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L3_128_000G1_scaffold_224

Search features with annotation key words

Displaying items 1-30 of 99 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_224_1
Cyanobacterium aponinum, Cyanobacterium, Chroococcales, Oscillatoriophycideae, Cyanobacteria, Bacteria

Not on your lists

comp(203..505)
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Cyanobacterium aponinum (strain PCC 10605) RepID=K9Z890_CYAAP
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFZ54947.1}; TaxID=755178 species="Bacteria; Cyanobacteria; Oscillatoriophycideae; Chroococcales; Cyanobacterium.;" source="Cyanobacterium aponinum (strain PCC 10605).;"
L3_128_000G1_scaffold_224_2
Clostridium intestinale, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(623..2095)
DNA (1473bp) protein (491aa)
beta-glucosidase/6-phospho-beta-glucosidase/beta-galactosidase (EC:3.2.1.86)
6-phospho-beta-glucosidase n=1 Tax=Clostridium intestinale URNW RepID=U2PXX3_9CLOT
6-phospho-beta-glucosidase {ECO:0000313|EMBL:ERK31325.1}; TaxID=1294142 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium intestinale URNW.;"
L3_128_000G1_scaffold_224_3
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(2183..2491)
DNA (309bp) protein (103aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GF45_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03324.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
Nitrous oxide-stimulated promoter.
L3_128_000G1_scaffold_224_4
[Clostridium] methylpentosum, Ruminiclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2488..4143)
DNA (1656bp) protein (552aa)
Thiol reductant ABC exporter, CydC subunit n=1 Tax=Clostridium methylpentosum DSM 5476 RepID=C0EDF1_9CLOT
Thiol reductant ABC exporter, CydC subunit {ECO:0000313|EMBL:EEG30537.1}; TaxID=537013 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Ruminiclostridium.;" source="[Clostridium] methylpentosum DSM 5476.;"
hypothetical protein
L3_128_000G1_scaffold_224_5
Coprobacillus sp. 3_3_56FAA, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(4136..5869)
DNA (1734bp) protein (578aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 3_3_56FAA RepID=G9QWU6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHM94184.1}; TaxID=665941 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 3_3_56FAA.;"
ABC transporter-like protein
L3_128_000G1_scaffold_224_6
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5862..6350)
DNA (489bp) protein (163aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GER0_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37740.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_128_000G1_scaffold_224_7
Clostridium argentinense, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6439..8439)
DNA (2001bp) protein (667aa)
hypothetical protein n=1 Tax=Clostridiaceae bacterium JC13 RepID=UPI0002D7F6DC
Ferrous iron transport protein B {ECO:0000313|EMBL:KIE48060.1}; TaxID=1418104 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium argentinense CDC 2741.;"
feoB-2; ferrous iron transport protein B
L3_128_000G1_scaffold_224_8
Clostridium sp. CAG:678, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8487..8705)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Clostridium sp. CAG:678 RepID=R5KVR4_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CCY69199.1}; TaxID=1262831 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:678.;"
feoA3; Ferrous iron transport protein A
L3_128_000G1_scaffold_224_9
Eubacterium limosum, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8708..8926)
DNA (219bp) protein (73aa)
Uncharacterized protein n=1 Tax=Eubacterium limosum (strain KIST612) RepID=E3GEQ6_EUBLK
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:ADO37736.1}; TaxID=903814 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium.;" source="Eubacterium limosum (strain KIST612).;"
L3_128_000G1_scaffold_224_10
Clostridium saccharoperbutylacetonicum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9049..9849)
DNA (801bp) protein (267aa)
HAD-superfamily hydrolase, subfamily IIB n=1 Tax=Clostridium saccharoperbutylacetonicum N1-4(HMT) RepID=M1LTD3_9CLOT
HAD-superfamily hydrolase, subfamily IIB
HAD-superfamily hydrolase, subfamily IIB {ECO:0000313|EMBL:AGF56265.1}; TaxID=931276 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium saccharoperbutylacetonicum N1-4(HMT).;"
L3_128_000G1_scaffold_224_11
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

