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L3_128_000G1_scaffold_414

Search features with annotation key words

Displaying items 1-30 of 87 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_414_1
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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544..657
DNA (114bp) protein (38aa)
Uncharacterized protein n=14 Tax=Clostridium difficile RepID=T3GBT9_CLODI
Uncharacterized protein {ECO:0000313|EMBL:EQF26099.1}; TaxID=1151292 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD160.;"
L3_128_000G1_scaffold_414_2
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

1075..3723
DNA (2649bp) protein (883aa)
DNA polymerase {ECO:0000256|RuleBase:RU004460}; EC=2.7.7.7 {ECO:0000256|RuleBase:RU004460};; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
polA; DNA polymerase I (POLI) (EC:2.7.7.7)
DNA polymerase n=70 Tax=Clostridium difficile RepID=G6BVV2_CLODI
L3_128_000G1_scaffold_414_3
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

3732..4334
DNA (603bp) protein (201aa)
coaE; dephospho-CoA kinase (EC:2.7.1.24)
Dephospho-CoA kinase (Dephosphocoenzyme A kinase) {ECO:0000313|EMBL:CAJ67981.1}; EC=2.7.1.24 {ECO:0000313|EMBL:CAJ67981.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Dephospho-CoA kinase n=162 Tax=Clostridium difficile RepID=T3HYZ9_CLODC
L3_128_000G1_scaffold_414_4
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4327..4881
DNA (555bp) protein (185aa)
Putative lytic transglycosylase-like protein {ECO:0000313|EMBL:CAJ67982.1}; EC=3.2.1.- {ECO:0000313|EMBL:CAJ67982.1};; TaxID=272563 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain 630) (Clostridium difficile).;"
Transglycosylase SLT domain protein n=204 Tax=Clostridium difficile RepID=G6BVV4_CLODI
transglycosylase
L3_128_000G1_scaffold_414_5
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

4881..6596
DNA (1716bp) protein (572aa)
Bacterial extracellular solute-binding s, 5 Middle family protein n=2 Tax=Clostridium difficile RepID=T4PNI8_CLODI
Putative solute-binding lipoprotein {ECO:0000313|EMBL:CCL21232.1}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
putative solute-binding lipoprotein
L3_128_000G1_scaffold_414_6
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

6669..6881
DNA (213bp) protein (71aa)
Heavy-metal-associated domain protein n=207 Tax=Clostridium difficile RepID=T3HVC2_CLODC
heavy-metal transport/detoxification protein
Putative heavy-metal transport/detoxification protein {ECO:0000313|EMBL:CCL29206.1}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_128_000G1_scaffold_414_7
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7082..7681
DNA (600bp) protein (200aa)
Uncharacterized protein n=212 Tax=Clostridium difficile RepID=C9XNK8_CLODC
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:CCL01060.1}; TaxID=1215061 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E10.;"
L3_128_000G1_scaffold_414_8
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

7909..8280
DNA (372bp) protein (124aa)
Lactoylglutathione lyase {ECO:0000313|EMBL:CCL29208.1}; EC=4.4.1.5 {ECO:0000313|EMBL:CCL29208.1};; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
Lactoylglutathione lyase n=186 Tax=Clostridium difficile RepID=C9XNK9_CLODC
lactoylglutathione lyase
L3_128_000G1_scaffold_414_9
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

8412..9686
DNA (1275bp) protein (425aa)
SH3 domain protein n=83 Tax=Clostridium difficile RepID=T2TLP1_CLODI
SH3 domain protein {ECO:0000313|EMBL:EQG77701.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
putative SH3-domain protein
L3_128_000G1_scaffold_414_10
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

9797..10741
DNA (945bp) protein (315aa)
Uncharacterized protein n=178 Tax=Clostridium difficile RepID=Q18AZ6_CLOD6
hypothetical protein
Uncharacterised protein {ECO:0000313|EMBL:CKG94734.1}; Uncharacterized protein {ECO:0000313|EMBL:CDS85784.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_128_000G1_scaffold_414_11
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

