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L3_128_000G1_scaffold_260

Search features with annotation key words

Displaying items 1-30 of 64 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_260_1
unknown

Not on your lists

3..104
DNA (102bp) protein (34aa)

This feature has no annotations

L3_128_000G1_scaffold_260_2
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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679..1293
DNA (615bp) protein (205aa)
Lipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112541}; EC=3.4.23.36 {ECO:0000256|HAMAP-Rule:MF_00161, ECO:0000256|SAAS:SAAS00112508};; Prolipoprotein signal peptidase {ECO:0000256|HAMAP-Rule:MF_00161}; Signal peptidase II {ECO:0000256|HAMAP-Rule:MF_00161}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
Lipoprotein signal peptidase n=1 Tax=Alistipes sp. CAG:29 RepID=R6XVT0_9BACT
lipoprotein signal peptidase
L3_128_000G1_scaffold_260_3
unknown

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2205..2348
DNA (144bp) protein (48aa)

This feature has no annotations

L3_128_000G1_scaffold_260_4
Bizionia argentinensis, Bizionia, Flavobacteriales, Flavobacteriia, Bacteroidetes, Bacteria

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comp(2875..3366)
DNA (492bp) protein (164aa)
Peptidase S24-like family protein n=1 Tax=Bizionia argentinensis JUB59 RepID=G2EB63_9FLAO
Peptidase S24-like family protein {ECO:0000313|EMBL:EGV44238.1}; TaxID=1046627 species="Bacteria; Bacteroidetes; Flavobacteriia; Flavobacteriales; Flavobacteriaceae; Bizionia.;" source="Bizionia argentinensis JUB59.;"
hypothetical protein
L3_128_000G1_scaffold_260_5
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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3698..4030
DNA (333bp) protein (111aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YML8_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78236.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_128_000G1_scaffold_260_6
Alistipes sp. HGB5, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4130..4432
DNA (303bp) protein (101aa)
Uncharacterized protein n=1 Tax=Alistipes sp. HGB5 RepID=E4M9T6_9BACT
Uncharacterized protein {ECO:0000313|EMBL:EFR58295.1}; TaxID=908612 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes sp. HGB5.;"
Initiator Replication protein
L3_128_000G1_scaffold_260_7
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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4630..5181
DNA (552bp) protein (184aa)
Initiator Replication protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YML7_ALIFI
Initiator Replication protein
Initiator Replication protein {ECO:0000313|EMBL:AFL78235.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_128_000G1_scaffold_260_8
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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5178..5708
DNA (531bp) protein (177aa)
Uncharacterized protein n=1 Tax=Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG 46020 / CIP 107999) RepID=I3YMK1_ALIFI
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78219.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_128_000G1_scaffold_260_9
Alistipes finegoldii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

6027..6590
DNA (564bp) protein (188aa)
recombinase XerD n=2 Tax=Alistipes RepID=UPI0002EDC7E7
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AFL78717.1}; TaxID=679935 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes finegoldii (strain DSM 17242 / JCM 16770 / AHN 2437 / CCUG; 46020 / CIP 107999).;"
L3_128_000G1_scaffold_260_10
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

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comp(6563..7486)
DNA (924bp) protein (308aa)
major facilitator transporter n=1 Tax=Alistipes onderdonkii RepID=UPI00036FD3F5
Major Facilitator Superfamily.
Major Facilitator Superfamily {ECO:0000313|EMBL:CBK64291.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_128_000G1_scaffold_260_11
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(7487..7828)
DNA (342bp) protein (114aa)
major facilitator transporter n=1 Tax=Bacteroidales bacterium ph8 RepID=UPI00037943FB
Major Facilitator Superfamily.
Major Facilitator Superfamily {ECO:0000313|EMBL:CBK64291.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_128_000G1_scaffold_260_12
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(8240..10189)
DNA (1950bp) protein (650aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5W1V1_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCZ97088.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
L3_128_000G1_scaffold_260_13
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(10322..12295)
DNA (1974bp) protein (658aa)
Putative uncharacterized protein n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ34_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CBK65046.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
Glycosyl hydrolases family 18./Domain of unknown function (DUF1735).
L3_128_000G1_scaffold_260_14
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(12369..13664)
DNA (1296bp) protein (432aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5W381_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97090.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
Domain of unknown function (DUF1735).
L3_128_000G1_scaffold_260_15
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(13654..14685)
DNA (1032bp) protein (344aa)
Uncharacterized protein n=2 Tax=Alistipes RepID=R5WMH8_9BACT
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CBK65048.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_128_000G1_scaffold_260_16
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(14724..16367)
DNA (1644bp) protein (548aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5WX67_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CCZ97092.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
hypothetical protein
L3_128_000G1_scaffold_260_17
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(16380..19751)
DNA (3372bp) protein (1124aa)
SusC/RagA family TonB-linked outer membrane protein n=1 Tax=Alistipes sp. CAG:53 RepID=R5W1V5_9BACT
SusC/RagA family TonB-linked outer membrane protein {ECO:0000313|EMBL:CCZ97093.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
SusC/RagA family TonB-linked outer membrane protein
L3_128_000G1_scaffold_260_18
Alistipes shahii, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(19894..20847)
DNA (954bp) protein (318aa)
Fe2+-dicitrate sensor, membrane component n=1 Tax=Alistipes shahii WAL 8301 RepID=D4IQ38_9BACT
Fe2+-dicitrate sensor, membrane component
Fe2+-dicitrate sensor, membrane component {ECO:0000313|EMBL:CBK65050.1}; TaxID=717959 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes.;" source="Alistipes shahii WAL 8301.;"
L3_128_000G1_scaffold_260_19
Alistipes sp. CAG:53, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(20961..21548)
DNA (588bp) protein (196aa)
RNA polymerase sigma factor sigma-70 family/RNA polymerase sigma-70 factor Bacteroides expansion family 1 n=1 Tax=Alistipes sp. CAG:53 RepID=R5W385_9BACT
RNA polymerase sigma factor sigma-70 family/RNA polymerase sigma-70 factor Bacteroides expansion family 1 {ECO:0000313|EMBL:CCZ97095.1}; TaxID=1262697 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:53.;"
RNA polymerase sigma factor, sigma-70 family/RNA polymerase sigma-70 factor, Bacteroides expansion family 1
L3_128_000G1_scaffold_260_20
unknown

