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L3_128_000G1_scaffold_532

Search features with annotation key words

Displaying items 1-30 of 80 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_532_1

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2..1147
DNA (1146bp) protein (382aa)
RHS repeat-associated core domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0AE04_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16910.1}; Flags: Fragment;; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
RHS repeat-associated core domain-containing protein
L3_128_000G1_scaffold_532_2

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1163..1765
DNA (603bp) protein (201aa)
Uncharacterized protein {ECO:0000313|EMBL:ETJ16911.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
L3_128_000G1_scaffold_532_3

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comp(2311..2940)
DNA (630bp) protein (210aa)
Transposase (Fragment) n=1 Tax=Clostridium sp. Maddingley MBC34-26 RepID=K6TCU1_9CLOT
Transposase IS66 {ECO:0000313|EMBL:ETJ16912.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
transposase
L3_128_000G1_scaffold_532_4
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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3222..4817
DNA (1596bp) protein (532aa)
recQ; ATP-dependent DNA helicase (EC:3.6.1.-)
ATP-dependent DNA helicase RecQ n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XD90_9CLOT
ATP-dependent DNA helicase RecQ {ECO:0000313|EMBL:CDA10354.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_128_000G1_scaffold_532_5
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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5008..5943
DNA (936bp) protein (312aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X3U9_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:CDA10353.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_128_000G1_scaffold_532_6
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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6144..6962
DNA (819bp) protein (273aa)
Formate dehydrogenase family accessory protein FdhD n=2 Tax=Clostridiales RepID=B0A8P5_9FIRM
Protein FdhD homolog {ECO:0000256|HAMAP-Rule:MF_00187, ECO:0000256|SAAS:SAAS00093832}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
fdhD; formate dehydrogenase accessory protein
L3_128_000G1_scaffold_532_7
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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7118..8206
DNA (1089bp) protein (363aa)
Glycerol dehydrogenase and related enzymes (EC:1.1.1.6)
Alcohol dehydrogenase iron-dependent n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XNJ3_9CLOT
Alcohol dehydrogenase iron-dependent {ECO:0000313|EMBL:CDA10351.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_128_000G1_scaffold_532_8

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8362..8775
DNA (414bp) protein (138aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A8P3_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETJ16917.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_128_000G1_scaffold_532_9

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8782..9654
DNA (873bp) protein (291aa)
Uncharacterized protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XD87_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ETJ16918.1}; TaxID=408170 species="unclassified sequences; metagenomes; organismal metagenomes.;" source="human gut metagenome.;"
hypothetical protein
L3_128_000G1_scaffold_532_10
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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9620..10384
DNA (765bp) protein (255aa)
DnaJ domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X3U2_9CLOT
DnaJ domain protein {ECO:0000313|EMBL:CDA10348.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
DnaJ-class molecular chaperone with C-terminal Zn finger domain
L3_128_000G1_scaffold_532_11
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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10409..12151
DNA (1743bp) protein (581aa)
Chaperone protein DnaK n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y0X8_9CLOT
Chaperone protein DnaK {ECO:0000256|HAMAP-Rule:MF_00332}; HSP70 {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock 70 kDa protein {ECO:0000256|HAMAP-Rule:MF_00332}; Heat shock protein 70 {ECO:0000256|HAMAP-Rule:MF_00332}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
chaperone protein DnaK
L3_128_000G1_scaffold_532_12
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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12584..13552
DNA (969bp) protein (323aa)
Methionine import ATP-binding protein MetN {ECO:0000256|HAMAP-Rule:MF_01719}; EC=3.6.3.- {ECO:0000256|HAMAP-Rule:MF_01719};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
metN; ABC-type transport system, methionine-specificATP-binding protein (EC:3.6.3.-)
ABC transporter, ATP-binding protein n=2 Tax=Clostridiales RepID=B0A8N9_9FIRM
L3_128_000G1_scaffold_532_13
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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13542..14207
DNA (666bp) protein (222aa)
ABC transporter, permease protein n=2 Tax=Clostridiales RepID=B0A8N8_9FIRM
ABC transporter, permease protein {ECO:0000313|EMBL:EDQ97245.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
metI; D-methionine ABC transporter permease
L3_128_000G1_scaffold_532_14
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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14273..15073
DNA (801bp) protein (267aa)
Lipoprotein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XD83_9CLOT
Lipoprotein {ECO:0000256|PIRNR:PIRNR002854}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
metQ; D-methionine ABC transporter substrate-binding protein
L3_128_000G1_scaffold_532_15
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(15149..16069)
DNA (921bp) protein (307aa)
exopolyphosphatase (EC:3.6.1.40 3.6.1.11)
Ppx/GppA phosphatase family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X3T6_9CLOT
Ppx/GppA phosphatase family protein {ECO:0000313|EMBL:CDA10343.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_128_000G1_scaffold_532_16
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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16330..18447
DNA (2118bp) protein (706aa)
Polyphosphate kinase {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800}; EC=2.7.4.1 {ECO:0000256|HAMAP-Rule:MF_00347, ECO:0000256|RuleBase:RU003800};; ATP-polyphosphate phosphotransferase {ECO:0000256|HAMAP-Rule:MF_00347}; Polyphosphoric acid kinase {ECO:0000256|HAMAP-Rule:MF_00347}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ppk; polyphosphate kinase Ppk (EC:2.7.4.1)
Polyphosphate kinase n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y0X1_9CLOT
L3_128_000G1_scaffold_532_17
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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18457..19137
DNA (681bp) protein (227aa)
Response regulator receiver domain protein n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8N4_9FIRM
Response regulator receiver domain protein {ECO:0000313|EMBL:EDQ97241.1}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
two-component response regulator
L3_128_000G1_scaffold_532_18
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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19187..20494
DNA (1308bp) protein (436aa)
Histidine kinase {ECO:0000256|SAAS:SAAS00251121}; EC=2.7.13.3 {ECO:0000256|SAAS:SAAS00251121};; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
ATPase/histidine kinase/DNA gyrase B/HSP90 domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X6C3_9CLOT
two-component sensor histidine kinase
L3_128_000G1_scaffold_532_19
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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20773..21618
DNA (846bp) protein (282aa)
Phosphate binding protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5X3T1_9CLOT
Phosphate binding protein {ECO:0000313|EMBL:CDA10338.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
putative phosphate ABC transporter, substrate-binding protein
L3_128_000G1_scaffold_532_20
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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21708..22628
DNA (921bp) protein (307aa)
Phosphate ABC transporter permease protein PstC n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y0W7_9CLOT
Phosphate ABC transporter permease protein PstC {ECO:0000313|EMBL:CDA10337.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
phosphate ABC transporter permease
L3_128_000G1_scaffold_532_21
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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22628..23470
DNA (843bp) protein (281aa)
Phosphate ABC transporter permease protein PstA n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XNI1_9CLOT
Phosphate ABC transporter permease protein PstA {ECO:0000313|EMBL:CDA10336.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
pstA; phosphate-specific ABC transporter permease
L3_128_000G1_scaffold_532_22
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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23572..24336
DNA (765bp) protein (255aa)
Phosphate import ATP-binding protein PstB {ECO:0000256|HAMAP-Rule:MF_01702}; EC=3.6.3.27 {ECO:0000256|HAMAP-Rule:MF_01702};; ABC phosphate transporter {ECO:0000256|HAMAP-Rule:MF_01702}; Phosphate-transporting ATPase {ECO:0000256|HAMAP-Rule:MF_01702}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
UPI0003D67C0A related cluster n=1 Tax=unknown RepID=UPI0003D67C0A
phoT; phosphate transporter ATP-binding protein
L3_128_000G1_scaffold_532_23
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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24388..25044
DNA (657bp) protein (219aa)
Phosphate-specific transport system accessory protein PhoU n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8M8_9FIRM
Phosphate-specific transport system accessory protein PhoU {ECO:0000256|PIRNR:PIRNR003107}; TaxID=445973 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DSM 16795.;"
phosphate transport system protein
L3_128_000G1_scaffold_532_24
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