10957..12294
DNA (1338bp) protein (446aa)
Electron transport complex protein RnfC n=190 Tax=Clostridium difficile RepID=C9XNL2_CLODC
rnfC; electron transport complex protein
Electron transport complex subunit C {ECO:0000256|HAMAP-Rule:MF_00461}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_128_000G1_scaffold_414_12
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

12317..13294
DNA (978bp) protein (326aa)
Electron transport complex protein n=161 Tax=Clostridium difficile RepID=C9XNL3_CLODC
electron transport complex protein
Electron transport complex subunit D {ECO:0000256|HAMAP-Rule:MF_00462}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_128_000G1_scaffold_414_13
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13294..13863
DNA (570bp) protein (190aa)
Electron transport complex protein n=76 Tax=Clostridium difficile RepID=Q18AZ9_CLOD6
rnfG; Electron transport complex protein
Electron transport complex subunit G {ECO:0000256|HAMAP-Rule:MF_00479}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_128_000G1_scaffold_414_14
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

13876..14469
DNA (594bp) protein (198aa)
Electron transport complex protein n=216 Tax=Clostridium difficile RepID=C9XNL5_CLODC
rnfE; electron transport complex protein
Electron transport complex subunit E {ECO:0000256|HAMAP-Rule:MF_00478}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_128_000G1_scaffold_414_15
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

14484..15059
DNA (576bp) protein (192aa)
Electron transport complex protein n=181 Tax=Clostridium difficile RepID=C9XNL6_CLODC
rnfA; electron transport complex protein
Electron transport complex subunit A {ECO:0000256|HAMAP-Rule:MF_00459}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_128_000G1_scaffold_414_16
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

15075..16046
DNA (972bp) protein (324aa)
Electron transport complex protein n=177 Tax=Clostridium difficile RepID=Q18B01_CLOD6
rnfB; electron transport complex protein
Ferredoxin {ECO:0000313|EMBL:EHJ30645.1}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_128_000G1_scaffold_414_17
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16266..16850
DNA (585bp) protein (195aa)
Maf-like protein CD630_11430 n=200 Tax=Clostridium difficile RepID=Y1143_CLOD6
Maf-like protein
Maf-like protein HMPREF1122_02037 {ECO:0000256|HAMAP-Rule:MF_00528}; TaxID=997827 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 002-P50-2011.;"
L3_128_000G1_scaffold_414_18
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

16895..17554
DNA (660bp) protein (220aa)
UPF0758 protein CD630_11440 n=42 Tax=Clostridium difficile RepID=Y1144_CLOD6
radC; DNA repair protein RadC
DNA repair protein {ECO:0000313|EMBL:CKG94966.1}; DNA repair protein RadC homolog {ECO:0000313|EMBL:CEJ97714.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_128_000G1_scaffold_414_19
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

17624..18685
DNA (1062bp) protein (354aa)
Rod shape-determining protein n=211 Tax=Clostridium difficile RepID=C9XNM1_CLODC
mreB2; Rod shape-determining protein MreB
Rod shape-determining protein MreB {ECO:0000313|EMBL:EHJ26188.1}; TaxID=997828 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile 050-P50-2011.;"
L3_128_000G1_scaffold_414_20
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

18695..19588
DNA (894bp) protein (298aa)
Cell shape-determining protein MreC n=116 Tax=Clostridium difficile RepID=Q18B04_CLOD6
mreC; Rod shape-determining protein MreC
Cell shape-determining protein MreC {ECO:0000256|PIRNR:PIRNR038471}; Cell shape protein MreC {ECO:0000256|PIRNR:PIRNR038471}; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
L3_128_000G1_scaffold_414_21
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

