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L3_128_000G1_scaffold_4525

Search features with annotation key words

Displaying items 1-30 of 32 in total
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_4525_1
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(73..375)
DNA (303bp) protein (101aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB8_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT14067.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
hypothetical protein
L3_128_000G1_scaffold_4525_2
Subdoligranulum variabile, Subdoligranulum, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(418..1077)
DNA (660bp) protein (220aa)
head protein n=1 Tax=Bacillus sp. AP8 RepID=UPI0002D5AF01
Uncharacterized protein {ECO:0000313|EMBL:EFB74813.1}; TaxID=411471 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; Subdoligranulum.;" source="Subdoligranulum variabile DSM 15176.;"
head protein
L3_128_000G1_scaffold_4525_3
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1096..1440)
DNA (345bp) protein (115aa)
Phage minor structural GP20 n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BW33_CLOPF
Phage minor structural GP20 {ECO:0000313|EMBL:EDT14099.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phage minor structural GP20
L3_128_000G1_scaffold_4525_4
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(1406..1645)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB6_CLOPF
Phage minor structural GP20 {ECO:0000313|EMBL:EDT14099.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
scaffold protein
L3_128_000G1_scaffold_4525_5
unknown

Not on your lists

comp(1763..2278)
DNA (516bp) protein (172aa)

This feature has no annotations

L3_128_000G1_scaffold_4525_6
Bacillus azotoformans, Bacillus, Bacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(2301..2576)
DNA (276bp) protein (92aa)
Uncharacterized protein {ECO:0000313|EMBL:KEF40421.1}; TaxID=1348973 species="Bacteria; Firmicutes; Bacilli; Bacillales; Bacillaceae; Bacillus.;" source="Bacillus azotoformans MEV2011.;"
L3_128_000G1_scaffold_4525_7
Clostridium chauvoei, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(2669..3850)
DNA (1182bp) protein (394aa)
Putative minor head protein n=1 Tax=Clostridium chauvoei JF4335 RepID=S6ELK7_9CLOT
Putative minor head protein {ECO:0000313|EMBL:CDG02107.1}; TaxID=1351755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium chauvoei JF4335.;"
phage minor head protein
L3_128_000G1_scaffold_4525_8
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(3840..5279)
DNA (1440bp) protein (480aa)
Phage portal protein, SPP1 family n=1 Tax=Clostridium perfringens E str. JGS1987 RepID=B1BW27_CLOPF
Phage portal protein, SPP1 family {ECO:0000313|EMBL:EDT14065.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
phage portal protein, SPP1 family
L3_128_000G1_scaffold_4525_9
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(5294..6496)
DNA (1203bp) protein (401aa)
PBSX family phage terminase, large subunit n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPB1_CLOPF
Phage terminase, large subunit, pbsx family {ECO:0000313|EMBL:EDS80608.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
terminase
L3_128_000G1_scaffold_4525_10
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(6480..6920)
DNA (441bp) protein (147aa)
Phage terminase, small subunit n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSJ5_CLOP1
phage terminase small subunit
Phage terminase, small subunit {ECO:0000313|EMBL:EDT22489.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_128_000G1_scaffold_4525_11
unknown

Not on your lists

comp(6989..7213)
DNA (225bp) protein (75aa)

This feature has no annotations

L3_128_000G1_scaffold_4525_12
Eubacterium rectale CAG:36, Eubacterium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(7359..8021)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Eubacterium rectale CAG:36 RepID=R6TBH5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:CDC70768.1}; TaxID=1263079 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Eubacteriaceae; Eubacterium; environmental samples.;" source="Eubacterium rectale CAG:36.;"
L3_128_000G1_scaffold_4525_13
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(8706..9635)
DNA (930bp) protein (310aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CTU3_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA18095.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
L3_128_000G1_scaffold_4525_14
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(9731..10204)
DNA (474bp) protein (158aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSJ7_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT22163.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_128_000G1_scaffold_4525_15
unknown

Not on your lists

comp(10490..10663)
DNA (174bp) protein (58aa)

This feature has no annotations

L3_128_000G1_scaffold_4525_16
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(10770..11162)
DNA (393bp) protein (131aa)
Endodeoxyribonuclease RusA family protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSJ9_CLOP1
endodeoxyribonuclease RusA
Endodeoxyribonuclease RusA family protein {ECO:0000313|EMBL:EDS81410.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_000G1_scaffold_4525_17
Clostridium pasteurianum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11172..11465)
DNA (294bp) protein (98aa)
Uncharacterized protein n=1 Tax=Clostridium pasteurianum BC1 RepID=R4K475_CLOPA
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:AGK97388.1}; TaxID=86416 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium pasteurianum BC1.;"
L3_128_000G1_scaffold_4525_18
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(11459..11632)
DNA (174bp) protein (58aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CW74_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EIA17027.1}; TaxID=883064 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens F262.;"
hypothetical protein
L3_128_000G1_scaffold_4525_19
Lactobacillus pentosus, Lactobacillus, Lactobacillales, Bacilli, Firmicutes, Bacteria

