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L3_128_000G1_scaffold_293

Search features with annotation key words

Displaying items 1-30 of 78 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_293_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(432..836)
DNA (405bp) protein (135aa)
30S ribosomal protein S9 n=7 Tax=Firmicutes RepID=E4LY04_9CLOT
30S ribosomal protein S9 {ECO:0000256|HAMAP-Rule:MF_00532, ECO:0000256|RuleBase:RU003816}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
SSU ribosomal protein S9P
L3_128_000G1_scaffold_293_2
Erysipelotrichaceae bacterium CAG:64, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists


comp(849..1286)
DNA (438bp) protein (146aa)
50S ribosomal protein L13 n=6 Tax=Firmicutes RepID=G1VSL3_9FIRM
50S ribosomal protein L13 {ECO:0000256|HAMAP-Rule:MF_01366, ECO:0000256|SAAS:SAAS00083943}; TaxID=1262981 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; environmental samples.;" source="Erysipelotrichaceae bacterium CAG:64.;"
LSU ribosomal protein L13P
L3_128_000G1_scaffold_293_3
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(1772..2635)
DNA (864bp) protein (288aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=G1VSL2_9FIRM
DegV family EDD domain-containing protein {ECO:0000313|EMBL:ENY87625.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_128_000G1_scaffold_293_4
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2813..4672)
DNA (1860bp) protein (620aa)
ABC transporter, ATP-binding protein n=4 Tax=Firmicutes RepID=E4LY06_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR36294.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC-type multidrug transport system, ATPase and permease components
L3_128_000G1_scaffold_293_5
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(4672..6396)
DNA (1725bp) protein (575aa)
ABC transporter, ATP-binding protein n=4 Tax=Firmicutes RepID=E4LY07_9CLOT
ABC transporter, ATP-binding protein {ECO:0000313|EMBL:EFR36369.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
ABC-type multidrug transport system, ATPase and permease components
L3_128_000G1_scaffold_293_6
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(6428..6856)
DNA (429bp) protein (143aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae RepID=G1VSK9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ENY87628.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
Transcriptional regulators
L3_128_000G1_scaffold_293_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8048..10051)
DNA (2004bp) protein (668aa)
Efflux ABC transporter, permease protein n=5 Tax=Firmicutes RepID=E4LY10_9CLOT
FtsX-like permease family protein {ECO:0000313|EMBL:EQJ54436.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
ftsX-like permease family protein
L3_128_000G1_scaffold_293_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10401..10700)
DNA (300bp) protein (100aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LY12_9CLOT
YCII-related domain protein {ECO:0000313|EMBL:EQJ54438.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_128_000G1_scaffold_293_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10795..10962)
DNA (168bp) protein (56aa)
Uncharacterized protein n=2 Tax=unclassified Erysipelotrichaceae (miscellaneous) RepID=H1B114_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54439.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_293_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11196..11450)
DNA (255bp) protein (85aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6Y9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54440.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_293_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11639..12100)
DNA (462bp) protein (154aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B115_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54442.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_293_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12182..12793)
DNA (612bp) protein (204aa)
VanW-like protein n=4 Tax=Firmicutes RepID=E4LY15_9CLOT
VanW like family protein {ECO:0000313|EMBL:EQJ54443.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_293_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12836..13021)
DNA (186bp) protein (62aa)
Uncharacterized protein n=5 Tax=Firmicutes RepID=H1B116_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54444.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
vancomycin B-type resistance protein VanW
L3_128_000G1_scaffold_293_14
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(13097..13438)
DNA (342bp) protein (114aa)
Uncharacterized protein n=7 Tax=Firmicutes RepID=E4LY17_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87635.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_128_000G1_scaffold_293_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13940..17221)
DNA (3282bp) protein (1094aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6Y3_9FIRM
SMC s Flexible Hinge domain protein {ECO:0000313|EMBL:EQJ54447.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
SMC domain-containing protein
L3_128_000G1_scaffold_293_16
Clostridium sp. HGF2, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(17172..17840)
DNA (669bp) protein (223aa)
Uncharacterized protein n=3 Tax=Firmicutes RepID=E4LY20_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:EFR36264.1}; TaxID=908340 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. HGF2.;"
L3_128_000G1_scaffold_293_17
[Clostridium] innocuum, Erysipelatoclostridium, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(17837..19261)
DNA (1425bp) protein (475aa)
Uncharacterized protein n=6 Tax=Firmicutes RepID=E4LY21_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ENY87639.1}; TaxID=999413 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae; Erysipelatoclostridium.;" source="[Clostridium] innocuum 2959.;"
hypothetical protein
L3_128_000G1_scaffold_293_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(19573..22821)
DNA (3249bp) protein (1083aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6Y0_9FIRM
FtsX-like permease family protein {ECO:0000313|EMBL:EQJ54450.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_293_19
Erysipelotrichaceae bacterium 2_2_44A, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(22823..23527)
DNA (705bp) protein (235aa)
ABC transporter, ATP-binding protein n=8 Tax=Firmicutes RepID=E2SL46_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGX73928.1}; TaxID=457422 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 2_2_44A.;"
hypothetical protein
L3_128_000G1_scaffold_293_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23840..24172
DNA (333bp) protein (111aa)
Transcriptional regulator, PadR family n=4 Tax=Firmicutes RepID=E4LY24_9CLOT
Transcriptional regulator PadR-like family protein {ECO:0000313|EMBL:EQJ54453.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
transcriptional regulator, PadR family
L3_128_000G1_scaffold_293_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24162..24842
DNA (681bp) protein (227aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6X7_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54454.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
L3_128_000G1_scaffold_293_22
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

