacter freundii, Citrobacter, Enterobacteriales, Gammaproteobacteria, Proteobacteria, Bacteria

Not on your lists

comp(25171..25542)
DNA (372bp) protein (124aa)
Flagellar protein FliT n=1 Tax=Citrobacter sp. KTE30 RepID=R8US18_9ENTR
Flagellar protein FliT {ECO:0000256|HAMAP-Rule:MF_01180, ECO:0000256|SAAS:SAAS00068921}; TaxID=1400136 species="Bacteria; Proteobacteria; Gammaproteobacteria; Enterobacteriales; Enterobacteriaceae; Citrobacter; Citrobacter freundii complex.;" source="Citrobacter freundii UCI 31.;"
flagellar biosynthesis protein FliT
Displaying items 1-30 of 95 in total

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