25302..26669
DNA (1368bp) protein (456aa)
UPI0003D5A6A1 related cluster n=1 Tax=unknown RepID=UPI0003D5A6A1
Uncharacterized protein {ECO:0000313|EMBL:ETI94255.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
hypothetical protein
L3_128_000G1_scaffold_532_25
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(26764..27309)
DNA (546bp) protein (182aa)
BioY family protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y0W2_9CLOT
BioY family protein {ECO:0000313|EMBL:CDA10332.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
biotin biosynthesis protein
L3_128_000G1_scaffold_532_26
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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27565..28353
DNA (789bp) protein (263aa)
Uncharacterized protein n=2 Tax=Clostridiales RepID=B0A8M5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDA10331.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
hypothetical protein
L3_128_000G1_scaffold_532_27
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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28912..29733
DNA (822bp) protein (274aa)
sorbitol-6-phosphate 2-dehydrogenase (EC:1.1.1.140)
Oxidoreductase, short chain dehydrogenase/reductase family protein n=2 Tax=Clostridiales RepID=B0A8M4_9FIRM
Oxidoreductase short chain dehydrogenase/reductase family protein {ECO:0000313|EMBL:CDA10330.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
L3_128_000G1_scaffold_532_28
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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29754..31685
DNA (1932bp) protein (644aa)
PRD domain protein n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5XD72_9CLOT
PRD domain protein {ECO:0000313|EMBL:CDA10329.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
transcriptional antiterminator, BglG
L3_128_000G1_scaffold_532_29
Intestinibacter bartlettii, Intestinibacter, Clostridiales, Clostridia, Firmicutes, Bacteria

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31705..32151
DNA (447bp) protein (149aa)
Glucitol operon activator protein (GutM) n=1 Tax=Clostridium bartlettii DSM 16795 RepID=B0A8M2_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:ETI96605.1}; TaxID=1403940 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Peptostreptococcaceae; Intestinibacter.;" source="Intestinibacter bartlettii DORA_8_9.;"
glucitol operon activator
L3_128_000G1_scaffold_532_30
Clostridium bartlettii CAG:1329, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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32164..32712
DNA (549bp) protein (183aa)
PTS system glucitol/sorbitol-specific IIC component n=1 Tax=Clostridium bartlettii CAG:1329 RepID=R5Y0V6_9CLOT
PTS system glucitol/sorbitol-specific IIC component {ECO:0000313|EMBL:CDA10327.1}; TaxID=1263063 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium; environmental samples.;" source="Clostridium bartlettii CAG:1329.;"
PTS system, glucitol/sorbitol-specific, IIC subunit
Displaying items 1-30 of 80 in total

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