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L3_128_000G1_scaffold_377

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Displaying items 1-30 of 189 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_377_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2..262
DNA (261bp) protein (87aa)
Peptidase M20/M25/M40 family protein n=15 Tax=Clostridium difficile RepID=T3JQR5_CLODI
peptidase
Peptidase M20/M25/M40 family protein {ECO:0000313|EMBL:EQH99722.1}; Flags: Fragment;; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_128_000G1_scaffold_377_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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395..1765
DNA (1371bp) protein (457aa)
D-hydantoinase (Dihydropyrimidinase) {ECO:0000313|EMBL:CCL30296.1}; EC=3.5.2.2 {ECO:0000313|EMBL:CCL30296.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
D-hydantoinase (EC:3.5.2.2)
Dihydropyrimidinase n=2 Tax=Clostridium difficile RepID=T4PL21_CLODI
L3_128_000G1_scaffold_377_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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1765..3189
DNA (1425bp) protein (475aa)
Amidohydrolase family protein n=8 Tax=Clostridium difficile RepID=G6B950_CLODI
amidohydrolase
Probable amidohydrolase {ECO:0000313|EMBL:CBE04962.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_128_000G1_scaffold_377_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3240..3707
DNA (468bp) protein (156aa)
Xanthine dehydrogenase iron-sulfur binding subunit n=5 Tax=Clostridium difficile RepID=C9XJU6_CLODC
xdhC; xanthine dehydrogenase iron-sulfur binding subunit
2Fe-2S iron-sulfur cluster-binding domain protein {ECO:0000313|EMBL:EHJ29506.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_128_000G1_scaffold_377_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3746..4540
DNA (795bp) protein (265aa)
putative FAD-binding subunit of xanthinedehydrogenase (EC:1.17.1.4)
FAD binding domain in molybdopterin dehydrogenase family protein n=84 Tax=Clostridium difficile RepID=T3GK16_CLODC
FAD binding domain in molybdopterin dehydrogenase {ECO:0000313|EMBL:EHJ29505.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_128_000G1_scaffold_377_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4530..6821
DNA (2292bp) protein (764aa)
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:CCL22356.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CCL22356.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Xanthine dehydrogenase, molybdenum binding subunit n=41 Tax=Clostridium difficile RepID=U4CEQ0_CLODI
xdhA2; xanthine dehydrogenase, molybdenum binding subunit
L3_128_000G1_scaffold_377_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6822..8135
DNA (1314bp) protein (438aa)
putative S-adenosylhomocysteine deaminase (EC:3.5.4.28)
Amidohydrolase family protein n=125 Tax=Clostridium difficile RepID=T3GP23_CLODC
Amidohydrolase family protein {ECO:0000313|EMBL:EQH99714.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_128_000G1_scaffold_377_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8171..9256
DNA (1086bp) protein (362aa)
Dihydroorotate dehydrogenase, catalytic subunit {ECO:0000313|EMBL:CCK98433.1}; EC=1.3.98.1 {ECO:0000313|EMBL:CCK98433.1};; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
Dihydroorotate dehydrogenase family domain protein n=22 Tax=Clostridium difficile RepID=T2TJW1_CLODI
pyrD; dihydroorotate dehydrogenase, catalytic subunit
L3_128_000G1_scaffold_377_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9492..10577
DNA (1086bp) protein (362aa)
Uncharacterized protein n=4 Tax=Clostridium difficile RepID=Q188E4_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CAJ68961.1}; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
L3_128_000G1_scaffold_377_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

11924..13282
DNA (1359bp) protein (453aa)
Permease family protein n=154 Tax=Clostridium difficile RepID=T3GP44_CLODC
pbuX; putative xanthine permease
Putative xanthine permease {ECO:0000313|EMBL:CCL22352.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_128_000G1_scaffold_377_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13389..14183
DNA (795bp) protein (265aa)
FAD binding domain in molybdopterin dehydrogenase family protein n=2 Tax=Clostridium difficile RepID=T4PL10_CLODI
xanthine dehydrogenase FAD-binding subunit
Putative FAD-binding subunit of xanthine dehydrogenase {ECO:0000313|EMBL:CCL22351.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_128_000G1_scaffold_377_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14176..16482
DNA (2307bp) protein (769aa)
Xanthine dehydrogenase, molybdenum binding subunit {ECO:0000313|EMBL:CCL22350.1}; EC=1.17.1.4 {ECO:0000313|EMBL:CCL22350.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
xdhA; Xanthine dehydrogenase, molybdenum bindingsubunit (EC:1.17.1.4)
Aldehyde oxidase and xanthine dehydrogenase, molybdopterin binding domain protein n=93 Tax=Clostridium difficile RepID=G6BRJ3_CLODI
L3_128_000G1_scaffold_377_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16585..17898
DNA (1314bp) protein (438aa)
Transposase, IS605 OrfB family n=142 Tax=Clostridium difficile RepID=G6BRJ4_CLODI
transposase
Putative transposase {ECO:0000313|EMBL:CBE04944.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_128_000G1_scaffold_377_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18081..18803
DNA (723bp) protein (241aa)
Uncharacterized protein n=57 Tax=Clostridium difficile RepID=C9XJT6_CLODC
hypothetical protein
Putative selenium-dependent hydroxylase accessory protein YqeC {ECO:0000313|EMBL:EQE63220.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_128_000G1_scaffold_377_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18910..19479
DNA (570bp) protein (190aa)
Molybdenum hydroxylase accessory protein, YgfJ family n=167 Tax=Clostridium difficile RepID=G6BRJ6_CLODI
molybdopterin-guanine dinucleotide biosynthesis protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30282.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_128_000G1_scaffold_377_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19476..20495
DNA (1020bp) protein (340aa)
Molybdopterin binding domain protein n=189 Tax=Clostridium difficile RepID=G6BRJ7_CLODI
molybdopterin biosynthesis protein
Putative molybdopterin binding domain protein {ECO:0000313|EMBL:EQH99705.1}; TaxID=1151372 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile F501.;"
L3_128_000G1_scaffold_377_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20833..22458
DNA (1626bp) protein (542aa)
ABC-type transport system, ATP-binding protein {ECO:0000313|EMBL:CCL22344.1}; EC=3.6.3.- {ECO:0000313|EMBL:CCL22344.1};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
ABC transporter family protein n=157 Tax=Clostridium difficile RepID=C9XJT3_CLODC
ABC transporter ATP-binding protein
L3_128_000G1_scaffold_377_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