9956..10792
DNA (837bp) protein (279aa)
Transcriptional regulator, AraC family n=3 Tax=Erysipelotrichaceae RepID=B0N7U0_9FIRM
Transcriptional regulator, AraC family {ECO:0000313|EMBL:EDS17878.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
AraC family transcriptional regulator
L3_128_000G1_scaffold_224_12
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11058..11408
DNA (351bp) protein (117aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RI68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34947.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
alpha amylase catalytic subunit
L3_128_000G1_scaffold_224_13
Coprobacillus sp. CAG:183, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

11436..12500
DNA (1065bp) protein (355aa)
Uncharacterized protein n=3 Tax=Coprobacillus RepID=C3RI68_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CCZ34947.1}; TaxID=1262853 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus; environmental samples.;" source="Coprobacillus sp. CAG:183.;"
glycosidase
L3_128_000G1_scaffold_224_14
Clostridium sp. ATCC 29733, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12564..13055)
DNA (492bp) protein (164aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=1507 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. (strain ATCC 29733 / VPI C48-50).;"
methylthioadenosine nucleosidase (EC:3.2.2.9 3.2.2.16)
MTA/SAH nucleosidase n=1 Tax=Clostridium sp. (strain ATCC 29733 / VPI C48-50) RepID=U2DDE7_CLOS4
L3_128_000G1_scaffold_224_15
Fusobacterium ulcerans, Fusobacterium, Fusobacteriales, Fusobacteriia, Fusobacteria, Bacteria

Not on your lists

comp(13077..13262)
DNA (186bp) protein (62aa)
5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 2 {ECO:0000256|SAAS:SAAS00035188}; EC=3.2.2.9 {ECO:0000256|SAAS:SAAS00035196};; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase {ECO:0000256|SAAS:SAAS00035261}; 5'-methylthioadenosine/S-adenosylhomocysteine nucleosidase 1 {ECO:0000256|SAAS:SAAS00035231}; TaxID=457404 species="Bacteria; Fusobacteria; Fusobacteriales; Fusobacteriaceae; Fusobacterium.;" source="Fusobacterium ulcerans 12-1B.;"
methylthioadenosine nucleosidase (EC:3.2.2.9 3.2.2.16)
MTA/SAH nucleosidase n=1 Tax=Fusobacterium ulcerans 12-1B RepID=H1PUT3_9FUSO
L3_128_000G1_scaffold_224_16
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13322..14380)
DNA (1059bp) protein (353aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G747_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06125.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_128_000G1_scaffold_224_17
Catenibacterium sp. CAG:290, Catenibacterium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(14432..15232)
DNA (801bp) protein (267aa)
Cof-like hydrolase n=1 Tax=Catenibacterium sp. CAG:290 RepID=R7GL92_9FIRM
Cof-like hydrolase {ECO:0000313|EMBL:CDE27855.1}; TaxID=1262767 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Catenibacterium; environmental samples.;" source="Catenibacterium sp. CAG:290.;"
HAD-superfamily hydrolase
L3_128_000G1_scaffold_224_18
Eggerthia catenaformis, Eggerthia, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(15397..17025)
DNA (1629bp) protein (543aa)
Uncharacterized protein n=1 Tax=Eggerthia catenaformis OT 569 = DSM 20559 RepID=M2P7Y0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EMD16432.1}; TaxID=999415 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Eggerthia.;" source="Eggerthia catenaformis OT 569 = DSM 20559.;"
putative manganase-dependent inorganic pyrophosphatase
L3_128_000G1_scaffold_224_19
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17028..17702)
DNA (675bp) protein (225aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7GDU2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW03745.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_128_000G1_scaffold_224_20
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17948..18619)
DNA (672bp) protein (224aa)
Uncharacterized protein n=1 Tax=Coprobacillus sp. 29_1 RepID=E7G6N7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06193.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
hypothetical protein
L3_128_000G1_scaffold_224_21
Thermoanaerobacter ethanolicus, Thermoanaerobacter, Thermoanaerobacterales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(18727..19731)
DNA (1005bp) protein (335aa)
Putative uncharacterized protein n=1 Tax=Thermoanaerobacter ethanolicus JW 200 RepID=F1ZVJ2_THEET
Putative uncharacterized protein {ECO:0000313|EMBL:EGD51796.1}; TaxID=509192 species="Bacteria; Firmicutes; Clostridia; Thermoanaerobacterales; Thermoanaerobacteraceae; Thermoanaerobacter.;" source="Thermoanaerobacter ethanolicus JW 200.;"
hypothetical protein
L3_128_000G1_scaffold_224_22
Terrisporobacter othiniensis, Terrisporobacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19724..20050)
DNA (327bp) protein (109aa)
PadR family transcriptional regulator n=1 Tax=Bacillus infantis NRRL B-14911 RepID=U5L7G2_9BACI
PadR family transcriptional regulator {ECO:0000313|EMBL:KHS56807.1}; TaxID=1577792 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Terrisporobacter.;" source="Terrisporobacter othiniensis.;"
PadR family transcriptional regulator
L3_128_000G1_scaffold_224_23
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(20062..21786)
DNA (1725bp) protein (575aa)
ABC transporter related n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TAX5_9STAP
ABC transporter related {ECO:0000313|EMBL:CDC70528.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
ABC transporter related
L3_128_000G1_scaffold_224_24
Staphylococcus sp. CAG:324, Tenericutes, Bacteria