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comp(21869..22378)
DNA (510bp) protein (170aa)

This feature has no annotations

L3_128_000G1_scaffold_260_21
unknown

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22619..23254
DNA (636bp) protein (212aa)

This feature has no annotations

L3_128_000G1_scaffold_260_22
unknown

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23297..23929
DNA (633bp) protein (211aa)

This feature has no annotations

L3_128_000G1_scaffold_260_23
Parabacteroides goldsteinii, Parabacteroides, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

23992..24483
DNA (492bp) protein (164aa)
hypothetical protein, partial n=1 Tax=Alistipes onderdonkii RepID=UPI000368FD28
Uncharacterized protein {ECO:0000313|EMBL:EKN13076.1}; TaxID=999418 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Porphyromonadaceae; Parabacteroides.;" source="Parabacteroides goldsteinii CL02T12C30.;"
hypothetical protein
L3_128_000G1_scaffold_260_24
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(25371..28961)
DNA (3591bp) protein (1197aa)
Uncharacterized protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XNI5_9BACT
Uncharacterized protein {ECO:0000313|EMBL:CDD25223.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
putative glycosylhydrolase
L3_128_000G1_scaffold_260_25
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

comp(29286..31556)
DNA (2271bp) protein (757aa)
Penicillin-binding protein 1C n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1S8_9BACT
Penicillin-binding protein 1C {ECO:0000313|EMBL:CDD25224.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
penicillin-binding protein 1C
L3_128_000G1_scaffold_260_26
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

31641..36893
DNA (5253bp) protein (1751aa)
Alpha-2-macroglobulin family protein n=1 Tax=Alistipes sp. CAG:29 RepID=R6XU86_9BACT
Alpha-2-macroglobulin family protein {ECO:0000313|EMBL:CDD25225.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
large extracellular alpha-helical protein
L3_128_000G1_scaffold_260_27
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

37131..38651
DNA (1521bp) protein (507aa)
2-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00049060}; EC=2.3.3.13 {ECO:0000256|HAMAP-Rule:MF_01025, ECO:0000256|SAAS:SAAS00085331};; Alpha-IPM synthase {ECO:0000256|HAMAP-Rule:MF_01025}; Alpha-isopropylmalate synthase {ECO:0000256|HAMAP-Rule:MF_01025}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
2-isopropylmalate synthase (EC:2.3.3.13)
2-isopropylmalate synthase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y994_9BACT
L3_128_000G1_scaffold_260_28
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

38653..40029
DNA (1377bp) protein (459aa)
3-isopropylmalate dehydratase large subunit {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091369}; EC=4.2.1.33 {ECO:0000256|HAMAP-Rule:MF_01026, ECO:0000256|SAAS:SAAS00091399};; Alpha-IPM isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; Isopropylmalate isomerase {ECO:0000256|HAMAP-Rule:MF_01026}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
3-isopropylmalate dehydratase large subunit n=1 Tax=Alistipes sp. CAG:29 RepID=R6Z403_9BACT
3-isopropylmalate dehydratase large subunit
L3_128_000G1_scaffold_260_29
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40188..40781
DNA (594bp) protein (198aa)
3-isopropylmalate dehydratase {ECO:0000256|SAAS:SAAS00089872}; EC=4.2.1.33 {ECO:0000256|SAAS:SAAS00089872};; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
3-isopropylmalate dehydratase small subunit n=1 Tax=Alistipes onderdonkii RepID=UPI0003607B45
3-isopropylmalate dehydratase small subunit
L3_128_000G1_scaffold_260_30
Alistipes sp. CAG:29, Alistipes, Bacteroidales, Bacteroidia, Bacteroidetes, Bacteria

Not on your lists

40810..42330
DNA (1521bp) protein (507aa)
Isopropylmalate/homocitrate/citramalate synthase n=1 Tax=Alistipes sp. CAG:29 RepID=R6Y1T1_9BACT
Isopropylmalate/homocitrate/citramalate synthase {ECO:0000313|EMBL:CDD25229.1}; TaxID=1262694 species="Bacteria; Bacteroidetes; Bacteroidia; Bacteroidales; Rikenellaceae; Alistipes; environmental samples.;" source="Alistipes sp. CAG:29.;"
isopropylmalate/homocitrate/citramalate synthase
Displaying items 1-30 of 64 in total

View Taxonomy