22657..23133
DNA (477bp) protein (159aa)
Uncharacterized protein n=71 Tax=Clostridium difficile RepID=T3GP48_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22343.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_128_000G1_scaffold_377_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(23341..24483)
DNA (1143bp) protein (381aa)
Integrase n=176 Tax=Clostridium difficile RepID=C9XJT1_CLODC
integrase
Integrase {ECO:0000313|EMBL:CBE04934.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_128_000G1_scaffold_377_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24794..25171
DNA (378bp) protein (126aa)
Penicillinase repressor family protein n=213 Tax=Clostridium difficile RepID=C9XJT0_CLODC
regulatory protein
Transcriptional regulator, BlaI/MecI/CopY family {ECO:0000313|EMBL:EHJ29773.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_128_000G1_scaffold_377_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(25608..25871)
DNA (264bp) protein (88aa)
Uncharacterized protein n=166 Tax=Clostridium difficile RepID=Q188D1_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL22341.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_128_000G1_scaffold_377_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26187..26762
DNA (576bp) protein (192aa)
Uncharacterized protein n=210 Tax=Clostridium difficile RepID=Q188D2_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCK98420.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L3_128_000G1_scaffold_377_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26860..27858
DNA (999bp) protein (333aa)
Uncharacterized protein n=173 Tax=Clostridium difficile RepID=C9XJS7_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30273.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_128_000G1_scaffold_377_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28195..28833
DNA (639bp) protein (213aa)
Uncharacterized protein n=169 Tax=Clostridium difficile RepID=T3GK75_CLODC
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE63224.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_128_000G1_scaffold_377_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

28860..29759
DNA (900bp) protein (300aa)
Lipid kinase, YegS/Rv2252/BmrU family protein n=204 Tax=Clostridium difficile RepID=C9XJS5_CLODC
lipid kinase
Putative lipid kinase {ECO:0000313|EMBL:CCL30271.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_128_000G1_scaffold_377_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(29866..31530)
DNA (1665bp) protein (555aa)
glnS; Glutaminyl-tRNA synthetase (EC:6.1.1.18)
Glutamine--tRNA ligase {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00016670}; EC=6.1.1.18 {ECO:0000256|HAMAP-Rule:MF_00126, ECO:0000256|SAAS:SAAS00023088};; Glutaminyl-tRNA synthetase {ECO:0000256|HAMAP-Rule:MF_00126}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Glutamine--tRNA ligase n=179 Tax=Clostridium difficile RepID=SYQ_CLOD6
L3_128_000G1_scaffold_377_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

31822..32535
DNA (714bp) protein (238aa)
Uncharacterized protein n=109 Tax=Clostridium difficile RepID=Q188C4_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQE63226.1}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_128_000G1_scaffold_377_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

32691..33257
DNA (567bp) protein (189aa)
Uncharacterized protein n=211 Tax=Clostridium difficile RepID=C9XJS2_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CEJ98652.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_128_000G1_scaffold_377_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

33653..35353
DNA (1701bp) protein (567aa)
Uncharacterized protein n=174 Tax=Clostridium difficile RepID=Q188C6_CLOD6
hypothetical protein
Cell shape-determining protein {ECO:0000313|EMBL:CKH20299.1}; Putative membrane protein {ECO:0000313|EMBL:CEJ98651.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_128_000G1_scaffold_377_30
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

35523..36140
DNA (618bp) protein (206aa)
Uncharacterized protein n=214 Tax=Clostridium difficile RepID=Q188C3_CLOD6
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL30265.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Displaying items 1-30 of 189 in total

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