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L3_128_000G1_scaffold_5152

Search features with annotation key words

Displaying 12 items
*intergenic gaps > 150 nt are marked
name lists location/seqs annotations notes
L3_128_000G1_scaffold_5152_1
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(2..688)
DNA (687bp) protein (229aa)
trxB; thioredoxin reductase (EC:1.8.1.9)
Thioredoxin reductase (NADPH) n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XDG9_9FIRM
Thioredoxin reductase (NADPH) {ECO:0000313|EMBL:EGJ46865.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_5152_2
Burkholderia cepacia, Burkholderia, Burkholderiales, Betaproteobacteria, Proteobacteria, Bacteria

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comp(779..1732)
DNA (954bp) protein (318aa)
Threonine dehydratase n=1 Tax=Firmicutes bacterium CAG:103 RepID=R5AXN0_9FIRM
Pyridoxal-phosphate dependent enzyme family protein {ECO:0000313|EMBL:AIO22414.1}; TaxID=983594 species="Bacteria; Proteobacteria; Betaproteobacteria; Burkholderiales; Burkholderiaceae; Burkholderia; Burkholderia cepacia complex.;" source="Burkholderia cepacia ATCC 25416.;"
ilvA; threonine dehydratase
L3_128_000G1_scaffold_5152_3
Clostridium sp. ATCC BAA-442, Clostridium, Clostridiales, Clostridia, Firmicutes, Bacteria

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2237..3163
DNA (927bp) protein (309aa)
Uncharacterized protein (Fragment) n=1 Tax=Clostridium sp. ATCC BAA-442 RepID=U2D795_9CLOT
Uncharacterized protein {ECO:0000313|EMBL:ERI75396.1}; Flags: Fragment;; TaxID=649724 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Clostridiaceae; Clostridium.;" source="Clostridium sp. ATCC BAA-442.;"
L3_128_000G1_scaffold_5152_4
unknown

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3209..3421
DNA (213bp) protein (71aa)

This feature has no annotations

L3_128_000G1_scaffold_5152_5
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3478..3705)
DNA (228bp) protein (76aa)
Preprotein translocase, SecG subunit n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGU4_9FIRM
Preprotein translocase, SecG subunit {ECO:0000313|EMBL:EGJ45583.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
secG; preprotein translocase SecG subunit
L3_128_000G1_scaffold_5152_6
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(3855..4232)
DNA (378bp) protein (126aa)
TdcF protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGU3_9FIRM
TdcF protein {ECO:0000313|EMBL:EGJ45582.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
endoribonuclease L-PSP
L3_128_000G1_scaffold_5152_7
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(4311..5192)
DNA (882bp) protein (294aa)
YihY family inner membrane protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGZ2_9FIRM
YihY family inner membrane protein {ECO:0000313|EMBL:EGJ45631.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Inner membrane protein YihY, formerly thought to be RNase BN
L3_128_000G1_scaffold_5152_8
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(5311..5574)
DNA (264bp) protein (88aa)
30S ribosomal protein S20 n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGZ1_9FIRM
30S ribosomal protein S20 {ECO:0000256|HAMAP-Rule:MF_00500}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
rpsT; 30S ribosomal protein S20
L3_128_000G1_scaffold_5152_9
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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5810..6700
DNA (891bp) protein (297aa)
Germination protease {ECO:0000256|HAMAP-Rule:MF_00626}; EC=3.4.24.78 {ECO:0000256|HAMAP-Rule:MF_00626};; GPR endopeptidase {ECO:0000256|HAMAP-Rule:MF_00626}; Germination proteinase {ECO:0000256|HAMAP-Rule:MF_00626}; Spore protease {ECO:0000256|HAMAP-Rule:MF_00626}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
gpr; putative germination protease (EC:3.4.24.78)
Germination protease n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XGY9_9FIRM
L3_128_000G1_scaffold_5152_10
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(6940..8043)
DNA (1104bp) protein (368aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XET5_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45955.2}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
L3_128_000G1_scaffold_5152_11
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(8497..9159)
DNA (663bp) protein (221aa)
Uncharacterized protein n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XET0_9FIRM
Uncharacterized protein {ECO:0000313|EMBL:EGJ45950.1}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
metal dependent phosphohydrolase
L3_128_000G1_scaffold_5152_12
Ruminococcaceae bacterium D16, Clostridiales, Clostridia, Firmicutes, Bacteria

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comp(9362..10276)
DNA (915bp) protein (305aa)
Homoserine O-succinyltransferase {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084556}; EC=2.3.1.46 {ECO:0000256|HAMAP-Rule:MF_00295, ECO:0000256|SAAS:SAAS00084596};; Homoserine O-transsuccinylase {ECO:0000256|HAMAP-Rule:MF_00295}; TaxID=552398 species="Bacteria; Firmicutes; Clostridia; Clostridiales; Ruminococcaceae; unclassified Ruminococcaceae.;" source="Ruminococcaceae bacterium D16.;"
Homoserine O-succinyltransferase n=1 Tax=Ruminococcaceae bacterium D16 RepID=F4XES9_9FIRM
homoserine O-succinyltransferase
Displaying 12 items

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