19603..20091
DNA (489bp) protein (163aa)
Rod shape-determining protein MreD n=146 Tax=Clostridium difficile RepID=G6BVX1_CLODI
hypothetical protein
Putative membrane protein {ECO:0000313|EMBL:CBE03182.1}; TaxID=645463 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (strain R20291) (Clostridium difficile).;"
L3_128_000G1_scaffold_414_22
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

20103..23081
DNA (2979bp) protein (993aa)
penicillin-binding protein (EC:2.4.1.129)
Penicillin binding transpeptidase domain protein n=12 Tax=Clostridium difficile RepID=T2WN95_CLODI
Penicillin binding transpeptidase domain protein {ECO:0000313|EMBL:EQI87251.1}; TaxID=1151391 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile Y384.;"
L3_128_000G1_scaffold_414_23
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23179..23862
DNA (684bp) protein (228aa)
Probable septum site-determining protein MinC n=190 Tax=Clostridium difficile RepID=MINC_CLOD6
minC; Cell division regulator (septum placement)
Probable septum site-determining protein MinC {ECO:0000256|HAMAP-Rule:MF_00267}; TaxID=1151268 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile CD45.;"
L3_128_000G1_scaffold_414_24
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

23886..24683
DNA (798bp) protein (266aa)
Site-determining protein n=219 Tax=Clostridium difficile RepID=C9XNM6_CLODC
septum site-determining protein (cell division inhibitor)
Site-determining protein {ECO:0000256|PIRNR:PIRNR003092}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L3_128_000G1_scaffold_414_25
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

24701..24985
DNA (285bp) protein (95aa)
Cell division topological specificity factor n=219 Tax=Clostridium difficile RepID=MINE_CLOD6
cell division topological specificity factor MinE
Cell division topological specificity factor {ECO:0000256|HAMAP-Rule:MF_00262, ECO:0000256|SAAS:SAAS00085645}; TaxID=1215069 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile E15.;"
L3_128_000G1_scaffold_414_26
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25070..26200
DNA (1131bp) protein (377aa)
Rod shape-determining protein n=25 Tax=Clostridium difficile RepID=C9XNM8_CLODC
rod shape-determining protein
Rod shape-determining protein {ECO:0000313|EMBL:CKG95238.1}; Rod shape-determining protein MrdB {ECO:0000313|EMBL:CEJ97722.1}; TaxID=1496 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile (Clostridium difficile).;"
L3_128_000G1_scaffold_414_27
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

26241..26654
DNA (414bp) protein (138aa)
Methylglyoxal synthase {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089917}; Short=MGS {ECO:0000256|HAMAP-Rule:MF_00549};; EC=4.2.3.3 {ECO:0000256|HAMAP-Rule:MF_00549, ECO:0000256|SAAS:SAAS00089921};; TaxID=1215067 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T15.;"
Methylglyoxal synthase n=204 Tax=Clostridium difficile RepID=MGSA_CLOD6
mgsA; methylglyoxal synthase
L3_128_000G1_scaffold_414_28
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27138..27467
DNA (330bp) protein (110aa)
PadR-family transcriptional regulator n=185 Tax=Clostridium difficile RepID=C9XNN0_CLODC
PadR family transcriptional regulator
Transcriptional regulator, PadR family {ECO:0000313|EMBL:CCK89940.1}; TaxID=1215059 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile T5.;"
L3_128_000G1_scaffold_414_29
Peptoclostridium difficile, Peptoclostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

27471..28262
DNA (792bp) protein (264aa)
Uncharacterized protein n=134 Tax=Clostridium difficile RepID=Q18B14_CLOD6
conserved hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EQG77482.1}; TaxID=1151334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Peptoclostridium.;" source="Peptoclostridium difficile DA00165.;"
L3_128_000G1_scaffold_414_30
unknown

Not on your lists

28479..28592
DNA (114bp) protein (38aa)

This feature has no annotations

Displaying items 1-30 of 87 in total

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