Not on your lists

comp(21783..23570)
DNA (1788bp) protein (596aa)
ABC transporter related n=1 Tax=Staphylococcus sp. CAG:324 RepID=R6TRN2_9STAP
ABC transporter related {ECO:0000313|EMBL:CDC70531.1}; TaxID=1262969 species="Bacteria; Firmicutes; Bacilli; Bacillales; Staphylococcus; environmental samples.;" source="Staphylococcus sp. CAG:324.;"
ABC transporter
L3_128_000G1_scaffold_224_25
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

23707..25572
DNA (1866bp) protein (622aa)
Uncharacterized protein n=2 Tax=Coprobacillus RepID=E7G6N4_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EFW06190.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
ABC transporter
L3_128_000G1_scaffold_224_26
Methanolobus tindarius, Methanolobus, Methanosarcinales, Methanomicrobia, Euryarchaeota, Archaea

Not on your lists

comp(25606..26448)
DNA (843bp) protein (281aa)
UPI0003D1B263 related cluster n=1 Tax=unknown RepID=UPI0003D1B263
Uncharacterized protein {ECO:0000313|EMBL:ETA68827.1}; TaxID=1090322 species="Archaea; Euryarchaeota; Methanomicrobia; Methanosarcinales; Methanosarcinaceae; Methanolobus.;" source="Methanolobus tindarius DSM 2278.;"
hypothetical protein
L3_128_000G1_scaffold_224_27
Coprobacillus sp. 29_1, Coprobacillus, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

26669..27853
DNA (1185bp) protein (395aa)
hypothetical protein n=1 Tax=Coprobacillus sp. D6 RepID=UPI0002E0C902
Uncharacterized protein {ECO:0000313|EMBL:EFW03142.1}; TaxID=469596 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Coprobacillus.;" source="Coprobacillus sp. 29_1.;"
maltose MFS-type transporter
L3_128_000G1_scaffold_224_28
Erysipelatoclostridium ramosum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(28205..28669)
DNA (465bp) protein (155aa)
Copper/zinc superoxide dismutase n=2 Tax=Erysipelotrichaceae RepID=B0N4K5_9FIRM
Copper/zinc superoxide dismutase {ECO:0000313|EMBL:EDS18607.1}; TaxID=445974 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="Erysipelatoclostridium ramosum DSM 1402.;"
hypothetical protein
L3_128_000G1_scaffold_224_29
Clostridium sp. CAG:571, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(28719..30131)
DNA (1413bp) protein (471aa)
Iron-sulfur cluster-binding protein rieske family n=1 Tax=Clostridium sp. CAG:571 RepID=R5XLD2_9CLOT
Iron-sulfur cluster-binding protein rieske family {ECO:0000313|EMBL:CDA15660.1}; TaxID=1262822 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:571.;"
Rieske family iron-sulfur cluster-binding protein
L3_128_000G1_scaffold_224_30
Clostridium sp. CAG:710, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(30175..30696)
DNA (522bp) protein (174aa)
large-conductance mechanosensitive channel n=1 Tax=Clostridium sp. JC122 RepID=UPI00028984BE
Large-conductance mechanosensitive channel {ECO:0000256|HAMAP-Rule:MF_00115, ECO:0000256|SAAS:SAAS00023935}; TaxID=1262833 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium sp. CAG:710.;"
mscL; large-conductance mechanosensitive channel
Displaying items 1-30 of 99 in total

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