Not on your lists

comp(11655..12410)
DNA (756bp) protein (252aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPA2_CLOPF
Phage replication initiation protein {ECO:0000313|EMBL:EIW14290.1}; TaxID=1136177 species="Bacteria; Firmicutes; Bacilli; Lactobacillales; Lactobacillaceae; Lactobacillus.;" source="Lactobacillus pentosus KCA1.;"
hypothetical protein
L3_128_000G1_scaffold_4525_20
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12439..12627)
DNA (189bp) protein (63aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPA1_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS79221.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_000G1_scaffold_4525_21
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(12640..13212)
DNA (573bp) protein (191aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CPA0_CLOPF
ERF superfamily protein {ECO:0000313|EMBL:AIY80150.1}; TaxID=1415774 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum 202F.;"
essential recombination function protein
L3_128_000G1_scaffold_4525_22
Clostridium phage phiCP39-O, Caudovirales, Viruses

Not on your lists

comp(13222..13719)
DNA (498bp) protein (166aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CP99_CLOPF
Gp157 {ECO:0000313|EMBL:ACE82029.1}; TaxID=541865 species="Viruses; dsDNA viruses, no RNA stage; Caudovirales; Siphoviridae.;" source="Clostridium phage phiCP39-O.;"
siphovirus Gp157 family protein
L3_128_000G1_scaffold_4525_23
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13733..13972)
DNA (240bp) protein (80aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CP98_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDS81390.1}; TaxID=445334 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens C str. JGS1495.;"
L3_128_000G1_scaffold_4525_24
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(13984..14166)
DNA (183bp) protein (61aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens B str. ATCC 3626 RepID=B1RC87_CLOPF
Uncharacterized protein {ECO:0000313|EMBL:EDT22154.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
hypothetical protein
L3_128_000G1_scaffold_4525_25
unknown

Not on your lists

comp(14157..14264)
DNA (108bp) protein (36aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CP96_CLOPF
L3_128_000G1_scaffold_4525_26
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14261..14443)
DNA (183bp) protein (61aa)
Putative uncharacterized protein n=2 Tax=Clostridium perfringens RepID=Q0TSK6_CLOP1
hypothetical protein
Uncharacterized protein {ECO:0000313|EMBL:EDT16298.1}; TaxID=451755 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens E str. JGS1987.;"
L3_128_000G1_scaffold_4525_27
Clostridium perfringens, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14454..14633)
DNA (180bp) protein (60aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens (strain ATCC 13124 / NCTC 8237 / Type A) RepID=Q0TSK7_CLOP1
hypothetical protein
Conserved domain protein {ECO:0000313|EMBL:EDT22801.1}; TaxID=451754 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium perfringens B str. ATCC 3626.;"
L3_128_000G1_scaffold_4525_28
Clostridium botulinum, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14635..14982)
DNA (348bp) protein (116aa)
Putative uncharacterized protein n=1 Tax=Clostridium perfringens WAL-14572 RepID=H1CP93_CLOPF
hypothetical protein
Histidine kinase {ECO:0000313|EMBL:KEH96872.1}; TaxID=1443125 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium botulinum C/D str. BKT12695.;"
L3_128_000G1_scaffold_4525_29
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(14998..15762)
DNA (765bp) protein (255aa)
Phage antirepressor KilAC domain protein n=5 Tax=Clostridium difficile RepID=T2V8J1_CLODI
phage antirepressor KilAC domain protein
Phage antirepressor KilAC domain protein {ECO:0000313|EMBL:AIY82643.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
L3_128_000G1_scaffold_4525_30
Clostridium baratii, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

Not on your lists

comp(15782..15991)
DNA (210bp) protein (70aa)
Uncharacterized protein n=1 Tax=Clostridium perfringens F262 RepID=H7CW88_CLOPF
helix-turn-helix domain of resolvase family protein
Helix-turn-helix domain of resolvase family protein {ECO:0000313|EMBL:AIY84690.1}; TaxID=1415775 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium baratii str. Sullivan.;"
Displaying items 1-30 of 32 in total

View Taxonomy