24839..25615
DNA (777bp) protein (259aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6X6_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31347.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
pentapeptide repeat-containing protein
L3_128_000G1_scaffold_293_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25834..26517)
DNA (684bp) protein (228aa)
Uncharacterized protein n=1 Tax=Erysipelotrichaceae bacterium CAG:64 RepID=R6U934_9FIRM
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQJ54457.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L3_128_000G1_scaffold_293_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(26557..27852)
DNA (1296bp) protein (432aa)
Diguanylate cyclase domain protein n=2 Tax=Firmicutes RepID=T4NGR6_CLODI
Diguanylate cyclase domain protein {ECO:0000313|EMBL:EQJ54457.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
PAS/PAC sensor-containing diguanylate cyclase/phosphodiesterase
L3_128_000G1_scaffold_293_25
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(27815..28036)
DNA (222bp) protein (74aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6X3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31344.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_128_000G1_scaffold_293_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28263..30230
DNA (1968bp) protein (656aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6X2_9FIRM
Penicillin binding transpeptidase domain protein {ECO:0000313|EMBL:EQJ54459.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
penicillin-binding protein 2
L3_128_000G1_scaffold_293_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

30369..30734
DNA (366bp) protein (122aa)
Lactoylglutathione lyase and related lyases (EC:4.4.1.5)
Glyoxalase family protein n=4 Tax=Firmicutes RepID=E4LY30_9CLOT
Glyoxalase/Bleomycin resistance /Dioxygenase superfamily protein {ECO:0000313|EMBL:EQJ54460.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
L3_128_000G1_scaffold_293_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(31382..32779)
DNA (1398bp) protein (466aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6X0_9FIRM
Gram-positive signal peptide protein, YSIRK family {ECO:0000313|EMBL:EQJ54463.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
roundabout, axon guidance receptor 3
L3_128_000G1_scaffold_293_29
Erysipelotrichaceae bacterium 6_1_45, Erysipelotrichales, Erysipelotrichia, Firmicutes, Bacteria

Not on your lists

comp(33119..33250)
DNA (132bp) protein (44aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6W9_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EHO31340.1}; TaxID=469614 species="Bacteria; Firmicutes; Erysipelotrichia; Erysipelotrichales; Erysipelotrichaceae.;" source="Erysipelotrichaceae bacterium 6_1_45.;"
L3_128_000G1_scaffold_293_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33620..35353
DNA (1734bp) protein (578aa)
Uncharacterized protein n=2 Tax=Firmicutes RepID=H1B6W8_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EQJ54467.1}; TaxID=1151410 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile P28.;"
hypothetical protein
Displaying items 1-30 of 78 in total

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